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Report for CCDS21176.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21176.1 Public Mus musculus 7 Zfp819 23 108 98 CCDS HistoryNCBI Gene:74400Re-query CCDS DB by CCDS ID:21176.1Re-query CCDS DB by GeneID:74400See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21176.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000032661.13 ENSMUSP00000032661.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000032661.13Link to Ensembl Protein Viewer:ENSMUSP00000032661.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000032661Re-query CCDS DB by Protein ID:ENSMUSP00000032661
Original member Current member EBI ENSMUST00000116324.2 ENSMUSP00000112026.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000116324.2Link to Ensembl Protein Viewer:ENSMUSP00000112026.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000116324Re-query CCDS DB by Protein ID:ENSMUSP00000112026
Original member Current member NCBI NM_028913.3 NP_083189.2 Accepted alive Link to Nucleotide Sequence:NM_028913.3Link to Protein Sequence:NP_083189.2Re-query CCDS DB by Nucleotide ID:NM_028913Re-query CCDS DB by Protein ID:NP_083189Link to BLAST:NP_083189.2

Chromosomal Locations for CCDS 21176.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 43609907 43609978 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 43611983 43612109 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 43612547 43612639 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 43616387 43617918 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1824 nt):
ATGGCTGCTGACATGAATTTCTGTCAGAAGCTCCAGAGACTGGGAACAGAGGAGCAGGACGGGCCGTGTG
AGAGATTGGTGTCCTTTGAGGATGTAACTGTGAACTTCAGCCAGGAGGAGTGGCAGCACCTGGACTCCGC
CCAGAGACGCCTGTACCAGGACGTGTTGCTGGAGATCTACAGCCACCTCTTGGTAGTGGGGTATTCCAGG
CCAGAGGTCATCCTCAAGATGAAGAAAGTTAAGGACTCGCCGATGGGGAAGGTTGATTTCCCACATCAGA
GGTGTGGTCAAGGGGAGGCAGAGCATGACTCACACCAAATGTGTGTGAAGGCTGCATTTCCAAATGATGT
ATCAAGAGTAATCACTACAGGTGGCTCATATTGTTCCATTATCGAGGAACCGTGGCAGGGTGGTGACCCT
AAAACTTCAGATCCGCAAAACCACATCCCACCCTCGAGTTCTGGTGCTTTCTTCAGCCAGAAAACACTAA
TCACAGATGGACGTGAAGCAGCTGGGGGATCCATTCCTTTAGGCGCCCACGTCATTTCTACACAAAAGAG
ATCTCTGAGATGTTGCCCGTGTGAAAAGACGTTGCAGCCTCACCTTCAAGCAGACAGAGACCATCAAAGC
AGTGCCACAGAGCAGCCTGACGGCATTGTTGACTCTTGTCAGTCCTTCACACAAGGCCTTCCCACTGCTG
TGTGTCCAATTCACAGCACAGGAGAGGAAGCACGCAGAGGGGACCAATGTGCAAGTGTTCCCAGCCCTCA
GCAACCATTTATGCAGCATGGAACTCTTTCTCAGGACAAGCCAGTTGAATATACCAAATACGAGAAGGTC
TTCACTGCCGGGTCAGCTTTGTGTCAGCAGCAAACAACTAACCCTCTAGAGACACATTTTATTTGCCACA
TATGTGGGAAATCCTTCCTTCAGAAATCTGAGTTGAGTTTTCATCCAGGAACAGACAGAGGAGAGACACA
TCATGGATGTCCTGGCTGTCGGAAATCACTTCCCAGTACATCCAGCCTGCAGGCACGGCATGGAACTCAC
ACAAAGGAGAAACCTTACAGATGCCCTGACTGTGGGAAGTCATTCAGTTATGCATCCCACCTAAAGATCC
ATCTTCGAATACACACAGGTGAGAGGCCTTATGTGTGTTCTGACTGTGGGAAGGCCTTTAGCCAAAAGTC
AGTCCTCACCACGCATCGGAGAATCCACACTGGGGAGAGGCCTTACACATGTAACCACTGCGGGAAATTG
TTTGTCTATGCATCAGATCTGAAGAAACACAGTCGGTTTCACACAGGGGAGAAGCCCTATGAGTGCAGAG
ATTGTGGGAAGTTATTCAATAATAAATCTCACCTGCCTGTGCACTATCGCATTCACACCGGTGAGAAACC
TTACAGATGCTGCGACTGTGGGAAGTCGTTCAGGAGAAAGTCCCACCTTAAAGTGCATAGCCGAACACAC
ACTGGTGAGAAGCCTTATGAATGCCCTGACTGCGGAAGGGCCTTCAGCCACAGTTCAGTTCTCAGCACAC
ATCAGAGAATTCACACTGGGGAGAGGCCTTACCTATGCAGCGACTGTGGGAAGGCCATGTCTTCTAAAGC
CCAGCTGAATGAGCACCGAAGGATCCACACGGGGGAGAAACCCTATGTGTGCAGCGAGTGTGGGAAAGCT
TTCAGTTGCCGATCTTCCTTACAAGCACATCGTAGAACTCACAGTAGGGAAAAGCCGTTTGTCTGTCACA
CATGTGGGAAGGGCTTCCTGCACAAGTCACAGTTGTCATCTCACCAACAAACTCACACTGGTGAGAACCC
TTAG

Translation (607 aa):
MAADMNFCQKLQRLGTEEQDGPCERLVSFEDVTVNFSQEEWQHLDSAQRRLYQDVLLEIYSHLLVVGYSR
PEVILKMKKVKDSPMGKVDFPHQRCGQGEAEHDSHQMCVKAAFPNDVSRVITTGGSYCSIIEEPWQGGDP
KTSDPQNHIPPSSSGAFFSQKTLITDGREAAGGSIPLGAHVISTQKRSLRCCPCEKTLQPHLQADRDHQS
SATEQPDGIVDSCQSFTQGLPTAVCPIHSTGEEARRGDQCASVPSPQQPFMQHGTLSQDKPVEYTKYEKV
FTAGSALCQQQTTNPLETHFICHICGKSFLQKSELSFHPGTDRGETHHGCPGCRKSLPSTSSLQARHGTH
TKEKPYRCPDCGKSFSYASHLKIHLRIHTGERPYVCSDCGKAFSQKSVLTTHRRIHTGERPYTCNHCGKL
FVYASDLKKHSRFHTGEKPYECRDCGKLFNNKSHLPVHYRIHTGEKPYRCCDCGKSFRRKSHLKVHSRTH
TGEKPYECPDCGRAFSHSSVLSTHQRIHTGERPYLCSDCGKAMSSKAQLNEHRRIHTGEKPYVCSECGKA
FSCRSSLQAHRRTHSREKPFVCHTCGKGFLHKSQLSSHQQTHTGENP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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