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Report for CCDS21681.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21681.1 Public Mus musculus 7 Or6b9 23 108 98 CCDS HistoryNCBI Gene:233670Re-query CCDS DB by CCDS ID:21681.1See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21681.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000040983.5 ENSMUSP00000048740.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000040983.5Link to Ensembl Protein Viewer:ENSMUSP00000048740.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000040983Re-query CCDS DB by Protein ID:ENSMUSP00000048740
Original member Current member EBI ENSMUST00000213552.1 ENSMUSP00000149346.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000213552.1Link to Ensembl Protein Viewer:ENSMUSP00000149346.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000213552Re-query CCDS DB by Protein ID:ENSMUSP00000149346
Original member Current member EBI ENSMUST00000213651.1 ENSMUSP00000149919.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000213651.1Link to Ensembl Protein Viewer:ENSMUSP00000149919.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000213651Re-query CCDS DB by Protein ID:ENSMUSP00000149919
Original member Current member EBI ENSMUST00000219365.1 ENSMUSP00000151272.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000219365.1Link to Ensembl Protein Viewer:ENSMUSP00000151272.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000219365Re-query CCDS DB by Protein ID:ENSMUSP00000151272
Original member Current member NCBI NM_206897.2 NP_996780.2 Accepted alive Link to Nucleotide Sequence:NM_206897.2Link to Protein Sequence:NP_996780.2Re-query CCDS DB by Nucleotide ID:NM_206897Re-query CCDS DB by Protein ID:NP_996780Link to BLAST:NP_996780.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_996780.2 316 P34986 316 99.3671% 0 2

Chromosomal Locations for CCDS 21681.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 106955984 106956934 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (951 nt):
ATGGAAAACATCACCAACATCAGTGAGTTCATCCTCATGGGCTTCCCTACTGCTCCATGGCTGCAAATTC
TGCTTTTCTCCATCTTCTTCATAACTTATGTGTTTGTGCTTTTGGAAAATCTGGTCATCATTCTTACTGT
ATGGGTCACTGGGTCACTGCACAAGCCTATGTACTATTTTCTGAGTACTATGTCCTTTCTGGAGGCCTGG
TATATATCTGTCACTGTCCCTAAGATGCTGGCTGGATTCCTATTTCACCCCAATACCATTTCTTTCTTGG
GATGTATGACTCAGCTTTACTTCTTTATGTCCCTTGCCTGTACTGAATGTGTACTTTTAGCTGCCATGGC
CTATGATCGTTATGTAGCCATATGTTGGCCTCTTCGCTATCCAGTCATGATGACCACAGGATTTTGTGTT
CAACTGACCATCAGTTCTTGGGTGAGTGGCTTCACCATCTCCATGGCAAAGGTGTACTTTCTCTCACGAG
TTGCCTTCTGTGGCAATAATGTCTTGAACCATTTTTTCTGTGATGTGTCACCCATCCTTAAGTTAGCTTG
TATGAACTTATCTATGGCTGAGACAGTAGATTTTGCCCTTGCCATCGTCATCCTTATATTCCCACTCTCA
GCCACTGTTCTTTCCTATGGCTTCATTGTCTCTACTGTCCTGCAAATACCATCAGCCACTGGGCAGCGGA
AGGCCTTCTCCACCTGTGCTTCTCATCTTACAGTGGTGGTCATCTTCTACACAGCTGTGATCTTCATGTA
TGTCCGACCTCGGGCCATTGCTTCGTTTAATTCTAACAAGCTGATCTCAGCCATCTATGCAGTCTTCACT
CCCATGCTCAACCCCATTATCTACTGCCTGAGGAACAAGGAAGTCAAAGATGCCATCAGAAAAACCATAG
CAGGTGGTAGAGCACCGGCCTTGGGAGAGTCTATTTCTTAA

Translation (316 aa):
MENITNISEFILMGFPTAPWLQILLFSIFFITYVFVLLENLVIILTVWVTGSLHKPMYYFLSTMSFLEAW
YISVTVPKMLAGFLFHPNTISFLGCMTQLYFFMSLACTECVLLAAMAYDRYVAICWPLRYPVMMTTGFCV
QLTISSWVSGFTISMAKVYFLSRVAFCGNNVLNHFFCDVSPILKLACMNLSMAETVDFALAIVILIFPLS
ATVLSYGFIVSTVLQIPSATGQRKAFSTCASHLTVVVIFYTAVIFMYVRPRAIASFNSNKLISAIYAVFT
PMLNPIIYCLRNKEVKDAIRKTIAGGRAPALGESIS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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