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Report for CCDS57057.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
57057.1 Public Mus musculus 17 Uqcc4 23 108 98 CCDS HistoryNCBI Gene:214489Re-query CCDS DB by CCDS ID:57057.1See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 10, NCBI annotation release 38.1, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 57057.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000088307.4 ENSMUSP00000137122.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000088307.4Link to Ensembl Protein Viewer:ENSMUSP00000137122.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000088307Re-query CCDS DB by Protein ID:ENSMUSP00000137122
Original member Current member NCBI NM_183150.2 NP_898973.2 Accepted alive Link to Nucleotide Sequence:NM_183150.2Link to Protein Sequence:NP_898973.2Re-query CCDS DB by Nucleotide ID:NM_183150Re-query CCDS DB by Protein ID:NP_898973Link to BLAST:NP_898973.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_898973.2 136 Q6RUT7 136 100% 0 0

Chromosomal Locations for CCDS 57057.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 17 (NC_000083.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 25184609 25184640 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 25184720 25185098 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (411 nt):
ATGAACAGTGTCCTGTGCTCACGGGCTGCGGGAGCGGTCCGGGCTCTGCGGCTCGTGGGCTGGGCTTCGC
GAAGTTTGCATCCGCCGCCCCGTGGCCGGTCTCCAGCTCAGCCTGCAGACAGGGAAGAGGAGGACGACGA
CCCCAACCTCCCGATCCAATTTTCCGGCAGCAAAGCCACCCCGATCCGCTGGACCGTGGAGCATTCCCTG
GGGAAGCCGCAGCAGCGGCCCTGGTGGAAAGTGCTGCCGCTCACCCTCACACTCGTGGCTCTGGTTGTAT
GGTGCTACCAGAGGGAGGAGAGCGGCATGGACCTGTGGTTGAGGCAGGTGTTGGAAGAGGAGGACGAGGA
GGAGCCGGAAGGTCCTCCGGAGGAGCTTGAAGCTCCGGCCCTCTACGGGGCTAGAACGTAA

Translation (136 aa):
MNSVLCSRAAGAVRALRLVGWASRSLHPPPRGRSPAQPADREEEDDDPNLPIQFSGSKATPIRWTVEHSL
GKPQQRPWWKVLPLTLTLVALVVWCYQREESGMDLWLRQVLEEEDEEEPEGPPEELEAPALYGART


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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