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Report for CCDS27734.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
27734.1 Public Mus musculus 15 Pim3 23 108 98 CCDS HistoryNCBI Gene:223775Re-query CCDS DB by CCDS ID:27734.1See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 27734.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000042818.10 ENSMUSP00000044603.9 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000042818.10Link to Ensembl Protein Viewer:ENSMUSP00000044603.9Re-query CCDS DB by Nucleotide ID:ENSMUST00000042818Re-query CCDS DB by Protein ID:ENSMUSP00000044603
Original member Current member NCBI NM_145478.2 NP_663453.1 Accepted alive Link to Nucleotide Sequence:NM_145478.2Link to Protein Sequence:NP_663453.1Re-query CCDS DB by Nucleotide ID:NM_145478Re-query CCDS DB by Protein ID:NP_663453Link to BLAST:NP_663453.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_663453.1 326 P58750 326 100% 0 0

Chromosomal Locations for CCDS 27734.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 88862668 88862752 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 88862838 88862947 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 88863041 88863091 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 88863179 88863548 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 88864316 88864492 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 88864575 88864762 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (981 nt):
ATGCTGCTGTCCAAGTTCGGCTCCCTGGCGCACCTCTGCGGGCCTGGCGGCGTGGACCACCTCCCAGTGA
AGATCCTACAGCCAGCCAAGGCTGACAAGGAGAGCTTCGAGAAGGTGTACCAGGTGGGCGCCGTGCTGGG
CAGCGGCGGCTTCGGCACGGTCTACGCGGGCAGCCGCATCGCCGACGGACTCCCGGTGGCTGTGAAGCAC
GTGGTGAAGGAGCGGGTGACCGAGTGGGGCAGTCTCGGCGGAGTGGCCGTGCCCCTGGAGGTGGTGCTGC
TGCGCAAGGTGGGCGCGGCGGGCGGCGCGCGCGGCGTCATCCGCTTGCTGGACTGGTTCGAGCGGCCCGA
CGGCTTCTTGTTGGTGCTGGAGCGACCCGAGCCGGCACAGGACCTCTTCGACTTCATCACTGAACGAGGC
GCCCTGGACGAGCCGCTGGCGCGTCGCTTCTTCGCGCAGGTGCTTGCCGCTGTGCGGCACTGCCACAATT
GTGGGGTCGTGCACCGCGACATCAAGGACGAGAACCTGCTGGTGGACCTGCGCTCGGGAGAGCTGAAGCT
CATCGACTTCGGCTCGGGCGCGGTGCTCAAGGACACGGTCTACACTGACTTTGATGGCACCCGTGTGTAC
AGCCCCCCAGAGTGGATCCGATATCACCGATATCACGGGCGGTCTGCCACTGTGTGGTCTCTGGGTGTAC
TGCTCTACGACATGGTGTGTGGGGACATTCCCTTTGAGCAGGATGAGGAGATCTTGCGCGGCAGGCTCTT
TTTCCGGAGGAGGGTCTCCCCAGAGTGCCAGCAGCTTATTGAGTGGTGTCTCTCCCTGAGGCCCTCAGAG
AGGCCCTCCCTGGACCAAATTGCTGCCCACCCCTGGATGCTGGGGACAGAGGGGAGCGTTCCAGAGAACT
GTGACCTTCGGCTTTGTGCCCTGGATACTGACGACGGAGCCAGTACCACTTCCAGCAGTGAGAGCTTGTG
A

Translation (326 aa):
MLLSKFGSLAHLCGPGGVDHLPVKILQPAKADKESFEKVYQVGAVLGSGGFGTVYAGSRIADGLPVAVKH
VVKERVTEWGSLGGVAVPLEVVLLRKVGAAGGARGVIRLLDWFERPDGFLLVLERPEPAQDLFDFITERG
ALDEPLARRFFAQVLAAVRHCHNCGVVHRDIKDENLLVDLRSGELKLIDFGSGAVLKDTVYTDFDGTRVY
SPPEWIRYHRYHGRSATVWSLGVLLYDMVCGDIPFEQDEEILRGRLFFRRRVSPECQQLIEWCLSLRPSE
RPSLDQIAAHPWMLGTEGSVPENCDLRLCALDTDDGASTTSSSESL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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