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Report for CCDS26141.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
26141.1 Public Mus musculus 12 Serpina1c 23 108 98 CCDS HistoryNCBI Gene:20702Re-query CCDS DB by CCDS ID:26141.1See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 26141.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000074051.5 ENSMUSP00000073695.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000074051.5Link to Ensembl Protein Viewer:ENSMUSP00000073695.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000074051Re-query CCDS DB by Protein ID:ENSMUSP00000073695
Original member Current member NCBI NM_009245.2 NP_033271.1 Accepted alive Link to Nucleotide Sequence:NM_009245.2Link to Protein Sequence:NP_033271.1Re-query CCDS DB by Nucleotide ID:NM_009245Re-query CCDS DB by Protein ID:NP_033271Link to BLAST:NP_033271.1

Chromosomal Locations for CCDS 26141.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 12 (NC_000078.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 103895012 103895203 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 103896005 103896155 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 103897041 103897311 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 103898758 103899385 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1242 nt):
ATGACTCCCTCCATCTCATGGGGTCTACTGCTTCTGGCAGGCCTGTGTTGCCTGGTCCCCAGCTTTCTGG
CTGAGGATGTTCAGGAGACAGACACCTCCCAGAAGGATCAGTCCCCAGCCTCCCATGAGATCGCTACAAA
CCTGGGAGACTTTGCAATCAGCCTATACCGGGAGCTGGTCCATCAGTCCAACACTTCCAACATCTTCTTC
TCCCCAGTGAGCATTGCCACAGCCTTTGCTATGCTCTCCCTAGGGAGCAAGGGTGACACTCACACGCAGA
TCCTAGAGGGCCTGCAGTTCAACCTCACACAAACATCGGAGGCTGACATCCACAAGTCCTTCCAACACCT
CCTCCAAACCCTCAACAGACCAGACAGTGAGCTGCAGCTGAGCACAGGCAATGGCCTCTTTGTCAACAAT
GACCTGAAGCTGGTGGAGAAGTTTCTGGAAGAGGCCAAGAACCATTATCAGGCAGAAGTCTTCTCTGTCA
ACTTTGCAGAGTCAGAGGAGGCCAAGAAAGTGATTAATGATTTTGTGGAGAAGGGAACCCAAGGAAAGAT
AGCTGAGGCGGTGAAAAAACTGGACCAAGACACAGTTTTCGCCCTGGCAAATTACATTCTCTTTAAAGGC
AAATGGAAGAAGCCATTCGATCCTGAGAACACTGAGGAAGCTGAGTTCCACGTGGACGAGTCCACCACGG
TGAAGGTGCCCATGATGACCCTCTCGGGAATGCTTGATGTGCACCATTGCAGCACGCTGTCCAGCTGGGT
GCTGCTGATGGATTATGCAGGCAATGCCACTGCTGTCTTCCTTCTGCCCGATGATGGGAAGATGCAGCAT
CTGGAGCAAACTCTCAGCAAGGAGCTCATCTCCAAGTTCCTGCTAAAGAGGCCCAGAAGGTTAGCCCAGA
TCCACTTCCCCAGACTGTCCATCTCTGGAGAATATAACTTGAAGACACTCATGAGTCCACTGGGCATCAC
CCGGATCTTCAACAATGGGGCTGACCTCTCCGGAATCACAGAGGAGAATGCTCCCCTGAAGCTCAGCCAG
GCTGTGCATAAGGCTGTGCTGACCATGGATGAGACAGGAACAGAAGCTGCAGCAGCTACAGTCTTACTAG
CCGTTCCTTATTCTATGCCCCCTATCGTGCGCTTCGATCACCCTTTCCTTTTCATAATATTTGAAGAACA
CACTCAGAGCCCCCTCTTTGTGGGAAAAGTGGTAGATCCCACACATAAATGA

Translation (413 aa):
MTPSISWGLLLLAGLCCLVPSFLAEDVQETDTSQKDQSPASHEIATNLGDFAISLYRELVHQSNTSNIFF
SPVSIATAFAMLSLGSKGDTHTQILEGLQFNLTQTSEADIHKSFQHLLQTLNRPDSELQLSTGNGLFVNN
DLKLVEKFLEEAKNHYQAEVFSVNFAESEEAKKVINDFVEKGTQGKIAEAVKKLDQDTVFALANYILFKG
KWKKPFDPENTEEAEFHVDESTTVKVPMMTLSGMLDVHHCSTLSSWVLLMDYAGNATAVFLLPDDGKMQH
LEQTLSKELISKFLLKRPRRLAQIHFPRLSISGEYNLKTLMSPLGITRIFNNGADLSGITEENAPLKLSQ
AVHKAVLTMDETGTEAAAATVLLAVPYSMPPIVRFDHPFLFIIFEEHTQSPLFVGKVVDPTHK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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