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Report for CCDS23777.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
23777.1 Public Mus musculus 10 Tspyl1 23 108 98 CCDS HistoryNCBI Gene:22110Re-query CCDS DB by CCDS ID:23777.1See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 23777.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000061372.6 ENSMUSP00000063051.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000061372.6Link to Ensembl Protein Viewer:ENSMUSP00000063051.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000061372Re-query CCDS DB by Protein ID:ENSMUSP00000063051
Original member Current member NCBI NM_009433.3 NP_033459.1 Accepted alive Link to Nucleotide Sequence:NM_009433.3Link to Protein Sequence:NP_033459.1Re-query CCDS DB by Nucleotide ID:NM_009433Re-query CCDS DB by Protein ID:NP_033459Link to BLAST:NP_033459.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_033459.1 379 O88852 379 100% 0 0

Chromosomal Locations for CCDS 23777.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 34282281 34283420 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1140 nt):
ATGAGCAGCCCGGAGCGGGACGAGGGGACCCCTGTCCCCGACAGCCGCGGCCACTGCGATGCTGACACTG
TCTCGGGGACCCCAGACCGGCGACCGCTGCTCGGCGAGGAGAAGGCGGTGACAGGTGAGGGCCGCGCAGG
GATCGTGGGGAGCCCCGCGCCCCGAGATGTCGAGGGCCTTGTCCCCCAGATTCGGGTGGCCGCAGCTAGG
CAGGGAGAGTCACCTCCTTCCGTTCGGGGCCCCGCGGCAGCGGTGTTCGTGACACCGAAATATGTGGAGA
AGGCCCAAGAAACTCGGGGAGCGGAGTCCCAGGCCCGTGACGTGAAGACGGAACCGGGCACCGTCGCGGC
TGCAGCGGAAAAGTCAGAAGTGGCCACGCCAGGGAGCGAGGAGGTGATGGAGGTGGAGCAGAAGCCCGCG
GGCGAAGAAATGGAGATGCTGGAGGCGAGTGGAGGAGTGAGGGAGGCGCCGGAGGAGGCAGGGCCCTGGC
ACCTGGGCATAGATCTTCGCAGGAACCCGCTGGAGGCCATCCAGCTGGAACTGGACACTGTGAATGCTCA
GGCCGACAGGGCCTTCCAACATCTGGAGCAGAAGTTTGGGCGAATGCGACGACACTACCTGGAACGGAGG
AACTACATCATTCAGAATATCCCAGGCTTCTGGATGACTGCCTTCCGGAACCACCCTCAGTTGTCCGCCA
TGATTAGGGGTCGGGATGCAGAGATGTTAAGGTACGTAACCAGTCTGGAGGTGAAGGAACTGAGACACCC
TAAGACTGGCTGCAAATTCAAGTTCTTTTTTCGAAGAAACCCCTACTTCAGAAACAAGCTGATTGTCAAG
GAATATGAAGTGAGATCATCTGGTCGAGTGGTGTCTCTTTCCACTCCAATCATTTGGCGGAGAGGGCATG
AGCCCCAGTCCTTCATTCGCAGAAACCAAGATCTCATTTGCAGCTTCTTCACCTGGTTCTCGGACCACAG
CCTTCCAGAATCTGACAGAATCGCTGAGATTATCAAAGAGGATCTGTGGCCAAACCCACTGCAATACTAC
CTGTGTCGTGAAGGAATCCGTAGACCCCGACGTCGCCCAATAAGGGAGCCAGTGGAGATTCCCAGGCCTT
TTGGCTTCCAGTCAGGTTAA

Translation (379 aa):
MSSPERDEGTPVPDSRGHCDADTVSGTPDRRPLLGEEKAVTGEGRAGIVGSPAPRDVEGLVPQIRVAAAR
QGESPPSVRGPAAAVFVTPKYVEKAQETRGAESQARDVKTEPGTVAAAAEKSEVATPGSEEVMEVEQKPA
GEEMEMLEASGGVREAPEEAGPWHLGIDLRRNPLEAIQLELDTVNAQADRAFQHLEQKFGRMRRHYLERR
NYIIQNIPGFWMTAFRNHPQLSAMIRGRDAEMLRYVTSLEVKELRHPKTGCKFKFFFRRNPYFRNKLIVK
EYEVRSSGRVVSLSTPIIWRRGHEPQSFIRRNQDLICSFFTWFSDHSLPESDRIAEIIKEDLWPNPLQYY
LCREGIRRPRRRPIREPVEIPRPFGFQSG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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