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Report for CCDS93679.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
93679.1 Public Homo sapiens 4 SORBS2 24 110 108 CCDS HistoryNCBI Gene:8470Re-query CCDS DB by CCDS ID:93679.1Re-query CCDS DB by GeneID:8470See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)


Attributes
Inferred exon combination

Sequence IDs included in CCDS 93679.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000695409.1 ENSP00000511888.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000695409.1Link to Ensembl Protein Viewer:ENSP00000511888.1Re-query CCDS DB by Nucleotide ID:ENST00000695409Re-query CCDS DB by Protein ID:ENSP00000511888
Original member Current member NCBI NM_001395207.1 NP_001382136.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001395207.1Link to Protein Sequence:NP_001382136.1Re-query CCDS DB by Nucleotide ID:NM_001395207Re-query CCDS DB by Protein ID:NP_001382136Link to BLAST:NP_001382136.1

Chromosomal Locations for CCDS 93679.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 4 (NC_000004.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 185587627 185587688 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 185589679 185589785 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 185593886 185593935 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 185611780 185611980 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 185614831 185614959 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 185615045 185615159 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 185618585 185618631 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 185620063 185620151 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 185622914 185624494 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 185626832 185627019 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 185630549 185630598 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 185635355 185635411 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 185638079 185638162 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 185638877 185639035 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 185646668 185646782 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 185649467 185649656 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 185651784 185651828 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 185652662 185652728 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 185657424 185657596 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 185662104 185662242 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 185678423 185678547 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 185678796 185678822 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 185684754 185684846 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 185690562 185690571 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3903 nt):
ATGAACACAGATAGCGGTGGGTGTGCTCGCAAACGTGCCGCCATGTCTGTTACGCTAACATCTGTGAAGA
GAGTGCAAAGTTCTCCAAACCTATTGGCTGCAGGGCGTGATTCTCAGTCACCAGACTCAGCTTGGAGATC
TTACAATGATGGCAATCAGGAGACACTGAACGGAGATGCTACATATTCCTCTCTTGCAGCAAAAGGTTTT
AGAAGCGTTCGACCAAACCTACAAGATAAAAGATCACCAACTCAGAGCCAGATAACAGTGAATGGAAACT
CAGGAGGTGCCGTGAGTCCCATGAGTTACTATCAGAGGCCGTTTTCCCCCTCGGCATATTCTCTCCCAGC
CTCACTCAACTCCAGCATTGTCATGCAGCACGGCACATCCCTCGATTCCACAGACACATATCCCCAGCAT
GCGCAGTCTCTGGATGGCACCACCAGCAGCTCTATCCCCCTGTACCGATCCTCAGAGGAAGAGAAGAGAG
TGACAGTCATCAAAGCCCCGCATTACCCAGGGATCGGGCCCGTGGATGAATCCGGAATCCCCACAGCAAT
TAGAACGACAGTCGACCGGCCCAAGGACTGGTACAAGACGATGTTTAAGCAAATTCACATGGTGCACAAG
CCGGATGATGACACAGACATGTATAATACTCCTTATACATACAATGCAGGTCTGTACAACCCACCCTACA
GTGCTCAGTCACACCCTGCTGCAAAGACCCAAACCTACAGACCTCTTTCCAAAAGCCACTCCGACAACAG
CCCCAATGCCTTTAAGGATGCGTCCTCCCCAGTGCCTCCCCCACATGTTCCACCTCCAGTCCCGCCGCTT
CGACCAAGAGATCGGTCTTCAACAGAAAAGCATGACTGGGATCCTCCAGACAGAAAAGTGGACACAAGAA
AATTTCGGTCTGAGCCAAGGAGTATTTTTGAATATGAACCTGGCAAGTCATCAATTCTTCAGCATGAAAG
ACCACCCCCTCTCCCAACAACTCCGACACCTGTTCCAAGGGAACCTGGCCGGAAGCCTCTTTCTAGCTCC
CGACTCGGAGAAGTCACTGGTAGCCCCTCCCCTCCGCCCCGGAGTGGCGCCCCCACACCAAGCTCGCGCG
CCCCGGCTCTGTCTCCCACCCGGACTGATCGCATAAATCCAGATGACATAGATTTAGAAAATGAGCCCTG
GTATAAATTCTTTTCAGAACTGGAGTTTGGACGCCCGCCTCCTAAAAAGCCTCTGGACTATGTTCAAGAT
CATTCTTCTGGTGTTTTCAATGAGGCCTCCTTGTATCAGTCCTCTATAGACAGAAGCCTGGAAAGACCCA
TGAGTTCTGCAAGCATGGCCAGTGACTTCAGGAAGCGGAGGAAGAGCGAGCCTGCAGTGGGTCCACCACG
GGGCTTGGGAGATCAAAGTGCGAGCAGGACTAGCCCAGGCCGAGTGGACCTCCCAGGATCAAGCACCACT
CTTACAAAGTCTTTCACTAGCTCTTCTCCTTCTTCCCCATCAAGAGCAAAAGGTGGGGATGATAGCAAAA
TATGTCCATCCCTTTGCAGTTACTCAGGGCTCAACGGCAACCCCTCCAGTGAGTTAGATTACTGTAGCAC
TTACAGACAGCACTTGGATGTCCCTCGGGACTCACCAAGAGCCATTAGTTTCAAGAACGGCTGGCAAATG
GCCCGGCAAAACGCAGAAATCTGGAGCAGCACGGAAGAAACCGTCTCTCCCAAAATCAAATCCCGGAGCT
GTGACGATCTCCTAAACGACGACTGCGATAGCTTCCCGGACCCGAAAGTCAAGTCGGAAAGCATGGGCTC
CCTGTTATGTGAGGAGGACTCCAAGGAGAGCTGCCCCATGGCGTGGGGGTCCCCCTACGTCCCGGAGGTT
CGCAGTAACGGCAGATCAAGGATCAGACACAGGTCAGCCCGCAACGCCCCGGGGTTCCTGAAGATGTACA
AGAAAATGCACCGCATCAACCGCAAGGACCTGATGAACTCCGAGGTGATCTGCTCCGTGAAGTCCAGGAT
TCTGCAGTACGAGAGCGAGCAGCAGCACAAGGACCTGCTGCGCGCCTGGAGCCAGTGCTCCACGGAGGAG
GTGCCCCGGGACATGGTGCCCACACGCATCTCCGAATTCGAAAAGCTGATCCAGAAGTCCAAATCCATGC
CAAATTTAGGGGATGACATGCTGTCTCCCGTAACCCTAGAACCACCGCAAAATGGCCTATGTCCCAAGAG
GCGGTTTTCCATTGAGTATTTGCTGGAGGAAGAAAATCAAAGCGGCCCCCCCGCTCGGGGCCGGCGAGGC
TGCCAGTCTAACGCCCTGGTGCCCATTCACATTGAAGTCACCAGCGATGAGCAGCCCCGAGCACACGTGG
AGTTTTCCGACAGCGACCAGGACGGGGTTGTGTCCGACCACAGTGACTACATTCACCTAGAGGGGTCATC
CTTCTGCAGTGAAAGTGACTTTGATCACTTTTCCTTCACATCCTCCGAAAGCTTTTACGGATCCAGCCAC
CACCACCACCATCACCACCACCACCACCACCGCCACCTCATCAGCTCCTGCAAAGGCAGGTGCCCGGCCT
CCTACACTCGATTTACCACAATGTTAAAACACGAAAGAGCCAGACACGAAAACACCGAGGAGCCCAGAAG
GCAAGAAATGGACCCTGGCCTTTCTAAACTTGCTTTTCTAGTCAGTCCTGTGCCTTTCCGGAGGAAAAAA
AATTCGGCTCCTAAGAAACAGACTGAAAAGGCAAAATGTAAAGCATCTGTGTTTGAGGCTCTGGACTCTG
CCCTTAAAGACATCTGTGACCAAATTAAAGCTGAAAAGAAAAGGGGGAGCTTGCCGGACAACAGCATCCT
GCACCGCCTCATCAGTGAGCTGCTGCCAGATGTTCCCGAGAGGAACTCATCCCTGAGAGCGCTGAGGAGG
AGCCCCCTGCACCAGCCTCTCCACCCACTGCCTCCCGATGGTGCTATTCATTGTCCACCCTACCAGAATG
ACTGCGGGAGAATGCCCCGCAGTGCCTCTTTCCAAGACGTGGACACAGCCAACAGCAGCTGCCACCACCA
AGACCGTGGCGGTGCACTCCAAGACCGTGAGTCCCCTAGAAGTTACTCATCCACTTTGACTGACATGGGG
AGAAGTGCACCAAGGGAAAGAAGAGGAACTCCAGAAAAAGAGAAATTGCCTGCAAAAGCTGTTTATGATT
TTAAGGCTCAGACATCTAAGGAGTTGTCATTTAAGAAAGGAGATACTGTCTACATCCTCAGGAAAATTGA
TCAAAATTGGTATGAGGGAGAACACCACGGGAGAGTGGGCATCTTCCCGATCTCATACGTAGAGAAACTC
ACACCTCCTGAGAAAGCACAGCCTGCAAGACCACCTCCGCCAGCCCAGCCCGGAGAAATCGGAGAAGCTA
TAGCCAAATACAACTTCAACGCAGACACAAATGTGGAGCTGTCACTGAGAAAGGGAGATAGAGTTATTCT
TCTTAAAAGAGTTGATCAAAACTGGTATGAAGGTAAAATCCCAGGAACCAACAGACAAGGCATCTTCCCT
GTTTCCTATGTGGAGGTCGTCAAGAAGAACACAAAAGGTGCTGAGGACTACCCTGACCCTCCAATACCCC
ACAGCTATTCTAGTGATAGGATTCACAGCTTGAGCTCAAATAAGCCACAGCGTCCTGTGTTTACTCATGA
AAATATTCAAGGTGGGGGGGAACCGTTTCAGGCTCTGTATAACTATACTCCCAGGAATGAAGATGAGCTG
GAGCTCAGAGAAAGTGATGTCATTGATGTCATGGAAAAGTGTGATGACGGCTGGTTTGTGGGGACCTCAA
GAAGAACCAAATTCTTTGGTACTTTCCCCGGAAACTACGTCAAGAGGCTGTGA

Translation (1300 aa):
MNTDSGGCARKRAAMSVTLTSVKRVQSSPNLLAAGRDSQSPDSAWRSYNDGNQETLNGDATYSSLAAKGF
RSVRPNLQDKRSPTQSQITVNGNSGGAVSPMSYYQRPFSPSAYSLPASLNSSIVMQHGTSLDSTDTYPQH
AQSLDGTTSSSIPLYRSSEEEKRVTVIKAPHYPGIGPVDESGIPTAIRTTVDRPKDWYKTMFKQIHMVHK
PDDDTDMYNTPYTYNAGLYNPPYSAQSHPAAKTQTYRPLSKSHSDNSPNAFKDASSPVPPPHVPPPVPPL
RPRDRSSTEKHDWDPPDRKVDTRKFRSEPRSIFEYEPGKSSILQHERPPPLPTTPTPVPREPGRKPLSSS
RLGEVTGSPSPPPRSGAPTPSSRAPALSPTRTDRINPDDIDLENEPWYKFFSELEFGRPPPKKPLDYVQD
HSSGVFNEASLYQSSIDRSLERPMSSASMASDFRKRRKSEPAVGPPRGLGDQSASRTSPGRVDLPGSSTT
LTKSFTSSSPSSPSRAKGGDDSKICPSLCSYSGLNGNPSSELDYCSTYRQHLDVPRDSPRAISFKNGWQM
ARQNAEIWSSTEETVSPKIKSRSCDDLLNDDCDSFPDPKVKSESMGSLLCEEDSKESCPMAWGSPYVPEV
RSNGRSRIRHRSARNAPGFLKMYKKMHRINRKDLMNSEVICSVKSRILQYESEQQHKDLLRAWSQCSTEE
VPRDMVPTRISEFEKLIQKSKSMPNLGDDMLSPVTLEPPQNGLCPKRRFSIEYLLEEENQSGPPARGRRG
CQSNALVPIHIEVTSDEQPRAHVEFSDSDQDGVVSDHSDYIHLEGSSFCSESDFDHFSFTSSESFYGSSH
HHHHHHHHHHRHLISSCKGRCPASYTRFTTMLKHERARHENTEEPRRQEMDPGLSKLAFLVSPVPFRRKK
NSAPKKQTEKAKCKASVFEALDSALKDICDQIKAEKKRGSLPDNSILHRLISELLPDVPERNSSLRALRR
SPLHQPLHPLPPDGAIHCPPYQNDCGRMPRSASFQDVDTANSSCHHQDRGGALQDRESPRSYSSTLTDMG
RSAPRERRGTPEKEKLPAKAVYDFKAQTSKELSFKKGDTVYILRKIDQNWYEGEHHGRVGIFPISYVEKL
TPPEKAQPARPPPPAQPGEIGEAIAKYNFNADTNVELSLRKGDRVILLKRVDQNWYEGKIPGTNRQGIFP
VSYVEVVKKNTKGAEDYPDPPIPHSYSSDRIHSLSSNKPQRPVFTHENIQGGGEPFQALYNYTPRNEDEL
ELRESDVIDVMEKCDDGWFVGTSRRTKFFGTFPGNYVKRL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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