CCDS Home FTP Process Releases & Statistics
Collaborators EBI HGNC MGI NCBI
Contact Us email CCDS
Genome Displays Related Resources Gene HomoloGene MANE RefSeq
|
|
Report for CCDS17442.2 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
17442.2 |
Public |
Mus musculus |
3 |
Fhip1a |
23 |
108 |
98 |
|
Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39
Review status: Reviewed (by RefSeq, Havana and CCDS collaboration) Sequence IDs included in CCDS 17442.2
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
---|
|
|
EBI |
ENSMUST00000094148.5 |
ENSMUSP00000091700.4 |
Accepted |
alive |
|
|
|
EBI |
ENSMUST00000118408.7 |
ENSMUSP00000113235.1 |
Accepted |
alive |
|
|
|
NCBI |
NM_172682.3 |
NP_766270.2 |
Accepted |
alive |
|
RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_766270.2 |
1081 |
Q505K2 |
1081 |
100% |
0 |
0 |
Chromosomal Locations for CCDS 17442.2
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (3246 nt): ATGATGTCATCGGTTTCTACAGAAAGCAAACTCCAGCAGGCTGTGAGCCTGAAGGGAGTTGACCCAGAAA CATGCATGATTGTGTTTAAGAACCACTGGGCACAGGTTGTGAAAATCTTAGAGAAGCATGACCCCTTGAA GAACACCCAGGCAAAATATGGGTCCATCCCCCCAGATGAGGCCAGTGCTGTGCAGAACTATGTAGAACAC ATGCTTTTCCTGCTAATCGAAGAGCAAGCCAAGGATGCTGCGATGGGGCCAATCCTGGAATTTGTGGTCT GCGAGAACATCATGGAAAAGCTCTTCCTTTGGAGCTTGAGACGAGAATTCACTGATGAAACCAAACTTGA GCAGCTAAAGATGTATGAGATGCTGGTCACTCAGTCCTACCAGCCTCTGCTGCACCACAAGCCCATCCTG AAGCCCCTCATGATGTTGCTGAGCTCCTGTTCGGGGACAGCCACCCCAGCTGTGGAGGGAAAGCTAGTTG TCCTGCTCAATCAGCTCTGCTCCATCCTTGCCAAAGATCCATCCATCCTGGAACTCTTCTTCCACACCAG TGAGGACCAAGGGGCTGCCAACTTCCTCATTTTCTCTCTTCTGATACCCTTCATTCATCGAGAGGGCACA GTAGGCCAGCAAGCAAGAGATGCTTTGCTATTTATCATGTCTCTCTCTGCTGAGAACAGCATGGTGGCCA ATCACATTGTGGAAAATACCTACTTCTGTCCCGTGCTTGCAACGGGACTCAGTGGCCTGTACTCTTCGCT GCCCACAAAGCTGGAAGAGAAGGGTGAGGACTGGCACTGCATTCTGAAGGACGACTGGCTCCTGCTGCCT GCCCTCGTGCAGTTCATGAACTCGCTGGAGTTCTGTAACGCAGTCATCCAGGTGGCTCACCCCTTGATCC GCACTCAGCTCGTCAGCTACATTTACAATGGATTTTTGGTACCAGTATTGGCTCCTGCACTCCATAAGGT GACGGTGGAGGAGGTCATGACCACAACAGCATACCTGGACCTCTTCCTGCGCAGCATCTCTGAGCCGGCG CTCCTGGAGATCTTCCTCCGCTTCATCCTCTTGCACCGGCATGAGAACGTTCACATCCTGGACACCCTCA CCAGCCGGATCAACACCCCTTTTCGGCTTTGTGTGGTGTCCTTGGCGCTGTTCAGAACTCTCATCGGCTT ACACTGTGAAGATGTGATGTTACAGCTAGTTTTAAGGTATCTGGTCCCCTGCAATCACATGATGCTGAGT CAAAGGTGGGCTGTGAAGGAGAGAGACTGTTACTCCGTGTCCGCTGCCAAGCTGCTTGCCTTGACCCCTG TCTGTTGTGCCAGTGGCATCACTTTGACACTTGGGAACCAAGAAAGGGATTATATTCTCTGGTCCAAGTG TATGCATGATGGCTCAGGATCTGAGGAGCAGCTGCTGCCAGAGACACCCTGCTCGCCCTCTTCACCTTCC CCTCCTCCCCCACCCGCCCCAGCAGCCTGCATTGTGGAGTATGGGAAGGCCCTGGACATCAGCTACCTGC AGTATCTGTGGGAGGCCCACACCAACATCCTCCACTGCATGAGGGACTGCAGAGTGTGGTCAGCCCTCTA TGATGGGGACTCACCTGACCCTGAGACCTTTCTGCAGAGTCTGTCAGAGGAGAGCCGAGAAAACTCAGGT CACCCAGAGGCCAGACTCCCACAGCAGAGTGTTAGGACTTCAGGACAGACAAAGGACAAGAGCCAGTCAG AGCTAGAATGGGATGACAGCTACGACACTGGTATCTCTTCAGGGGCAGATGTGGGCTCCCCCGGGCCTGA TGACGAGGTGGAGACCCCGGCCCCACCAGCACCTATTGATCCCCCCAAACACATCCAAGAGATGAAGAAG AACGCCATCCTCCTCTTCAAGGGGTCCTACATTGAGGAGTCAGACTTCCAGGATGACGTGATGGTATACA GGCTATGTGCTGAGAAGGACACAGAGGACACCACAGAGCCACAGAAGGACACTTCAGAGCCGCAGGGGGA CACCTTGGAGCCACTGGAGGACACTTCGGAGCAGCAGGAGGACACCTCAGAGCAGTTGGAGGACACCTCA GAGCTACAGGAGGACACTGCGGAGCCGCAGGGGGACACTGCAGACCCAACCGCTGAGGCTCAGCCCAAGC TCCAGCCGGAAGCCCAGAGTCTCCCCACGAGCAATGGACCTCTCTCTAGTCCCGATCCTGAGACAGAGTC ACAACCCAGCAGGGAGAGTTCAGACCTGTGTCAGAACACGTTCTCAGAAGCCAAGCCAGAGAATGAGCCT GGCGTAGCCTTAGCATTAGACTCGGAGTTGATAGCCACCACGTTTGAGGCGGAACCCCAGTCAGAATTGG CAGTTGTCAGCACGGAGAGTGAAGACTTCATTGCACAGTACGACCAGATCATTCAAGAACTGGACTCTGG CACTGAGGGCTTGACGGAGCAGAGCATCCCTATCTCAGAGCCCTCACTTCTTACACAGCAGGAAGAAAGG AGGGAAGAGTGCAAAGAGGAGGAGGACGATGACTTCGACTCCCTCATGGCGGCCACGCCTGCCGTGGAGG CCGGGTCATCCCCATTTGGTGTTGGAGAGGATACTGCCTTTAGCAGCCGCCATCCCGTGAGGACTCAGAG TACGCCGTTCACAGGCCCATTCATCAGCGTGGTCCTGTCAAAGCTGGAGAACATGCTGGAGAACTCTCTG CATGTCAACTTGCTTCTCATCGGCATCATCACCCAGCTGGCCAGCTACCCACAGCCGCTCCTTCGCTCCT TCCTCCTCAACACCAACATGGTCTTCCAGCCCAGCGTCCGCTCGCTCTACCAGGTCCTTGCATCGGTGAA AAACAAGATCGAGCAGTTTGCTTCTGTGGAGAGAGACTTCCCAGGCCTCCTCATCCAAGCTCAGCAGTAC CTGCTCTTCAGGGTGGACATGTCTGACATGGCCCCTGCGGCACTCACCAAAGATCCCATTCAGGAGATCT CCAGGCCAGAAAGTGACAAGACCCTTTTGGATGGCCCTCCACGTGTGCTTCAGCCCTTCCTAGGCAACAG AGCCAAGGTGACCAGGGCACCCCCAAACCTGCCTCTGCCAGTGAAGAACACCATGCTGGCTGCTGCTCTC TTCCCAGAGTTCCTGAAGGAGCTGGCAGCCTTGGCCCAAGAACACTCCATTCTGTGTTACAAGATCCTGG GAGACTTTGAAGACTCTTGCTGTTAG
Translation (1081 aa): MMSSVSTESKLQQAVSLKGVDPETCMIVFKNHWAQVVKILEKHDPLKNTQAKYGSIPPDEASAVQNYVEH MLFLLIEEQAKDAAMGPILEFVVCENIMEKLFLWSLRREFTDETKLEQLKMYEMLVTQSYQPLLHHKPIL KPLMMLLSSCSGTATPAVEGKLVVLLNQLCSILAKDPSILELFFHTSEDQGAANFLIFSLLIPFIHREGT VGQQARDALLFIMSLSAENSMVANHIVENTYFCPVLATGLSGLYSSLPTKLEEKGEDWHCILKDDWLLLP ALVQFMNSLEFCNAVIQVAHPLIRTQLVSYIYNGFLVPVLAPALHKVTVEEVMTTTAYLDLFLRSISEPA LLEIFLRFILLHRHENVHILDTLTSRINTPFRLCVVSLALFRTLIGLHCEDVMLQLVLRYLVPCNHMMLS QRWAVKERDCYSVSAAKLLALTPVCCASGITLTLGNQERDYILWSKCMHDGSGSEEQLLPETPCSPSSPS PPPPPAPAACIVEYGKALDISYLQYLWEAHTNILHCMRDCRVWSALYDGDSPDPETFLQSLSEESRENSG HPEARLPQQSVRTSGQTKDKSQSELEWDDSYDTGISSGADVGSPGPDDEVETPAPPAPIDPPKHIQEMKK NAILLFKGSYIEESDFQDDVMVYRLCAEKDTEDTTEPQKDTSEPQGDTLEPLEDTSEQQEDTSEQLEDTS ELQEDTAEPQGDTADPTAEAQPKLQPEAQSLPTSNGPLSSPDPETESQPSRESSDLCQNTFSEAKPENEP GVALALDSELIATTFEAEPQSELAVVSTESEDFIAQYDQIIQELDSGTEGLTEQSIPISEPSLLTQQEER REECKEEEDDDFDSLMAATPAVEAGSSPFGVGEDTAFSSRHPVRTQSTPFTGPFISVVLSKLENMLENSL HVNLLLIGIITQLASYPQPLLRSFLLNTNMVFQPSVRSLYQVLASVKNKIEQFASVERDFPGLLIQAQQY LLFRVDMSDMAPAALTKDPIQEISRPESDKTLLDGPPRVLQPFLGNRAKVTRAPPNLPLPVKNTMLAAAL FPEFLKELAALAQEHSILCYKILGDFEDSCC
|