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Report for CCDS51398.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
51398.1 Public Mus musculus 4 Megf6 23 108 98 CCDS HistoryNCBI Gene:230971Re-query CCDS DB by CCDS ID:51398.1See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 51398.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000030897.14 ENSMUSP00000030897.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000030897.14Link to Ensembl Protein Viewer:ENSMUSP00000030897.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000030897Re-query CCDS DB by Protein ID:ENSMUSP00000030897
Original member Current member NCBI NM_001162977.1 NP_001156449.1 Accepted alive Link to Nucleotide Sequence:NM_001162977.1Link to Protein Sequence:NP_001156449.1Re-query CCDS DB by Nucleotide ID:NM_001162977Re-query CCDS DB by Protein ID:NP_001156449Link to BLAST:NP_001156449.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001156449.1 1572 Q80V70 1572 99.7455% 0 4

Chromosomal Locations for CCDS 51398.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 4 (NC_000070.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 154171024 154171142 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 154177039 154177173 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 154182658 154182767 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 154224101 154224223 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 154242402 154242524 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 154249427 154249552 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 154250822 154250944 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 154252129 154252251 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 154252424 154252561 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 154253026 154253145 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 154253715 154253837 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 154254109 154254279 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 154254542 154254673 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 154255996 154256124 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 154258101 154258229 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 154258860 154258994 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 154259081 154259215 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 154262514 154262639 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 154263170 154263301 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 154263393 154263521 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 154263646 154263777 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 154265070 154265198 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 154265287 154265415 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 154265660 154265788 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 154266134 154266262 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 154266451 154266579 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 154267190 154267318 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 154267433 154267561 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 154267656 154267787 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 154267934 154268062 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 154268576 154268704 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 154269647 154269775 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 154269893 154270021 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 154270402 154270530 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 154270623 154270751 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 154271611 154271739 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 154273808 154273875 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4719 nt):
ATGCCTGTCGGGGTGGAGGCGAGGGCGTCTTGGCGCGTGGTGGCCCTGACGCTGCTGCTGCTCCCCGCCG
TGCCTGCAGCCTCCCAGCCGCTACCCCCGCGCCCGCTGCAGCCGAGCATGCCCCACGTGTGTGCAGAACA
GAAGCTGACCCTGGTGGGCCACCGCCAGCCTTGTGTGCAAGCCTTCAGCCGCGTAGTGCCTGTGTGGAGG
TCGGGCTGCGGGCAGCAGGCATGGTGTGTTGGCCAAGAGCGCAGGACTGTGTACTATATGAGCTACAGGC
AGGTGTATGCCACAGAGGCTCGCACTGTGTTCAGGTGCTGTCCTGGCTGGAGCCAGAAGCCTGGCCAGGA
AGGCTGCCTCTCAGATGTGGATGAATGTGCCAATGCCAACGGGGGCTGTGAGGGCCCGTGCTGCAACACC
GTGGGTGGCTTTTACTGTCGCTGCCCACCCGGCTACCAGCTGCAGGGTGATGGCAAAACGTGCCAAGATG
TGGATGAATGTCGATCACACAATGGTGGTTGTCAACACAGGTGTGTGAATACCCCCGGCTCTTACCTCTG
TGAGTGCAAACCCGGCTTCCGGCTCCACACAGATGGCAGGACCTGCCTGGCCATCAGCTCCTGCACTCTG
GGAAATGGTGGCTGCCAGCATCAGTGTGTACAGCTCACCGTGACACAGCACCGCTGCCAGTGCCGGCCCC
AGTACCAGCTGCAGGAGGATGGCAGGCGCTGTGTCCGGAGAAGCCCCTGTGCAGACGGCAATGGTGGCTG
TATGCATACATGCCAGGAACTCCGGGGCCTTGCCCACTGTGGCTGCCACCCAGGTTACCAGCTTGCTGCA
GACCGCAAAGCCTGTGAAGATGTGGACGAATGTGCCTTGGGTCTGGCCCAGTGTGCTCATGGCTGCCTCA
ACACTCAGGGGTCCTTTAAGTGTGTGTGTCACGCAGGCTATGAGCTGGGTGCTGATGGCCGGCAGTGTTA
CCGGATCGAGATGGAGATTGTGAACAGCTGCGAGGCTGGCAACGGAGGCTGCTCACACGGCTGTAGTCAC
ACTAGCACAGGGCCCCTGTGCACCTGCCCTCGTGGTTATGAGCTGGATGAGGACCAGAAGACCTGCATTG
ACATCGACGACTGCGCCAACTCTCCGTGCTGCCAGCAGGTGTGTGCCAACACCCCCGGTGGGTATGAGTG
TAGCTGCTTCGCCGGCTACAGACTCAACACAGACGGCTGTGGCTGTGAGGATGTTGACGAGTGTGCCTCT
GGTCACAGCGGCTGCGAACACCACTGTTCTAATCTGGCTGGCTCCTTCCAGTGCTTCTGTGAGGCTGGCT
ACCGGCTGGATGAGGACCGCAGGGGCTGCACGCCCCTAGAAGAATCCGTGGTGGACCTGGATGGCCAGCT
GCCCTTTGTCCGGCCCCTGCCCCACATTGCGGTGCTGGGGGATGAGCTTCCACAACTCTTCCAAGATGAC
TATGGGGCTGAGGAGGAGGCTGTGGCGGAGCTGCGGGGAGAACACACTCTCACTGAGAAGTTTGTCTGCT
TGGATCACTCCTTCGGCCATGACTGCAGCCTAACCTGCGATGACTGCAGGAATGGGGGGACCTGCTTCCC
GGGCCTGGATGGCTGTGACTGCCCAGAGGGCTGGACCGGGATCATCTGCAATGAGACTTGTCCTCCAGAC
ACTTTTGGGAAGAACTGTAGCTCTCCCTGCATCTGTCAGAATGGTGGGACCTGTGACCCGGTGTCAGGAG
CCTGCCGCTGTCCCCCAGGCGTCAGTGGAGCCCACTGTGAGGATGGCTGCCCCAAGGGCTTCTACGGCAA
ACACTGTCGTAAGAAATGCCACTGTGCTAACCGGGGCCGGTGCCACCGCCTCTATGGGGCCTGCCTCTGT
GACCCAGGCCTCTATGGCCGTTTCTGTCACCTTGCTTGCCCTCCCTGGGCCTTTGGACCGGGCTGTTCTG
AGGACTGCCTTTGTGAGCAGTCACACACAAGATCTTGTAACTCGAAGGATGGCAGCTGCTCCTGCAAGGC
CGGCTTCCAGGGCGAGCGCTGCGAGGCGGAGTGCGAGCCAGGCTCCTTTGGGCCAGGCTGCAGAAACCGT
TGCACCTGCCGGCCAGGTGTGGCCTGTGACCCTGTGAGTGGCGAGTGTCGGACGCAGTGTCCTCCTGGCT
ACCAGGGGGAGGACTGTGGCCAAGAGTGCCCAGTGGGGACATTTGGTGTGAACTGCTCAGGTTCCTGCTC
CTGCGTGGGGGCCCCCTGTCACCGAGTCACGGGGGAGTGTCTGTGCCCACCAGGGAAGACTGGGGAGGAC
TGTGGAGCCGACTGTCCCGAGGGCCGTTGGGGGCTCGGCTGTCAAGAGATCTGCCCTGCATGTGAGCATG
GTGCCAGCTGCGACCCTGAGACTGGAACCTGCCTGTGTCTTCCTGGTTTTGTTGGTAGCCGCTGCCAGGA
TGCTTGCCCAGCAGGCTGGTTTGGGACCGGCTGCCAGATGAGGTGTGCTTGTGCCAATGATGGGCATTGC
CATCCGGCCACTGGACGCTGTAGCTGTGCCCCTGGGTGGACTGGCCTCAGCTGCCAGAGAGCCTGTGACA
GTGGACACTGGGGGCCTGACTGCATCCACCCCTGCAACTGCAGTGCAGGCCATGGGAACTGTGACGCCGT
CAGTGGCCTCTGCCTGTGTGAGGCTGGCTACGAAGGTCCGCAGTGTGAGCAGTGGTGTCGCCAAGGCTAC
TTTGGGCCCGGCTGCGAGCAGAAGTGCAGGTGTGAGCATGGGGCCACCTGTGACCATGTCAGTGGGGCCT
GTACCTGCCCAGCTGGCTGGAGGGGAAGCTTCTGCGAGCACGCCTGTCCTGCTGGCTTCTTTGGGTTAGA
CTGTGGCAGTGCCTGCAACTGCTCCGCCGGGGCCCCCTGTGATGCTGTCACTGGCTCGTGCATCTGCCCA
GCTGGCCGCTGGGGCCCACACTGTGCCCAGACTTGCCCACCTCTCACCTTTGGGCTTAACTGCAGCCAGA
TTTGTACCTGTTTCAATGGGGCCTCTTGCGACCCTGTCCTTGGGCAGTGCCACTGTGCTCCTGGCTGGAT
GGGACCCACCTGCCTGCAGGCCTGCCCTGCTGGCCTGTATGGCAAGAACTGTCAGCATTCCTGTCTCTGC
CGAAATGGAGGGAACTGTGACCCCATCTTGGGCCAGTGCACGTGCCCAGAGGGTTGGACCGGCTTGGCCT
GTGAGAACGAGTGCCTTCCTGGACACCATGGGGCTGGTTGCCGGCTCAACTGCAGTTGCCTTAATGGGGG
CACATGTGACCGTCTTACTGGCCACTGCCGCTGCCCAACTGGCTGGACTGGGGACAAGTGTCAGAGCCCC
TGCGTCAGTGGCATGTTTGGGGTTCACTGTGAGGAGCACTGTGCCTGCCGGAAAGGTGCCACCTGTCACC
ATGTCACGGGGGCCTGCCTCTGTCCCCCAGGATGGAGGGGCTCACACTGTGAACAGGCCTGTCCACGTGG
CTGGTTTGGAGAGGCCTGTGCTCAGCGTTGCCACTGCCCGCCTGGTGCCTCCTGCCACCATGTCTCTGGA
GAGTGCCACTGTCCACCCGGCTTCACTGGGCCTGGCTGTGAGCAGGCCTGCCAGCCTGGCACCTTTGGCA
AGGACTGTGAGCACCCGTGCCAATGTCCTGGTGAGACCTGGGCCTGCCACCCTGCTTCAGGGGCCTGCGT
ATGTGCTGCTGGTTACCATGGCACCGACTGTCAGCAACGATGCCCATCTGGGCGCTATGGGCCAGGCTGT
GAACAAATTTGTAAGTGTCTCAATGGTGGGACCTGCGATCCAGCCACGGGAGCCTGCTACTGCCCTGCTG
GGTTCCTTGGGGCCGACTGTAGCCTTGCCTGTCCACAGGGTCGCTTCGGCCCCAGCTGTGCCCACGTGTG
TACATGCGGGCAAGGGGCGGCATGTGACCCAGTGTCGGGGACTTGCATCTGTCCTCCCGGGAAGACGGGA
GGCCATTGTGAGCGCGGCTGTCCCCAGGACCGGTTTGGCAAGGGCTGTGAACACAAGTGTGCCTGCAGGA
ATGGGGGCCTGTGTCATGCTACCAATGGCAGCTGCTCCTGCCCCCTGGGCTGGATGGGGCCACACTGTGA
GCACGCCTGCCCTGCTGGGCGCTATGGTGCTGCCTGCCTCCTGGAGTGTTCCTGTCAGAACAATGGCAGC
TGTGAGCCCACCTCCGGCGCTTGCCTCTGTGGCCCTGGCTTCTATGGTCAAGCTTGTGAAGACACCTGCC
CTGCCGGCTTCCATGGATCTGGTTGCCAGAGAGTTTGCGAGTGTCAACAGGGCGCTCCCTGTGACCCTGT
CAGTGGCCGGTGCCTCTGCCCTGCTGGCTTCCATGGCCAGTTCTGCGAGAGGGGGTGCAAGCCAGGCTTT
TTTGGAGATGGCTGCCTGCAGCAGTGTAACTGCCCCACGGGTGTGCCCTGTGATCCCATCAGCGGCCTCT
GCCTTTGCCCACCAGGGCGTGCAGGAACCACATGTGACCTAGATTGCAGAAGAGGCCGCTTTGGGCCGGG
CTGTGCCCTGCGCTGTGATTGTGGGGGTGGGGCTGACTGCGACCCCATCAGTGGGCAGTGCCACTGTGTG
GACAGCTACACGGGACCCACTTGCCGGGAAGTGCCCACACAGCTGTCCTCTATCAGACCAGCACCCCAGC
ACTCCAGCAGCAAGGCCATGAAGCACTAA

Translation (1572 aa):
MPVGVEARASWRVVALTLLLLPAVPAASQPLPPRPLQPSMPHVCAEQKLTLVGHRQPCVQAFSRVVPVWR
SGCGQQAWCVGQERRTVYYMSYRQVYATEARTVFRCCPGWSQKPGQEGCLSDVDECANANGGCEGPCCNT
VGGFYCRCPPGYQLQGDGKTCQDVDECRSHNGGCQHRCVNTPGSYLCECKPGFRLHTDGRTCLAISSCTL
GNGGCQHQCVQLTVTQHRCQCRPQYQLQEDGRRCVRRSPCADGNGGCMHTCQELRGLAHCGCHPGYQLAA
DRKACEDVDECALGLAQCAHGCLNTQGSFKCVCHAGYELGADGRQCYRIEMEIVNSCEAGNGGCSHGCSH
TSTGPLCTCPRGYELDEDQKTCIDIDDCANSPCCQQVCANTPGGYECSCFAGYRLNTDGCGCEDVDECAS
GHSGCEHHCSNLAGSFQCFCEAGYRLDEDRRGCTPLEESVVDLDGQLPFVRPLPHIAVLGDELPQLFQDD
YGAEEEAVAELRGEHTLTEKFVCLDHSFGHDCSLTCDDCRNGGTCFPGLDGCDCPEGWTGIICNETCPPD
TFGKNCSSPCICQNGGTCDPVSGACRCPPGVSGAHCEDGCPKGFYGKHCRKKCHCANRGRCHRLYGACLC
DPGLYGRFCHLACPPWAFGPGCSEDCLCEQSHTRSCNSKDGSCSCKAGFQGERCEAECEPGSFGPGCRNR
CTCRPGVACDPVSGECRTQCPPGYQGEDCGQECPVGTFGVNCSGSCSCVGAPCHRVTGECLCPPGKTGED
CGADCPEGRWGLGCQEICPACEHGASCDPETGTCLCLPGFVGSRCQDACPAGWFGTGCQMRCACANDGHC
HPATGRCSCAPGWTGLSCQRACDSGHWGPDCIHPCNCSAGHGNCDAVSGLCLCEAGYEGPQCEQWCRQGY
FGPGCEQKCRCEHGATCDHVSGACTCPAGWRGSFCEHACPAGFFGLDCGSACNCSAGAPCDAVTGSCICP
AGRWGPHCAQTCPPLTFGLNCSQICTCFNGASCDPVLGQCHCAPGWMGPTCLQACPAGLYGKNCQHSCLC
RNGGNCDPILGQCTCPEGWTGLACENECLPGHHGAGCRLNCSCLNGGTCDRLTGHCRCPTGWTGDKCQSP
CVSGMFGVHCEEHCACRKGATCHHVTGACLCPPGWRGSHCEQACPRGWFGEACAQRCHCPPGASCHHVSG
ECHCPPGFTGPGCEQACQPGTFGKDCEHPCQCPGETWACHPASGACVCAAGYHGTDCQQRCPSGRYGPGC
EQICKCLNGGTCDPATGACYCPAGFLGADCSLACPQGRFGPSCAHVCTCGQGAACDPVSGTCICPPGKTG
GHCERGCPQDRFGKGCEHKCACRNGGLCHATNGSCSCPLGWMGPHCEHACPAGRYGAACLLECSCQNNGS
CEPTSGACLCGPGFYGQACEDTCPAGFHGSGCQRVCECQQGAPCDPVSGRCLCPAGFHGQFCERGCKPGF
FGDGCLQQCNCPTGVPCDPISGLCLCPPGRAGTTCDLDCRRGRFGPGCALRCDCGGGADCDPISGQCHCV
DSYTGPTCREVPTQLSSIRPAPQHSSSKAMKH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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