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Report for CCDS21030.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
21030.1 |
Public |
Mus musculus |
7 |
Zfp60 |
23 |
108 |
98 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:22718](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:21030.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 7 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 21030.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENSMUST00000042641.13 |
ENSMUSP00000036627.7 |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENSMUST00000042641.13](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSMUSP00000036627.7](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENSMUST00000042641](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSMUSP00000036627](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENSMUST00000108336.7 |
ENSMUSP00000103973.1 |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENSMUST00000108336.7](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSMUSP00000103973.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENSMUST00000108336](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSMUSP00000103973](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENSMUST00000167955.1 |
ENSMUSP00000132607.1 |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENSMUST00000167955.1](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSMUSP00000132607.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENSMUST00000167955](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSMUSP00000132607](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_009560.2 |
NP_033586.2 |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_009560.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_033586.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_009560](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_033586](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_033586.2](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_029531.2 |
NP_083807.2 |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_029531.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_083807.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_029531](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_083807](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_083807.2](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 21030.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (2115 nt): ATGGCCAACTCTAGTTCTCAACACATGGTCTGTGGGTCAGTGACATTTAGGGATGTGGCTGTTGACTTCT CTCAGGAGGAGTGGGCCTGCCTGGATGCTACTCAGAAGGTCTTATACAGGAACATAATGTTGGAGACCTA CAGCAACCTGGTCGCAGTGGTGGGACGTTGCATTCCCAAGCCAGATCTGATCGTCTTACTAGAGCAGGAG AAAGAGCCCTGGATGGCTGTGAAGAAAGAAACAGGCAGGCCGAGCCAAGGTTTGGAGACAGGTTTTGAAG CTGAAAATAGATCTCCAAAGAATCATGTTTATAATAAAAAGTTACCCAAACAAACCATACAGCAATTAAG TAAAACTTCGGACGTCCAGGGCGTCAGTGTTAGTAATGGCCCTGGCTATAGTGTAATCAAGGAGCCACAG AATTATCAAGAAGGAGATGCTAATCGAAATATTACTAACAAGAAAGAAATGTCTACTTACACTAGCAAGA CTCTTGCTCACAATAAAGAAAAACCGTATAAATGTAAAGACTGTGGGAAGTGCTTTGGTTGTAAGTCAAA CCTTCATCAGCATGAGAGTATTCACACTGGAGAGAAGCCCTATGAATGTAAGGACTGTGGGAAGACCTTC AGACTCCCTCAGATGCTTTCAAGACATCAGAAGTCTCACAGTGATGAGAGACCTTTTGAGTGTAATATAT GTGGAAAGTCTTTTCATCTTCCTACCCTGCTTCAGTACCATAAAAATATTCATACAGGTTTAAAACCATT TGAATGTGAGGAGTGTGGGAAGTCCTTCAACCGCATCTCTACCCTTTTTCAGCATAGGACTATTCATGCT GGTATGAAACCGTATAAATGTAATGTGTGTGGGAAAGCCTTTAATCGTCGCTCAAACCTCCTGCAACATC AGAAAATTCATTCTGAGGACAGACCTTTTCATTGTAAGGTGTGTGGAAAGGCCTTCACTGTGCTGGCTCA GCTTACTCGGCACGAGAACATTCACACTGAAGACAAATCGTTTGAATGTAAGCAGTGTGGTAAGATATTT AGTAATGGCTCTTACCTCTTACGACACTACGATACTCACACCAATGAGAAACCCTTTGAGTGTAATATAT GTGGCAAGGCTTTTAGGCTTCATCTATACCTTTCTGAGCATCAGAAAACTCACACCGATGAGAAGCCTTT CAAGTGTAAGCTGTGTGAGTCAGCCTTCAGACGTAAGTACCAGCTCAGTGAACATCAGAGAATTCACACT GATGTGAAACCCTATCAGTGCAAGGATTGTGGGAAATTCTTTCGTCGACGATCAAATTTTACTGAACATC AGAGTATTCACACTGGAAAGAAACCCTTTGAGTGTAAGGACTGTGGGAAGGTCTTTAGACTAAATATACA TCTCATTCGACATCAGAGATTTCATAGTGATGAGAAGCCCTTTGAATGTAAAGAATGTGGAAAGGCTTTT CATTTTTCCAGCCAGCTTAATAACCATAAAACCAGTCATACAGGTCAGACACCTTTTGAATGTAAAGAAT GTGGGAAGTCGTTTAAGCGTGTCTCCAGCCTTGTGGAACATAGGATTATTCACAGTGGTGTGAAACCATA TAAATGTAATGCGTGTGGAAGAGCCTTCAATCGTCGCTCAAACCTCATGCAACATGAGAAAATTCATTCT GATGAGAGACCCTTTGAGTGTAAGGACTGTGGAAAGGCCTTCACTGTTCTGGCTCAGCTCACACGGCACC AGACGATTCATAATGGAAAGAAATCATATGAATGTGAGCAGTGTGGGTCAGCCTTCAGACTCCCGTACCA ACTCACTCAACATCAGAGAATTCATTATGATGTGAAGCCATTTCAGTGCAAGGAATGTGGAAAGGGCTTT GTTCGTAGTACAGGCCTTAGAATTCATGAAAGGATCCACACTGGTGAGAAGCCCTTTCAGTGTAAGGAGT GTGGAGAAGCCTTTCAGTATCATTACCAATTTCTTGGACACTTTAGAATTCATACTGGCAAGAACCCTTA TGAATGTAGTGAATGTGGGAAGTACTTTACTTATGGTCGAGACCTTAAAGTACATCAGAGTATTCACAAT CTTGAGAAACCGTAA
Translation (704 aa): MANSSSQHMVCGSVTFRDVAVDFSQEEWACLDATQKVLYRNIMLETYSNLVAVVGRCIPKPDLIVLLEQE KEPWMAVKKETGRPSQGLETGFEAENRSPKNHVYNKKLPKQTIQQLSKTSDVQGVSVSNGPGYSVIKEPQ NYQEGDANRNITNKKEMSTYTSKTLAHNKEKPYKCKDCGKCFGCKSNLHQHESIHTGEKPYECKDCGKTF RLPQMLSRHQKSHSDERPFECNICGKSFHLPTLLQYHKNIHTGLKPFECEECGKSFNRISTLFQHRTIHA GMKPYKCNVCGKAFNRRSNLLQHQKIHSEDRPFHCKVCGKAFTVLAQLTRHENIHTEDKSFECKQCGKIF SNGSYLLRHYDTHTNEKPFECNICGKAFRLHLYLSEHQKTHTDEKPFKCKLCESAFRRKYQLSEHQRIHT DVKPYQCKDCGKFFRRRSNFTEHQSIHTGKKPFECKDCGKVFRLNIHLIRHQRFHSDEKPFECKECGKAF HFSSQLNNHKTSHTGQTPFECKECGKSFKRVSSLVEHRIIHSGVKPYKCNACGRAFNRRSNLMQHEKIHS DERPFECKDCGKAFTVLAQLTRHQTIHNGKKSYECEQCGSAFRLPYQLTQHQRIHYDVKPFQCKECGKGF VRSTGLRIHERIHTGEKPFQCKECGEAFQYHYQFLGHFRIHTGKNPYECSECGKYFTYGRDLKVHQSIHN LEKP
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