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Report for CCDS14660.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14660.1 Public Homo sapiens X ARHGEF6 24 110 108 CCDS HistoryNCBI Gene:9459Re-query CCDS DB by CCDS ID:14660.1Re-query CCDS DB by GeneID:9459See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14660.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000250617.7 ENSP00000250617.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000250617.7Link to Ensembl Protein Viewer:ENSP00000250617.6Re-query CCDS DB by Nucleotide ID:ENST00000250617Re-query CCDS DB by Protein ID:ENSP00000250617
Original member Current member NCBI NM_004840.3 NP_004831.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_004840.3Link to Protein Sequence:NP_004831.1Re-query CCDS DB by Nucleotide ID:NM_004840Re-query CCDS DB by Protein ID:NP_004831Link to BLAST:NP_004831.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_004831.1 776 Q15052-1 776 100% 0 0

Chromosomal Locations for CCDS 14660.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 136668029 136668169 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 136669482 136669536 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 136672020 136672119 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 136675007 136675096 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 136676624 136676717 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 136677936 136677956 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 136679535 136679660 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 136680731 136680876 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 136681890 136681968 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 136682758 136682844 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 136685677 136685823 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 136687932 136687991 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 136690610 136690748 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 136706908 136707030 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 136708675 136708770 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 136713276 136713370 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 136732102 136732172 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 136743585 136743786 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 136745223 136745347 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 136747508 136747592 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 136779414 136779497 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 136780718 136780882 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2331 nt):
ATGAATCCAGAAGAACAAATCGTGACATGGCTTATATCTTTGGGAGTTTTAGAGTCCCCTAAAAAGACCA
TCTGTGATCCGGAGGAGTTTTTAAAGTCCTCGCTGAAAAATGGGGTAGTTCTGTGCAAACTGATCAACAG
ACTCATGCCTGGCTCTGTGGAAAAGTTTTGTCTGGATCCCCAAACTGAAGCTGACTGCATCAACAACATC
AATGACTTCCTGAAAGGATGTGCAACCCTCCAAGTGGAAATATTTGATCCTGATGACCTTTATTCAGGGG
TCAATTTCTCCAAGGTACTGAGTACTCTTTTAGCTGTCAACAAAGCAACAGAAGATCAGCTATCAGAAAG
ACCATGTGGACGTTCCTCTTCTCTTAGTGCTGCTAATACTTCTCAGACAAACCCACAGGGAGCAGTTTCT
AGCACAGTTTCAGGGCTGCAAAGGCAGTCAAAGACAGTGGAGATGACGGAAAATGGAAGTCATCAGTTGA
TAGTAAAAGCAAGATTCAACTTTAAGCAGACTAATGAGGATGAACTGTCAGTTTGTAAGGGGGACATCAT
TTACGTCACACGAGTTGAAGAAGGAGGCTGGTGGGAAGGCACATTAAATGGGAGAACAGGCTGGTTCCCC
AGTAATTATGTCCGTGAAATTAAATCCAGTGAGAGACCTCTCTCCCCAAAAGCCGTCAAAGGATTTGAAA
CTGCTCCACTTACCAAGAATTATTATACTGTGGTGTTACAGAACATCCTGGACACTGAAAAAGAATATGC
TAAAGAACTTCAGTCTCTTCTTGTTACTTACTTAAGACCCCTGCAGTCCAATAACAATCTGAGTACTGTG
GAGGTTACATCTTTACTGGGAAACTTCGAGGAAGTATGCACATTTCAACAGACACTCTGCCAAGCCTTGG
AAGAATGTTCAAAGTTTCCAGAAAACCAGCACAAAGTAGGAGGTTGTCTACTGAGTCTCATGCCTCATTT
TAAATCTATGTATCTGGCTTACTGTGCAAACCATCCTTCAGCTGTAAATGTGCTCACTCAGCACAGTGAT
GAGTTGGAACAATTCATGGAAAATCAAGGTGCATCGAGCCCAGGTATCCTCATTTTAACAACAAACCTCA
GCAAACCATTCATGCGACTGGAGAAATATGTTACTCTCTTGCAAGAGTTAGAACGGCATATGGAGGATAC
TCATCCAGATCATCAGGATATTCTGAAAGCAATCGTAGCATTCAAAACTCTCATGGGGCAATGTCAAGAT
CTGAGGAAGAGAAAACAGCTGGAGTTACAGATACTGTCCGAACCTATTCAGGCATGGGAAGGAGAAGATA
TTAAAAACTTGGGAAATGTGATTTTTATGTCACAAGTAATGGTGCAGTATGGAGCATGTGAGGAAAAAGA
GGAGCGGTACCTTATGTTATTTTCAAATGTCCTGATAATGTTATCTGCAAGTCCTCGGATGAGTGGCTTT
ATCTATCAGGGAAAAATACCAATAGCAGGAACGGTGGTGACTAGATTAGATGAAATTGAAGGGAATGACT
GCACATTTGAAATCACTGGTAACACAGTGGAGAGAATTGTGGTCCATTGTAACAACAACCAGGACTTCCA
GGAATGGTTGGAGCAGCTGAACAGACTGATCAGAGGACCTGCCTCTTGCAGTTCATTATCCAAAACCTCA
TCGTCATCATGTAGTGCTCATTCTTCTTTTAGCTCTACCGGACAGCCCCGAGGACCCTTGGAGCCTCCTC
AAATTATAAAACCGTGGAGTTTAAGTTGTCTACGACCTGCACCTCCACTTAGACCATCAGCAGCACTAGG
TTATAAAGAGAGGATGTCTTATATCTTAAAGGAGTCTAGTAAAAGCCCTAAAACGATGAAGAAATTTCTT
CATAAAAGGAAGACTGAGAGAAAACCATCGGAGGAGGAATATGTGATTAGGAAAAGTACAGCTGCTCTGG
AAGAGGATGCTCAAATCCTTAAAGTGATCGAAGCCTACTGCACCAGCGCAAATTTTCAACAAGGCCATGG
CTCAAGTACTCGAAAAGATTCCATTCCACAAGTCCTACTCCCTGAGGAAGAGAAACTCATCATTGAAGAA
ACCAGAAGCAACGGCCAGACCATCATGGAAGAAAAGAGCCTTGTTGATACTGTTTACGCCTTGAAGGACG
AGGTCAGAGAACTGAAGCAGGAAAATAAAAGAATGAAGCAATGCCTGGAAGAAGAACTGAAATCAAGAAG
GGACCTAGAAAAGCTGGTGCGGAGGCTTTTGAAGCAAACAGATGAGTGTATTCGAGGCGAGTCCAGTAGC
AAGACCTCAATTCTTCCATAA

Translation (776 aa):
MNPEEQIVTWLISLGVLESPKKTICDPEEFLKSSLKNGVVLCKLINRLMPGSVEKFCLDPQTEADCINNI
NDFLKGCATLQVEIFDPDDLYSGVNFSKVLSTLLAVNKATEDQLSERPCGRSSSLSAANTSQTNPQGAVS
STVSGLQRQSKTVEMTENGSHQLIVKARFNFKQTNEDELSVCKGDIIYVTRVEEGGWWEGTLNGRTGWFP
SNYVREIKSSERPLSPKAVKGFETAPLTKNYYTVVLQNILDTEKEYAKELQSLLVTYLRPLQSNNNLSTV
EVTSLLGNFEEVCTFQQTLCQALEECSKFPENQHKVGGCLLSLMPHFKSMYLAYCANHPSAVNVLTQHSD
ELEQFMENQGASSPGILILTTNLSKPFMRLEKYVTLLQELERHMEDTHPDHQDILKAIVAFKTLMGQCQD
LRKRKQLELQILSEPIQAWEGEDIKNLGNVIFMSQVMVQYGACEEKEERYLMLFSNVLIMLSASPRMSGF
IYQGKIPIAGTVVTRLDEIEGNDCTFEITGNTVERIVVHCNNNQDFQEWLEQLNRLIRGPASCSSLSKTS
SSSCSAHSSFSSTGQPRGPLEPPQIIKPWSLSCLRPAPPLRPSAALGYKERMSYILKESSKSPKTMKKFL
HKRKTERKPSEEEYVIRKSTAALEEDAQILKVIEAYCTSANFQQGHGSSTRKDSIPQVLLPEEEKLIIEE
TRSNGQTIMEEKSLVDTVYALKDEVRELKQENKRMKQCLEEELKSRRDLEKLVRRLLKQTDECIRGESSS
KTSILP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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