NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS28814.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
28814.1 Public Mus musculus 17 Tmem63b 23 108 98 CCDS HistoryNCBI Gene:224807Re-query CCDS DB by CCDS ID:28814.1See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 28814.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000113523.8 ENSMUSP00000109151.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000113523.8Link to Ensembl Protein Viewer:ENSMUSP00000109151.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000113523Re-query CCDS DB by Protein ID:ENSMUSP00000109151
Original member NCBI NM_198167.3 NP_937810.2 Updated not alive Link to Nucleotide Sequence:NM_198167.3Link to Protein Sequence:NP_937810.2Re-query CCDS DB by Nucleotide ID:NM_198167Re-query CCDS DB by Protein ID:NP_937810
Current member NCBI NM_198167.4 NP_937810.2 Accepted alive Link to Nucleotide Sequence:NM_198167.4Link to Protein Sequence:NP_937810.2Re-query CCDS DB by Nucleotide ID:NM_198167Re-query CCDS DB by Protein ID:NP_937810Link to BLAST:NP_937810.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_937810.2 832 Q3TWI9 832 100% 0 0

Chromosomal Locations for CCDS 28814.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 17 (NC_000083.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 45660789 45660980 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 45661223 45661303 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 45661454 45661569 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 45661757 45661924 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 45662863 45662968 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 45663507 45663669 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 45664744 45664809 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 45664919 45665005 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 45665165 45665271 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 45666027 45666180 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 45666317 45666454 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 45666578 45666711 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 45667695 45667818 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 45669943 45670023 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 45673160 45673230 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 45673733 45673841 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 45673979 45674030 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 45674119 45674261 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 45675386 45675423 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 45677926 45678016 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 45678963 45679001 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 45679237 45679316 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 45679532 45679690 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2499 nt):
ATGCTGCCGTTCTTGCTGGCCACACTGGGCACCGCGGCCCTCAACAGCAGCAACCCGAAGGACTACTGCT
ACAGTGCCCGGATCCGCAGCACTGTCCTGCAGGGCCTGCCCTTCGGGGGCGTCCCCACCGTGCTGGCTCT
GGACTTCATGTGCTTTCTTGCCCTGCTGTTCTTATTCTCTATTCTCCGGAAGGTGGCCTGGGACTACGGG
CGGCTGGCCTTGGTGACAGATGCAGACAGGCTTCGCCGGCAGGAGAGGGAGCGAGTGGAACAGGAATATG
TGGCATCAGCTATGCATGGGGACAGTCACGACCGGTATGAGCGTCTCACCTCCGTCTCCAGCTCTGTCGA
CTTTGACCAAAGGGACAATGGCTTCTGTTCCTGGCTGACAGCCATCTTCAGGATAAAGGACGATGAGATC
CGGGACAAGTGTGGGGGCGACGCTGTGCACTACCTGTCCTTCCAAAGACACATCATTGGGTTGCTGGTTG
TCGTGGGCGTCCTCTCTGTAGGCATTGTGCTGCCTGTCAACTTCTCAGGGGACCTGCTAGAGAACAATGC
CTACAGCTTTGGGAGAACCACCATTGCCAACTTGAAATCAGGGAATAACCTGCTCTGGCTACATACCTCC
TTCGCCTTCCTCTACCTGCTGCTCACCGTCTACAGCATGAGGAGACACACCTCTAAGATGCGCTACAAGG
AAGATGATCTGGTCAAGCGGACTCTTTTCATCAATGGAATCTCCAAATATGCAGAGTCGGAAAAAATCAA
GAAACATTTCGAGGAGGCCTACCCCAACTGCACAGTTCTGGAAGCCCGGCCCTGTTACAACGTGGCTCGA
CTTATGTTCCTTGATGCTGAGAGGAAGAAGGCTGAGCGGGGAAAACTCTACTTTACGAACCTGCAAAGCA
AGGAAAATGTACCCGCCATGATCAACCCCAAACCGTGTGGTCACCTCTGCTGCTGTGTGGTTCGAGGCTG
CGAGCAGGTGGAGGCCATTGAGTACTACACAAAGCTGGAGCAGAGGCTGAAGGAAGACTACAGGCGGGAG
AAGGAGAAAGTGAACGAGAAACCTCTGGGCATGGCCTTTGTCACCTTCCACAATGAGACCATCACAGCCA
TCATCCTAAAGGACTTCAACGTGTGCAAATGCCAGGGCTGTACCTGCCGCGGGGAGCCGAGAGCCTCCTC
CTGCAGCGAAGCACTGCATATCTCCAACTGGACCGTGACCTACGCCCCTGACCCTCAGAACATCTATTGG
GAACACCTCTCCATCCGAGGCTTCATCTGGTGGCTGCGCTGCCTGGTCATCAATGTGGTCCTCTTCATTC
TGCTCTTCTTCCTCACCACCCCGGCCATCATCATCACCACCATGGACAAGTTCAACGTCACCAAGCCTGT
GGAGTACCTCAACAACCCGATCATCACCCAGTTCTTCCCTACGCTACTGCTGTGGTGCTTCTCGGCCCTG
CTCCCCACCATTGTCTACTACTCCGCCTTCTTCGAAGCACACTGGACGCGCTCCGGGGAGAACAGGACGA
CCATGCACAAGTGCTACACCTTTCTCATCTTCATGGTGCTGCTTCTGCCCTCGCTGGGGCTGAGCAGCCT
AGACCTCTTCTTCCGCTGGCTCTTTGACAAGAAATTCCTGGCTGAAGCAGCTATTCGGTTTGAGTGTGTG
TTCCTGCCCGACAACGGCGCTTTCTTCGTGAACTACGTCATTGCCTCAGCCTTTATCGGTAACGCCATGG
ACCTGCTGCGCATCCCAGGCCTACTCATGTACATGATCCGGCTCTGCCTGGCGCGCTCCGCCGCTGAAAG
ACGCAACGTGAAGCGGCATCAGGCCTACGAGTTCCAGTTTGGCGCAGCCTACGCTTGGATGATGTGCGTC
TTCACGGTGGTCATGACCTACAGTATCACCTGCCCCATCATCGTGCCCTTCGGGCTCATGTACATGCTGC
TGAAGCACCTGGTAGACAGGTACAATCTCTACTACGCCTACTTGCCGGCCAAACTGGACAAGAAGATCCA
CTCGGGGGCTGTGAACCAGGTGGTGGCTGCGCCCATCCTCTGCCTCTTCTGGTTGCTCTTCTTCTCCACC
ATGCGCACGGGTTTCCTAGCCCCCACGTCTATGTTCACCTTCGTTGTTCTGGTAATCACCATCGTCATCT
GTCTCTGCCACGTCTGCTTTGGACACTTCAAATACCTCAGTGCCCACAACTACAAGATTGAACACACAGA
GACAGATGCCGTGAGCTCCAGAAGTAATGGACGGCCCCCCACTGCTGGCGCTGTCCCCAAATCTGCGAAA
TACATCGCTCAGGTGCTGCAGGACTCAGAGGGGGACGGGGACGGAGATGGGGCTCCTGGGAGCTCAGGCG
ATGAGCCCCCATCGTCCTCCTCCCAAGACGAGGAGTTGCTGATGCCTCCTGATGGCCTCACGGACACAGA
CTTCCAGTCATGCGAGGACAGCCTCATAGAGAATGAGATTCACCAGTAA

Translation (832 aa):
MLPFLLATLGTAALNSSNPKDYCYSARIRSTVLQGLPFGGVPTVLALDFMCFLALLFLFSILRKVAWDYG
RLALVTDADRLRRQERERVEQEYVASAMHGDSHDRYERLTSVSSSVDFDQRDNGFCSWLTAIFRIKDDEI
RDKCGGDAVHYLSFQRHIIGLLVVVGVLSVGIVLPVNFSGDLLENNAYSFGRTTIANLKSGNNLLWLHTS
FAFLYLLLTVYSMRRHTSKMRYKEDDLVKRTLFINGISKYAESEKIKKHFEEAYPNCTVLEARPCYNVAR
LMFLDAERKKAERGKLYFTNLQSKENVPAMINPKPCGHLCCCVVRGCEQVEAIEYYTKLEQRLKEDYRRE
KEKVNEKPLGMAFVTFHNETITAIILKDFNVCKCQGCTCRGEPRASSCSEALHISNWTVTYAPDPQNIYW
EHLSIRGFIWWLRCLVINVVLFILLFFLTTPAIIITTMDKFNVTKPVEYLNNPIITQFFPTLLLWCFSAL
LPTIVYYSAFFEAHWTRSGENRTTMHKCYTFLIFMVLLLPSLGLSSLDLFFRWLFDKKFLAEAAIRFECV
FLPDNGAFFVNYVIASAFIGNAMDLLRIPGLLMYMIRLCLARSAAERRNVKRHQAYEFQFGAAYAWMMCV
FTVVMTYSITCPIIVPFGLMYMLLKHLVDRYNLYYAYLPAKLDKKIHSGAVNQVVAAPILCLFWLLFFST
MRTGFLAPTSMFTFVVLVITIVICLCHVCFGHFKYLSAHNYKIEHTETDAVSSRSNGRPPTAGAVPKSAK
YIAQVLQDSEGDGDGDGAPGSSGDEPPSSSSQDEELLMPPDGLTDTDFQSCEDSLIENEIHQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH