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Report for CCDS36689.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
36689.1 Public Mus musculus 13 Tut7 23 108 98 CCDS HistoryNCBI Gene:214290Re-query CCDS DB by CCDS ID:36689.1See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 36689.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000071703.5 ENSMUSP00000071623.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000071703.5Link to Ensembl Protein Viewer:ENSMUSP00000071623.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000071703Re-query CCDS DB by Protein ID:ENSMUSP00000071623
Original member Current member NCBI NM_153538.3 NP_705766.3 Accepted alive Link to Nucleotide Sequence:NM_153538.3Link to Protein Sequence:NP_705766.3Re-query CCDS DB by Nucleotide ID:NM_153538Re-query CCDS DB by Protein ID:NP_705766Link to BLAST:NP_705766.3

Chromosomal Locations for CCDS 36689.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 13 (NC_000079.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 59778799 59778815 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 59782018 59782343 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 59784765 59784880 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 59785721 59785812 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 59785895 59785942 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 59788460 59788637 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 59789184 59789261 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 59789412 59789525 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 59789848 59789937 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 59791776 59791879 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 59794447 59794504 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 59796820 59796920 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 59797670 59797756 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 59798998 59799148 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 59799641 59800716 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 59802016 59802196 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 59805223 59805375 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 59808046 59808165 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 59809378 59809504 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 59810571 59810640 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 59811515 59811566 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 59814866 59814954 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 59815546 59815723 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 59816271 59816387 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 59816658 59816839 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 59821560 59822079 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4425 nt):
ATGGGAGATACAGCAAAACCTTACTTTGTGAAGCGCACTAAAGACCGTGGAATTATTGATGATGATGATT
TCAGAAGGGGCCATCCCCAACAAGATTATTTAATAATGGATGATTATGCTAAAGGCCATAGCAGTAAAAT
GGAAAAGGGCCTTCCAAAAAAGAAGATATCACCCGGGAACTATGGGAACACCCCCAGGAAAGGACTGTAT
GGGGTTTCCAGCAATCCATATGCATTTAAAAACCCAATTTACAGTCAGCCTGCTTGGATGAATGATAACC
ACAAAGATCAAAATAAAAAATGGCTATCTGATGAACTCGCTGGTAATGCAGACAGCTGGAGAGAGTTCAA
GCCCGGACCTAGGATTCCTGTCATAAGCCGCTCAAGGAAGGAATCCTTTCAGGAAAGTGACGATGCCTAC
AGGTGGCAGGAGGGGAGAGGCTGCAGAGCTGTGAGAAGGCTGTTTCAGAAAGACCTCAGCAGCCTAGAAG
CCATGTCAGAAATGGAAGCAGGAAGTCCTGAAAACAAGAAACAGCGGTCCAGACCTCGTAAGCCACGGAG
GACTAGAACGGAGGACAGTGAGCAGGATGGAGATCTGGACGGTCCTGTCATCGACGAGTCTGTCCTTTCA
ACCAAGGAGCTGTTGGGCCTCCAGCAGGCTGAGGAACGGCTCAAGAGAGACTGCATCGACAGGCTGAAAA
GGCGACCACGAAACTGCCCGACAGCAAAGTATACCTGCAAACTGTGCGATGCTTTGATTGACTCCATTCC
GTTTGCTCATAAGCACATCAAGGAGAAGAGGCACAAGAAGAACCTTAAGGAAAAGCAGGAGGAAGAATTG
CTCACCACACTGCCCCCGCCAGCGCCCTCCCAGATACATGCAGTTGGCAGCGCCATTGACAGAGTGGTGC
AGGAGTTTGGTTTACACAGTGAAAACTTGGATCAGAGACTAGAAATTAAGCGTGTCATGGAAAGTGTGTT
CCGGCACAAGCTACCAGACTGTTCTCTTAGGCTTTATGGATCCTCCTGTAGCCGACTGGGCTTCAGAGAC
TCTGACGTGAACATTGATGTTCAGTTTCCAGCTGTCATGTCTCAGCCAGATGTCCTCTTACTTGTTCAAG
AATGTTTAAAGAACAGTGACTCCTTTATTGATGTTGATGCTGATTTCCATGCCCGGGTCCCTGTGGTGGT
GTGCAGAGATAAGCAAAGCGGCCTTCTTTGTAAAGTAAGTGCAGGAAACGAAAACGCTTGGCTGACCACA
AAGCACCTAACAGCTCTTGGAAAACTAGAGCCAAGGCTGGTTCCTCTGGTGATTGCATTCAGATACTGGG
CAAAGCTTTGTAGTATTGATCGCCCCGAAGAAGGAGGCCTGCCACCATATGTGTTTGCTCTGATGGCTGT
TTTCTTCCTTCAGCAAAGAAAAGAACCTCTCTTGCCAGTTTATCTAGGATCATGGATTGAAGAATTCTCA
TTAAATAAATTAGGGAATTTCAGCCTTAAAGATGTTGAGAAAGACTCTGTGGTCTGGGAATACACTGACA
ACAGCACAGGGGACACCAGCTCAGCAAAAGAGGAGGCACCCAAAGAGACTGCAGCAAAGAAGGGACAGGT
GCCATTGACATTTAATATAAAGCATCAGCCTTCAGTGCCAGTCGGGCAACTCTGGGTGGAATTGCTGCGG
TTCTATGCTTTAGAGTTTAATCTGGCTGATTTAGTGATCAGTATTCGTGTCAAAGAATTAATATCACGGG
AATCAAAGGACTGGCCCAAAAAGCGTATCGCAATTGAAGACCCCTATTCTGTTAAAAGAAATGTGGCAAG
GACCCTGAATAACCAGCCTGTGTTTGAGTATATACTCCATTGTTTGAGGACAACATATAAATATTTCGCT
CTTCCACACAAAGTTACAAAACCCAACCTCACAAAGCCTCCTAGCCCAGTCACCTGTGTTTCAGACCCTT
ACAGAGAAGCAAAAAATGGTGGCCCAGAACCCCAAGCAACAAATATTGATAAACTGGGAAATGCAGCTGT
GGCTCAAGATCCTGGTGTTCAAACCTCAGGTGACTGCAGAGCACAGCTAGTTACTCTTAAGAATACCACT
GAGGAGGTGGGAAGCCCAGCAAAGGAGAAGACAGGAGGTGTGCACATCCCAGCCCACCAGGAGAGCTCTG
GCTGTGTCCAGGCAGAGGTCAGTTGTGAGGGTTTGGAGGATGCCACAGCAGAGCTTCCGGAAACAGGAAG
TGACAACGAGGAAGTCAGAAGGAAGACCAAGCATCCTTTGAGCACTGATGACCAAGGTTTAAGCAGCAGC
AAGCACCCAGAACTGCAGAACTGTGGCAGCCTGTGTGGTCTGCAGGCAGACAACACTCTGGAGTTAGTAG
CTGAAGAGTGTAATAGCTGTGCCTCTTTGGACAACAAGGCTGAGGTCAATGAAGAGAGGATAGAAGGCGC
TGAGGAACTAGAAGAAGCAGCAGCTCTGAGTTGCTTTTCCCCTTCAGTACAGAGTCGCACATCTGCAGCC
ATGCACTTTGATGATGAGGAGGAGGAGGAGGAAGAAGAGGAGGAAGAGGAGCCCAGGCTCAGCATTAACC
TTACAGAAGATGAGGAGGGGGTTGCTAATGAGCATCAGGTGGACAGCAGGTATGCTGGGTCAGGTGAGGA
GGATGCCCTCTCTGAAGAAGATGACTTGGCAGAGCCTGCTAAGGGTGAAGATACAGGAGAATGTGGAGAA
AACGTGGGTGGGACTCTGCTCATAGACCTAAATAGAATAACACTTAAAGAAGAAAGCTTTCCTGAGGAAG
ATTTACCTGGGGACCAGTCTGAGTTCTTCTACGAATTTAGAAAACTGACCTTCACCAAAGGCAAGTCCCC
CACAGTAGTGTGCAGCTTGTGTAAGCGAGAAGGTCACCTAAAGAAGGACTGTCCTGAGGACTTCAAGAGG
GTCCAGCTGGAGCCGTTGCCACCCCTGACACCCAAGTTCTCAAACATCTTAGATCAAGTCTGCGTCCAGT
GTTACAAGGATTTTTCTCCAACTATTGTAGAAGATCAGGCTCGTGAACATATCCGGCAAAATCTAGAAAG
TTTCATAAAACAGGATTTTCCAGGAACTAAATTGAGCTTGTTTGGCTCCTCCAAAAATGGATTTGGGTTC
AAACAGAGTGACCTTGACGTCTGTATGACGATTAACGGACATGAGACTGCTGAGGGGCTGGACTGTGTAA
GAACTATTGAGGAGCTGGCTCGAGTCCTCAGAAAGCACTCAGGGTTGAGGAATATCCTTCCTATCACAAC
AGCCAAGGTGCCCATCGTGAAGTTCTTCCATCTAAGAAGTGGTCTGGAAGTGGACATCAGCTTGTATAAC
ACACTGGCGCTTCATAACACAAGGCTCTTGTCTGCATACTCAGCCATTGACCCCAGAGTGAAGTATCTGT
GCTACACCATGAAAGTGTTCACAAAGATGTGTGACATCGGTGACGCGTCCAGAGGCAGCTTGTCATCCTA
CGCTTACACTCTTATGGTGCTATACTTCCTCCAGCAAAGGTCTCCACCTGTCATCCCCGTGCTTCAAGAG
ATATACAAAGGTGAAAAGAAACCAGAAATACTTGTTGATGGCTGGAATATTTACTTTTTCGATCAAATAA
ATGAACTGCCCACTTGTTGGCCAGAATATGGGAAAAATACAGAACCTGTCGGGCAGCTGTGGCTGGGACT
TCTGCGCTTCTACACTGAGGAGTTTGACTTTAAGGAGCACGTGATCAGCATCAGAAGAAAGAGTCTGCTT
ACAACTTTTAAGAAACAGTGGACCTCAAAATACATTGTTATTGAAGATCCCTTCGATTTGAATCACAATC
TTGGTGCTGGATTATCGAGGAAAATGACAAATTTTATAATGAAAGCTTTTATCAATGGTAGAAGAGTATT
TGGAATTCCAGTCAAAGGATTTCCAAAGGACAACCCCTCAAAACTGGCATACTTTTTTGATCCGGATGTC
CTAACTGAGGGAGAACTGGCCCCAAATGACAGGTGCTGCCGAATTTGTGGGAAAATCGGGCACTTCATGA
AGGACTGTCCCATGAGGAGGAAAGTGAGGCGACGGAGAGACCAGGAAGATACCCCAAACCAAAGGTACTC
TGAGAGCAAAGAAAAAAGAAGCAAAGAGGACAAAGAGATTCAGAACAAGTACACAGAAAAGGAAGTGTCA
ACAAAAGAAGATAAGCTCACACCGTGTGCAGCTGCGAAAGCCAAGCCAGTGAGGGCAGCTGTCGACCTGG
GCCGGGAGAAGCTCCTCAGGACGCCCACAGAAAAGTGGAAGAGACAGGACGACAGAGACTCGAGAGAAAA
GCGTTGTTTCATCTGTGGAAGAGAAGGACACATTAAAAAGGAATGCCCACAGTTCAAAGGCTCTCCAGGC
AGTGCTTTTACATGA

Translation (1474 aa):
MGDTAKPYFVKRTKDRGIIDDDDFRRGHPQQDYLIMDDYAKGHSSKMEKGLPKKKISPGNYGNTPRKGLY
GVSSNPYAFKNPIYSQPAWMNDNHKDQNKKWLSDELAGNADSWREFKPGPRIPVISRSRKESFQESDDAY
RWQEGRGCRAVRRLFQKDLSSLEAMSEMEAGSPENKKQRSRPRKPRRTRTEDSEQDGDLDGPVIDESVLS
TKELLGLQQAEERLKRDCIDRLKRRPRNCPTAKYTCKLCDALIDSIPFAHKHIKEKRHKKNLKEKQEEEL
LTTLPPPAPSQIHAVGSAIDRVVQEFGLHSENLDQRLEIKRVMESVFRHKLPDCSLRLYGSSCSRLGFRD
SDVNIDVQFPAVMSQPDVLLLVQECLKNSDSFIDVDADFHARVPVVVCRDKQSGLLCKVSAGNENAWLTT
KHLTALGKLEPRLVPLVIAFRYWAKLCSIDRPEEGGLPPYVFALMAVFFLQQRKEPLLPVYLGSWIEEFS
LNKLGNFSLKDVEKDSVVWEYTDNSTGDTSSAKEEAPKETAAKKGQVPLTFNIKHQPSVPVGQLWVELLR
FYALEFNLADLVISIRVKELISRESKDWPKKRIAIEDPYSVKRNVARTLNNQPVFEYILHCLRTTYKYFA
LPHKVTKPNLTKPPSPVTCVSDPYREAKNGGPEPQATNIDKLGNAAVAQDPGVQTSGDCRAQLVTLKNTT
EEVGSPAKEKTGGVHIPAHQESSGCVQAEVSCEGLEDATAELPETGSDNEEVRRKTKHPLSTDDQGLSSS
KHPELQNCGSLCGLQADNTLELVAEECNSCASLDNKAEVNEERIEGAEELEEAAALSCFSPSVQSRTSAA
MHFDDEEEEEEEEEEEEPRLSINLTEDEEGVANEHQVDSRYAGSGEEDALSEEDDLAEPAKGEDTGECGE
NVGGTLLIDLNRITLKEESFPEEDLPGDQSEFFYEFRKLTFTKGKSPTVVCSLCKREGHLKKDCPEDFKR
VQLEPLPPLTPKFSNILDQVCVQCYKDFSPTIVEDQAREHIRQNLESFIKQDFPGTKLSLFGSSKNGFGF
KQSDLDVCMTINGHETAEGLDCVRTIEELARVLRKHSGLRNILPITTAKVPIVKFFHLRSGLEVDISLYN
TLALHNTRLLSAYSAIDPRVKYLCYTMKVFTKMCDIGDASRGSLSSYAYTLMVLYFLQQRSPPVIPVLQE
IYKGEKKPEILVDGWNIYFFDQINELPTCWPEYGKNTEPVGQLWLGLLRFYTEEFDFKEHVISIRRKSLL
TTFKKQWTSKYIVIEDPFDLNHNLGAGLSRKMTNFIMKAFINGRRVFGIPVKGFPKDNPSKLAYFFDPDV
LTEGELAPNDRCCRICGKIGHFMKDCPMRRKVRRRRDQEDTPNQRYSESKEKRSKEDKEIQNKYTEKEVS
TKEDKLTPCAAAKAKPVRAAVDLGREKLLRTPTEKWKRQDDRDSREKRCFICGREGHIKKECPQFKGSPG
SAFT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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