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Report for CCDS7547.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7547.1 Public Homo sapiens 10 TAF5 24 110 108 CCDS HistoryNCBI Gene:6877Re-query CCDS DB by CCDS ID:7547.1Re-query CCDS DB by GeneID:6877See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7547.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000369839.4 ENSP00000358854.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000369839.4Link to Ensembl Protein Viewer:ENSP00000358854.3Re-query CCDS DB by Nucleotide ID:ENST00000369839Re-query CCDS DB by Protein ID:ENSP00000358854
Original member Current member NCBI NM_006951.5 NP_008882.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_006951.5Link to Protein Sequence:NP_008882.2Re-query CCDS DB by Nucleotide ID:NM_006951Re-query CCDS DB by Protein ID:NP_008882Link to BLAST:NP_008882.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_008882.2 800 Q15542-1 800 100% 0 0

Chromosomal Locations for CCDS 7547.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 103367990 103368548 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 103373358 103373595 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 103378235 103378550 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 103379608 103379771 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 103379884 103380019 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 103381721 103381841 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 103383238 103383367 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 103385326 103385490 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 103387175 103387352 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 103387521 103387698 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 103388006 103388223 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2403 nt):
ATGGCGGCGCTGGCGGAGGAGCAGACGGAGGTGGCGGTCAAGCTAGAGCCTGAGGGACCGCCAACGCTGC
TACCTCCGCAGGCGGGGGACGGCGCAGGCGAGGGTAGCGGCGGCACTACCAACAACGGCCCCAACGGCGG
CGGCGGGAACGTTGCGGCGTCGTCGTCCACTGGCGGGGATGGCGGGACCCCCAAGCCCACGGTGGCTGTC
TCCGCCGCTGCCCCGGCGGGGGCGGCCCCGGTGCCCGCCGCTGCTCCGGACGCCGGCGCTCCGCATGACC
GACAGACTCTACTGGCCGTGCTGCAGTTCCTACGGCAGAGCAAACTCCGCGAGGCCGAAGAGGCGCTGCG
CCGTGAGGCCGGGCTGCTGGAGGAGGCAGTGGCGGGCTCCGGAGCCCCGGGAGAGGTGGACAGCGCCGGC
GCTGAGGTGACCAGCGCGCTTCTCAGCCGGGTGACCGCCTCGGCCCCTGGCCCTGCGGCCCCCGACCCTC
CGGGCACTGGCGCTTCGGGGGCCACGGTCGTCTCAGGTTCAGCCTCAGGTCCTGCGGCTCCGGGTAAAGT
TGGAAGTGTTGCTGTGGAAGACCAGCCAGATGTCAGTGCCGTGTTGTCAGCCTACAACCAACAAGGAGAT
CCCACAATGTATGAAGAATACTATAGTGGACTGAAACACTTCATTGAATGTTCCCTGGACTGCCATCGGG
CAGAGTTGTCCCAACTTTTTTATCCTCTGTTTGTGCACATGTACTTGGAGCTAGTCTACAATCAACATGA
GAATGAAGCAAAGTCATTCTTTGAGAAGTTCCATGGAGATCAGGAATGTTATTACCAGGATGACCTACGA
GTATTATCTAGTCTTACCAAAAAGGAACACATGAAAGGGAATGAGACCATGTTGGATTTTCGAACAAGTA
AATTTGTTCTGCGTATTTCCCGTGACTCGTACCAACTCTTGAAGAGGCATCTTCAGGAGAAACAGAACAA
TCAGATATGGAACATAGTTCAGGAGCACCTCTACATTGACATCTTTGATGGGATGCCGCGTAGTAAGCAA
CAGATAGATGCGATGGTGGGAAGTTTGGCAGGAGAGGCTAAACGAGAGGCAAACAAATCAAAGGTATTTT
TTGGTTTATTAAAAGAACCAGAAATTGAGGTACCTTTGGATGACGAGGATGAAGAGGGAGAAAATGAAGA
AGGAAAACCTAAAAAGAAGAAGCCTAAAAAAGATAGTATTGGATCCAAAAGCAAAAAACAAGATCCCAAT
GCTCCACCTCAGAACAGAATCCCTCTTCCTGAGTTGAAAGATTCAGATAAGTTGGATAAGATAATGAATA
TGAAAGAAACCACCAAACGAGTGCGCCTTGGGCCGGACTGCTTACCCTCCATTTGTTTCTATACATTTCT
CAATGCTTACCAGGGTCTCACTGCAGTGGATGTCACTGATGATTCTAGTCTGATTGCTGGAGGTTTTGCA
GATTCAACTGTCAGAGTGTGGTCGGTAACACCCAAAAAGCTTCGTAGTGTCAAACAAGCATCAGATCTTA
GTCTTATAGACAAAGAATCAGATGATGTCTTAGAAAGAATCATGGATGAGAAAACAGCAAGTGAGTTGAA
GATTTTGTATGGTCACAGTGGGCCTGTCTACGGAGCCAGCTTCAGTCCGGATAGGAACTATCTGCTTTCC
TCTTCAGAGGACGGAACTGTTAGATTGTGGAGCCTTCAAACATTTACTTGTTTGGTGGGATATAAAGGAC
ACAACTATCCAGTATGGGACACACAATTTTCTCCATATGGATATTATTTTGTGTCAGGGGGCCATGACCG
AGTAGCTCGGCTCTGGGCTACAGACCACTATCAGCCTTTAAGAATATTTGCCGGCCATCTTGCTGATGTG
AATTGTACCAGATTCCATCCAAATTCTAATTATGTTGCTACGGGCTCTGCAGACAGAACTGTGCGGCTCT
GGGACGTCCTGAATGGTAACTGTGTAAGGATCTTCACTGGACACAAGGGACCAATTCATTCCTTGACATT
TTCTCCCAATGGGAGATTCCTGGCTACAGGAGCAACAGATGGCAGAGTGCTTCTTTGGGATATTGGACAT
GGTTTGATGGTTGGAGAATTAAAAGGCCACACTGATACAGTCTGTTCACTTAGGTTTAGTAGAGATGGTG
AAATTTTGGCATCAGGTTCAATGGATAATACAGTTCGATTATGGGATGCTATCAAAGCCTTTGAAGATTT
AGAGACCGATGACTTTACTACAGCCACTGGGCATATAAATTTACCTGAGAATTCACAGGAGTTATTGTTG
GGAACATATATGACCAAATCAACACCAGTTGTACACCTTCATTTTACTCGAAGAAACCTGGTTCTAGCTG
CAGGAGCTTATAGTCCACAATAA

Translation (800 aa):
MAALAEEQTEVAVKLEPEGPPTLLPPQAGDGAGEGSGGTTNNGPNGGGGNVAASSSTGGDGGTPKPTVAV
SAAAPAGAAPVPAAAPDAGAPHDRQTLLAVLQFLRQSKLREAEEALRREAGLLEEAVAGSGAPGEVDSAG
AEVTSALLSRVTASAPGPAAPDPPGTGASGATVVSGSASGPAAPGKVGSVAVEDQPDVSAVLSAYNQQGD
PTMYEEYYSGLKHFIECSLDCHRAELSQLFYPLFVHMYLELVYNQHENEAKSFFEKFHGDQECYYQDDLR
VLSSLTKKEHMKGNETMLDFRTSKFVLRISRDSYQLLKRHLQEKQNNQIWNIVQEHLYIDIFDGMPRSKQ
QIDAMVGSLAGEAKREANKSKVFFGLLKEPEIEVPLDDEDEEGENEEGKPKKKKPKKDSIGSKSKKQDPN
APPQNRIPLPELKDSDKLDKIMNMKETTKRVRLGPDCLPSICFYTFLNAYQGLTAVDVTDDSSLIAGGFA
DSTVRVWSVTPKKLRSVKQASDLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLS
SSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADV
NCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGH
GLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAIKAFEDLETDDFTTATGHINLPENSQELLL
GTYMTKSTPVVHLHFTRRNLVLAAGAYSPQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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