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Report for CCDS70464.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
70464.1 |
Public |
Mus musculus |
13 |
Ddx46 |
23 |
108 |
98 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:212880](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:70464.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 13 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 16, NCBI annotation release 104, Ensembl annotation release 75
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 70464.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENSMUST00000172272.7 |
ENSMUSP00000133245.1 |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENSMUST00000172272.7](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSMUSP00000133245.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENSMUST00000172272](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSMUSP00000133245](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENSMUST00000223736.1 |
ENSMUSP00000153328.1 |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENSMUST00000223736.1](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSMUSP00000153328.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENSMUST00000223736](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSMUSP00000153328](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001282055.1 |
NP_001268984.1 |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001282055.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001268984.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001282055](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001268984](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001268984.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_001268984.1 |
1032 |
Q569Z5-1 |
1032 |
100% |
0 |
0 |
Chromosomal Locations for CCDS 70464.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (3099 nt): ATGGGCCGGGAGTCTCGCCACTACCGAAAACGCTCAGCATCTCGAGGTCGTTCTGGAAGTCGATCGAGGA GTCGCTCACCCTCTGACAAAAGAAGCAAACGTGGGGATGACAGACGCTCTCGGAGCAGAGACAGAGACCG GAGGAGAGAGAGGTCTCGGAGTAGGGACAAGAGAAGATCTCGGTCAAGGGACAGGAAGCGCCTGAGGCGC TCCAGAAGTAGAGAGCGAGACAGAAGCCGAGAGCGGAGAAGATCTCGGAGCAGAGATAGAAGGCGCTCAA GGAGTCGAAGCCGGGGCAGGCGGTCCCGGTCCTCCAGTCCTGGCAGCAAAACCAAGAAGACTGAGAACAG GTCTAGGTCCAAAGAGAAAGCAGAAGGTGGGGACAGCTCCAAGGAGAAGAAAAAGGACAAGGATGACAAG GAGGACGAGAAAGAGAAGGATGCTGGGAACTTTGACCAGAATAAACTGGAAGAAGAAATGAGAAAACGGA AAGAAAGAGTTGAAAAATGGCGCGAAGAGCAGCGTAAGAAGGCTATGGAGAACATAGGAGAGCTGAAGAA GGAGATTGAGGAGATGAAGCAGGGGAAGAAGTGGAGCTTGGAGGACGACGACGATGATGAAGATGATCCT GCCGAGGCTGAGAAGGAAGGGACTGAAATGGAGGACGAGGAGCTGGACCCATTAGACGCCTACATGGAAG AAGTGAAGGAAGAGGTAAAAAAGTTTAACATGAGGAGCGTGAAAGGCGGCGCAGGAAATGAGAAGAAGTC TGGGCCAACAGTCACAAAAGTTGTCACTGTGGTGACCACCAAGAAAGCAGTAGTAGACGCGGATAAGAAG AAGGGGGAACTCATGGAGAATGACCAGGACGCCATGGAGTATTCCTCAGAGGAGGAGGAAGTTGACCTTC AAACGGCCCTCACAGGCTACCAGACAAAACAGAGAAAACTTCTAGAGCCAGTTGATCATGGAAAAATTGA ATATGAGCCATTCAGAAAAAACTTTTATGTTGAAGTTCCAGAATTAGCAAAAATGTCTCAAGAAGAGGTG AATGTGTTTCGATTGGAAATGGAGGGCATTACAGTTAAAGGAAAAGGTTGCCCGAAACCAATTAAATCAT GGGTCCAGTGTGGAATTTCCATGAAGATACTAAATTCCCTCAAAAAGCATGGCTATGAAAAGCCAACACC AATCCAAACTCAAGCGATTCCTGCTATAATGTCTGGACGAGATTTGATTGGCATTGCCAAGACAGGAAGT GGAAAAACCATTGCTTTTCTTTTGCCCATGTTTAGACACATCATGGATCAGAGGTCATTAGAAGAAGGAG AGGGACCAATAGCTGTCATCATGACTCCAACTCGAGAGCTGGCTTTACAAATCACTAAAGAATGTAAGAA GTTTTCGAAGACCTTGGGACTGAGAGTGGTCTGTGTGTATGGAGGGACAGGAATCAGCGAGCAGATTGCT GAGCTGAAAAGAGGTGCTGAAATTATTGTTTGCACACCTGGTCGAATGATTGACATGTTAGCGGCTAACA GTGGTCGGGTCACAAATCTTCGAAGAGTGACATATGTTGTTTTAGATGAAGCAGACAGAATGTTTGACAT GGGTTTTGAACCACAGGTCATGCGCATTGTGGATAACGTTCGTCCTGACCGACAGACAGTTATGTTTTCA GCCACTTTCCCTAGAGCTATGGAGGCTTTGGCCCGCAGGATCCTGAGCAAACCTATTGAAGTGCAGGTTG GAGGCAGGAGTGTGGTTTGCTCCGATGTGGAACAGCAGGTGATTGTGATTGAAGAAGAAAAGAAATTCTT GAAATTGCTGGAGCTTTTAGGCCATTATCAGGAGTCAGGATCTGTCATTATATTTGTGGATAAGCAGGAA CACGCAGATGGTCTTCTGAAGGACTTGATGAGAGCATCGTACCCTTGCATGTCTCTTCACGGAGGTATTG ATCAATATGACAGGGACAGTATCATAAATGACTTTAAGAATGGAACCTGCAAGCTCCTCGTTGCCACATC TGTTGCAGCTCGTGGTCTCGATGTGAAACATCTAATTCTTGTAGTGAATTACAGCTGCCCCAATCATTAT GAAGATTATGTGCACAGAGCTGGGCGGACTGGAAGAGCGGGCAACAAGGGTTATGCCTACACCTTCATCA CAGAGGATCAAGCTCGATATGCTGGTGACATCATTAAAGCTCTTGAATTGTCAGGGACCGCAGTGCCTCC TGACCTAGAAAAACTCTGGAGTGACTTCAAAGATCAACAGAAAGCTGAAGGAAAAATAATTAAAAAGAGT AGTGGCTTCTCTGGCAAGGGATTCAAGTTTGATGAAACAGAACAGGCTTTAGCCAATGAGAGGAAAAAGC TGCAGAAAGCTGCTCTTGGCCTGCAAGATTCTGATGACGAGGATGCTGCAGTTGATATTGATGAACAGAT TGAAAGCATGTTTAATTCAAAGAAGAGAGTAAAGGACATGGCTGCACCCGGCACATCCAGCGTGCCCGCG CCCACTGCAGGCAATGCTGAGAAGCTAGAAATCGCCAAGAGATTGGCTCTCAGAATCAACGCTCAGAAGA ACCTGGGCATCGAGTCTCAGGTAGATGTGATGCAGCAGGCCACCAACGCCATCCTCAGAGGTGGCACTAT CCTGGCTCCCACTGTGTCTGCGAAAACCATTGCAGAGCAGCTTGCTGAGAAGATCAATGCCAAGCTCAAC TACGTGCCTTTGGAGAAGCAGGAGGAAGAGAGACAGGAGGGTGGGCAGAGCGAGTCTTTCAAGAGATACG AGGAAGAATTAGAAATTAATGACTTCCCACAGACTGCGAGGTGGAAAGTCACCTCAAAGGAAGCCCTGCA GAGGATCAGCGAGTACTCTGAGGCCGCCATCACCATCAGGGGCACCTACTTCCCTCCCGGCAAGGAGCCC AAGGAAGGAGAGCGCAAGATCTACCTGGCCATCGAAAGTGCCAACGAGCTGGCTGTGCAGAAAGCAAAGG CAGAGATCACCAGGCTCATAAAAGAGGAACTGATCCGACTGCAAAATTCATACCAACCAACCAACAAAGG ACGATACAAAGTATTATAA
Translation (1032 aa): MGRESRHYRKRSASRGRSGSRSRSRSPSDKRSKRGDDRRSRSRDRDRRRERSRSRDKRRSRSRDRKRLRR SRSRERDRSRERRRSRSRDRRRSRSRSRGRRSRSSSPGSKTKKTENRSRSKEKAEGGDSSKEKKKDKDDK EDEKEKDAGNFDQNKLEEEMRKRKERVEKWREEQRKKAMENIGELKKEIEEMKQGKKWSLEDDDDDEDDP AEAEKEGTEMEDEELDPLDAYMEEVKEEVKKFNMRSVKGGAGNEKKSGPTVTKVVTVVTTKKAVVDADKK KGELMENDQDAMEYSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEV NVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGS GKTIAFLLPMFRHIMDQRSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIA ELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVDNVRPDRQTVMFS ATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFLKLLELLGHYQESGSVIIFVDKQE HADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHY EDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELSGTAVPPDLEKLWSDFKDQQKAEGKIIKKS SGFSGKGFKFDETEQALANERKKLQKAALGLQDSDDEDAAVDIDEQIESMFNSKKRVKDMAAPGTSSVPA PTAGNAEKLEIAKRLALRINAQKNLGIESQVDVMQQATNAILRGGTILAPTVSAKTIAEQLAEKINAKLN YVPLEKQEEERQEGGQSESFKRYEEELEINDFPQTARWKVTSKEALQRISEYSEAAITIRGTYFPPGKEP KEGERKIYLAIESANELAVQKAKAEITRLIKEELIRLQNSYQPTNKGRYKVL
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