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Report for CCDS31572.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31572.1 Public Homo sapiens 11 ZP1 24 110 108 CCDS HistoryNCBI Gene:22917Re-query CCDS DB by CCDS ID:31572.1See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31572.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000278853.10 ENSP00000278853.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000278853.10Link to Ensembl Protein Viewer:ENSP00000278853.5Re-query CCDS DB by Nucleotide ID:ENST00000278853Re-query CCDS DB by Protein ID:ENSP00000278853
Original member Current member NCBI NM_207341.4 NP_997224.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_207341.4Link to Protein Sequence:NP_997224.2Re-query CCDS DB by Nucleotide ID:NM_207341Re-query CCDS DB by Protein ID:NP_997224Link to BLAST:NP_997224.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_997224.2 638 P60852 638 100% 0 0

Chromosomal Locations for CCDS 31572.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 60867562 60867757 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 60869145 60869266 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 60869537 60869900 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 60870332 60870475 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 60870957 60871144 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 60871217 60871314 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 60873162 60873289 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 60873375 60873564 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 60873634 60873775 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 60874933 60875014 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 60875129 60875248 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 60875514 60875656 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1917 nt):
ATGGCAGGAGGCTCAGCCACGACCTGGGGTTACCCTGTGGCCCTGCTACTGCTGGTTGCCACCCTGGGGC
TG
GGTAGGTGGCTCCAGCCCGACCCTGGCCTCCCAGGCCTCCGGCACAGCTACGACTGTGGGATCAAGGG
A
ATGCAGCTGCTGGTGTTCCCCAGGCCAGGCCAGACTCTCCGCTTCAAGGTGGTGGATGAATTTGGGAAC
CGA
TTTGATGTCAACAACTGCTCCATCTGCTACCACTGGGTCACCTCCAGGCCGCAGGAGCCTGCAGTCT
TC
TCGGCCGATTACAGAGGCTGCCACGTGCTGGAGAAGGATGGGCGTTTCCACCTGAGGGTGTTCATGGA
G
GCTGTGCTGCCCAATGGTCGTGTGGATGTGGCACAAGACGCTACTCTGATCTGTCCCAAACCTGACCCC
TCC
CGGACTCTGGACTCCCAGCTGGCACCACCCGCCATGTTCTCTGTCTCAACCCCACAAACCCTTTCCT
TC
CTCCCCACCTCTGGCCATACCTCCCAAGGCTCTGGCCATGCCTTTCCCAGCCCACTGGACCCAGGGCA
C
AGCTCTGTCCACCCAACCCCTGCTTTACCATCCCCTGGACCTGGACCTACCCTCGCCACCCTGGCTCAA
CCC
CACTGGGGCACCTTGGAACACTGGGATGTGAACAAACGAGATTACATAGGTACCCACCTGAGCCAGG
AG
CAGTGCCAGGTGGCCTCAGGGCACCTCCCCTGCATCGTGAGAAGAACTTCAAAAGAAGCCTGTCAGCA
G
GCTGGCTGCTGCTATGACAACACCAGAGAGGTTCCCTGTTACTATGGCAACACAGCTACTGTCCAGTGC
TTC
AGAGATGGCTACTTCGTCCTCGTGGTGTCCCAAGAAATGGCCTTGACACACAGGATCACACTGGCCA
AC
ATCCACCTGGCCTATGCCCCCACCAGCTGCTCCCCAACACAGCACACGGAAGCTTTCGTGGTCTTCTA
C
TTCCCTCTCACCCACTGTGGAACCACAATGCAGGTGGCTGGCGACCAGCTCATCTATGAGAACTGGCTG
GTG
TCTGGCATCCACATCCAAAAGGGGCCACAGGGTTCCATCACGCGGGACAGCACCTTCCAGCTTCATG
TG
CGCTGTGTCTTCAACGCCAGTGACTTCCTGCCCATTCAGGCATCCATTTTCCCACCCCCATCGCCTGC
T
CCTATGACCCAGCCCGGCCCCCTGCGGCTTGAGCTGCGGATTGCCAAAGACGAGACCTTCAGCTCGTAC
TAT
GGGGAGGATGACTATCCCATCGTGAGGCTGCTCCGAGAACCAGTCCATGTGGAGGTCCGGCTTCTGC
AG
AGGACAGACCCCAACCTGGTCCTGCTGCTGCACCAGTGCTGGGGCGCTCCCAGTGCCAACCCCTTCCA
G
CAGCCCCAGTGGCCCATCCTGTCAGACGGATGCCCTTTCAAGGGCGACAGCTACAGAACCCAAATGGTA
GCC
TTGGACGGGGCCACACCTTTCCAGTCGCACTACCAGCGATTCACTGTTGCTACCTTCGCCCTCCTGG
AC
TCAGGCTCCCAGAGAGCCCTCAGAGGACTGGTTTACTTGTTCTGCAGCACCTCTGCCTGCCACACCTC
A
GGGCTGGAGACTTGCTCCACTGCATGTAGCACTGGCACTACAAGACAGCGACGATCCTCAGGTCACCGT
AAT
GACACTGCCAGGCCCCAGGACATCGTGAGCTCTCCGGGGCCAGTGGGCTTTGAGGATTCTTATGGGC
AG
GAGCCCACACTTGGGCCCACAGACTCCAATGGGAACTCCAGCCTGAGACCTCTCCTTTGGGCGGTCCT
T
TTGCTGCCAGCTGTTGCCCTGGTCCTTGGGTTTGGTGTCTTTGTGGGCCTGAGCCAGACCTGGGCCCAG
AAG
CTCTGGGAAAGCAACAGACAGTGA


Translation (638 aa):
MAGGSATTWGYPVALLLLVATLGLGRWLQPDPGLPGLRHSYDCGIKGMQLLVFPRPGQTLRFKVVDEFGN
R
FDVNNCSICYHWVTSRPQEPAVFSADYRGCHVLEK
DGRFHLRVFMEAVLPNGRVDVAQDATLICPKPDP
S
RTLDSQLAPPAMFSVSTPQTLSFLPTSGHTSQGSGHAFPSPLDPGHSSVHPTPALPSPGPGPTLATLAQ
P
HWGTLEHWDVNKRDYI
GTHLSQEQCQVASGHLPCIVRRTSKEACQQAGCCYDNTREVPCYYGNTATVQC
F
RDGYFVLVVSQEMALTHRITLANIHLAYAPTSCSPTQHTEAFVVFYFPLTHCGTTMQ
VAGDQLIYENWL
V
SGIHIQKGPQGSITRDSTF
QLHVRCVFNASDFLPIQASIFPPPSPAPMTQPGPLRLELRIAKDETFSSY
Y
GEDDYPIVRLLREPVHVEVRLLQRTDPNLVLLLHQCWGAPSANPFQQPQWPILSD
GCPFKGDSYRTQMV
A
LDGATPFQSHYQRFTVATFALLDSGSQRALRGL
VYLFCSTSACHTSGLETCSTACSTGTTRQRRSSGHR
N
DTARPQDIVSSPGPVGFEDSYGQEPTLGPT
DSNGNSSLRPLLWAVLLLPAVALVLGFGVFVGLSQTWAQ
K
LWESNRQ




Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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