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Report for CCDS40695.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
40695.1 Public Mus musculus 9 Fam83b 23 108 98 CCDS HistoryNCBI Gene:208994Re-query CCDS DB by CCDS ID:40695.1See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 40695.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000098546.3 ENSMUSP00000096146.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000098546.3Link to Ensembl Protein Viewer:ENSMUSP00000096146.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000098546Re-query CCDS DB by Protein ID:ENSMUSP00000096146
Original member Current member EBI ENSMUST00000183437.7 ENSMUSP00000139354.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000183437.7Link to Ensembl Protein Viewer:ENSMUSP00000139354.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000183437Re-query CCDS DB by Protein ID:ENSMUSP00000139354
Original member Current member NCBI NM_001045518.2 NP_001038983.1 Accepted alive Link to Nucleotide Sequence:NM_001045518.2Link to Protein Sequence:NP_001038983.1Re-query CCDS DB by Nucleotide ID:NM_001045518Re-query CCDS DB by Protein ID:NP_001038983Link to BLAST:NP_001038983.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001038983.1 1012 Q0VBM2 1012 100% 0 0

Chromosomal Locations for CCDS 40695.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 9 (NC_000075.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 76490781 76493085 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 76502109 76502233 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 76503018 76503182 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 76545340 76545783 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3039 nt):
ATGGAGGCTTCATCAATGCTTTCATCACTAAATGATGAGTGCCGATCTGACAACTATGTCGAGCCGCACT
ACAAGGAGTGGTATCGCGTGGCAGTTGATACTCTAATTGAACATGGGTTAGAAGCCTACCAAGAGTTTCT
CATCAAGGAGCGAGTTTCAGACTTTCTGGCAGAGGAAGAGATTAATTATATTTTGAAAAATGTCCAGAAG
ATTGCACAAAATACAGAACATGGTTCTGATAGTTCCTGTGATGACGGCTCGTCTTCAGGGACTTACTGGC
CCATGCAGTCTGATGTGGAGGCTCCAAATCTTGATCTAGGCTGGCCATACGTGATGCCCGGACTCTTAGG
GAGTACCCACATAGACCTCCTCTTTCACCCACCAAGGGCACATCTGCTTACAATAAAGGAAACTATTCGG
AAGATGATCAAAGAAGCGAGAAAGGTGGTTGCTATAGTGATGGATGTGTTTACTGATGTGGATATTTTCA
AAGAAATAGTAGAGGCATCAACACGAGGAATATCTGTGTACATTCTACTTGATGAGTCCAATTTTAGTCA
TTTTCTAACAATGACTGAAAAACAGGGTTGTCAAATTCAACGTCTCAGGAACATTCGCATACGGACAGTA
AAAGGTCAAGATTATCTTTCAAAAACAGGAGCAAAATTCCACGGAAAAATGGAACAGAAATTTTTGCTAG
TTGACTGCCAGAAAGTGATGTATGGGTCTTACAGTTACATGTGGTCATTTGAGAAAGCTCATCTCAGCAT
GGTTCAGATAATCACAGGCCACCTCGTAGAGTTATTTGATGAAGAATTTCGAACACTCTATGCTAGGTCC
TCTGTCCCAAGTTCTTTTGCTCAGGAAGAATCGGTGAGGGCAAAGCCAGGCAAAGCCTTGTGGGAGAATG
GCATTTACCAGCGATCCATTTCTTCATTAGCTTCCGTTTCCAGCCAGAGAAACCTTTTTGGCAGACAAGA
CCAAATTCATAAACTAGATTCTAGTTACTTCAAAGGCAGAGGGATATATCCTCTAAATGATCAGGACAAA
CACAGCATGAGAAACCATGGCTACAAACCTCATTTTGTTCCAAACTTCAATGGTCCAAGTACAATCCGCC
ACTTCCAACCCAGTCAGCTCAATGAAAACTGGAAGAGGCATAGCTATGCTGGGGAACAACCGGAAACAAC
ACCGTACCTGCTGCTCAACAGAGCTATGAATCGGACCAATAATGCTCCTGGACGCTGGCGAAGGCCTTCA
GACAGTCTCAGTGTAGCATCCTCATTAAGGGGAGGACAAGGAAGCCAGCAAAACATACCAGCTCAGAGTT
TTGCTGATCGGCTTGCCCAGAGAAAAACCACAAATCTTGCAGAGAGGAATTCAAATGTACGCAGGTCATT
TAACGGGACAGATAATCATATCCGCTTTATACAACAACGGATGCCAACTCTGGAGAATACCACGAAGTCT
TTCCTGCGGAGCTGGAGAATTGAATCGTACTTAAATGACAATTCAGAAGTCCCACCTGATTCAAATGGTT
CCACCCTGGGTGACAGATTTGAAGGCTACGAAAACCCTGAGGCCGTGAAAGCCAATGCACTCTATACTCA
CTCGAGGCTCCGCTCCTCGTTTGTGTTTAAACCAACTTTACCGGAACAAAAAGAAGTCAACAGCTGTACA
ACTGGCTCTTCAAATTCCACCATCATCGGTTCTCAAGGAAGCGATACACCTAATGAGGTCCCAGATACCT
CCACAAATGCACCGCCCTTGACAGAAAAACCTTTGCCTGAACCAAGCTCCAAGCTCCCAACACAACAAGA
GGAACCAAAAATGCACAACTTGCAGGTTCCCGAAAAGCAACCAGAAGCCTTAAACCAAAGAACAAATGGC
CGAGCAGAATTAAACAACTGTATCTATACAAACCTGTGTGTCAATAAGCAGAGGGAGAACACAGAAAATC
AGCAAAATGACAATCTGCTCAAAAGGCGCAGTTTCCCGTCCTTTGACCACTCGAAGGTCAATTTAGAGCA
TGGGAATAGCAAGAATTATGTTTATAGTACCCTTACCAGAAATCGGATTCGACAACCAGAAAAACCCAAG
GAGGTTGTGCTGAAGAGCTCTAAAAGCATGCACAACGTGACCCACAGCGCAGAGGAAGATGATGACGAGG
TTATCGAGAGAGACCCTCCAAGTGCCTCTGCCACCAAATCTATTTCCATTGCTGCTTTGCTTGATGTGAA
TAAGGAAGAACCCAACAAAGAGCCTAATTCTAAAAAGGAAGGCAAAGCCTCCCCGAGTTTTTTGAAAAAG
GGGTCTCAGAAATTAAGGTCCTTACTTAGTCTCACCCCAGAAAAGAGAGAAAGCCTAGCTAAAAACAAGG
CGCCCGCATTTTATAGAATGTGTAGTAGCTCTGACACTTTGGTTTCTGAGGGTGAAGAGAATCAAAAGCC
CAAAAAATCCGAACCCAAAGTTGATTCATCTCCCAGAAGAAAGCGTTCCTCCTCGTCAAATTCTCAAGGC
AGCATCCACAAGAGCAAGGAGGACATAGCGGTTAGCGCCTCTCCAGGGATAAGTTCCCAAGCTGAGGAAA
GTAGAAGAATAGCGCCTTCTCCGAGGCCCGTTGAGAGGAGACTTTCCGAGAGAGCGGGAGATGCCTCCGC
CCCAAGATTTAATACCGAACAGATCCAATACCGGGATTCCAAGGAGATCAGCTCACTCATGACCCCTGCC
AGACGGCCAACACCTTCTCCGGTGCTAAAGCCCAATGAGCTTCTAAGATCTCATTCCACCAACCAGCGAG
TTTACAGTCGATTCGAGCCATTTTGTAAGATTGAGAGCTCTATTCAGCCAGCGAGCAGCGTTACAAATAC
ACATGTCAACCGCCCAGAAGTCAAATCCTCAACCATGGGCACCGCTTATGGCAGGTCCAGCCCAATGTTG
AATTATAAGACTGGTGCTTATCATTCATACGCCCCCAATGAAAACAAGTTCCGGGGATTTATGCAAAAGT
TCGGAAACTTCATACACAAAAACAAGTGA

Translation (1012 aa):
MEASSMLSSLNDECRSDNYVEPHYKEWYRVAVDTLIEHGLEAYQEFLIKERVSDFLAEEEINYILKNVQK
IAQNTEHGSDSSCDDGSSSGTYWPMQSDVEAPNLDLGWPYVMPGLLGSTHIDLLFHPPRAHLLTIKETIR
KMIKEARKVVAIVMDVFTDVDIFKEIVEASTRGISVYILLDESNFSHFLTMTEKQGCQIQRLRNIRIRTV
KGQDYLSKTGAKFHGKMEQKFLLVDCQKVMYGSYSYMWSFEKAHLSMVQIITGHLVELFDEEFRTLYARS
SVPSSFAQEESVRAKPGKALWENGIYQRSISSLASVSSQRNLFGRQDQIHKLDSSYFKGRGIYPLNDQDK
HSMRNHGYKPHFVPNFNGPSTIRHFQPSQLNENWKRHSYAGEQPETTPYLLLNRAMNRTNNAPGRWRRPS
DSLSVASSLRGGQGSQQNIPAQSFADRLAQRKTTNLAERNSNVRRSFNGTDNHIRFIQQRMPTLENTTKS
FLRSWRIESYLNDNSEVPPDSNGSTLGDRFEGYENPEAVKANALYTHSRLRSSFVFKPTLPEQKEVNSCT
TGSSNSTIIGSQGSDTPNEVPDTSTNAPPLTEKPLPEPSSKLPTQQEEPKMHNLQVPEKQPEALNQRTNG
RAELNNCIYTNLCVNKQRENTENQQNDNLLKRRSFPSFDHSKVNLEHGNSKNYVYSTLTRNRIRQPEKPK
EVVLKSSKSMHNVTHSAEEDDDEVIERDPPSASATKSISIAALLDVNKEEPNKEPNSKKEGKASPSFLKK
GSQKLRSLLSLTPEKRESLAKNKAPAFYRMCSSSDTLVSEGEENQKPKKSEPKVDSSPRRKRSSSSNSQG
SIHKSKEDIAVSASPGISSQAEESRRIAPSPRPVERRLSERAGDASAPRFNTEQIQYRDSKEISSLMTPA
RRPTPSPVLKPNELLRSHSTNQRVYSRFEPFCKIESSIQPASSVTNTHVNRPEVKSSTMGTAYGRSSPML
NYKTGAYHSYAPNENKFRGFMQKFGNFIHKNK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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