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Report for CCDS22362.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
22362.1 |
Public |
Mus musculus |
8 |
Sugp2 |
23 |
108 |
98 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:234373](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:22362.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 8 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 22362.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENSMUST00000093458.10 |
ENSMUSP00000091167.4 |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENSMUST00000093458.10](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSMUSP00000091167.4](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENSMUST00000093458](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSMUSP00000091167](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENSMUST00000131489.7 |
ENSMUSP00000114833.1 |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENSMUST00000131489.7](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSMUSP00000114833.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENSMUST00000131489](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSMUSP00000114833](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENSMUST00000164403.7 |
ENSMUSP00000128029.1 |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENSMUST00000164403.7](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSMUSP00000128029.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENSMUST00000164403](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSMUSP00000128029](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
|
NCBI |
NM_001168290.1 |
NP_001161762.1 |
Updated |
not alive |
![Link to Nucleotide Sequence:NM_001168290.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001161762.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001168290](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001161762](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
|
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001168290.2 |
NP_001161762.1 |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001168290.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001161762.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001168290](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001161762](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001161762.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
|
NCBI |
NM_172755.3 |
NP_766343.3 |
Updated |
not alive |
![Link to Nucleotide Sequence:NM_172755.3](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_766343.3](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_172755](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_766343](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
|
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_172755.4 |
NP_766343.3 |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_172755.4](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_766343.3](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_172755](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_766343](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_766343.3](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 22362.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (3204 nt): ATGGCAGCAAGGCGGATGGCGCAGGAATCTTTGGACAGTGTATTACAGGAGAAATCTAAACGGTATGGGG ATTCCGAAGCTGTTGGTGAAGCTCTCCATCTTAAAGCTCAAGATCTCCTAAGGACAGGCTCAAGAGCCAG AGCAGATGTCTATGAGGACATTCATGGTGATAGCAGGTACTCCGCCAGTGGATCTGGAGTGTATTCACTA GACATGGGAAGAGAGGGTCTGAGAGGTGACATGTTTGTGGGACCCTCCTTCAGATCTAGCAACCAGTCGG TTGGTGAAGACAGCTATCTTCGCAAAGAATGTGGCCGGGATCTGGAACCAGCCCATACTGACTCCCGGGA CCAGAGTTTTGGCCACCGGAATCTGGGACATTTTCCTTCTCAGGACTGGAAACTTGCGCTCCGTGGCTCT TGGGAACAAGACTTGGGCCACTCAGTTTCTCAAGAATCCTCCTGGTCACAGGAATATGGTTTTGGGCCCT CATTGTTAGGAGACTTGGCCTCCTCCAGGCGGATGGAGAAGGAAAGTCGGGATTATGACCTGGACCATCC TGGGGAGGTGGACTCTGTGTCTAGAAGCAGTGGGCAAGTCCTGACCAGAGGCCGATCTCTAAACATAGCT GACCAGGAAGGCACTCTACTAGGAAAGGGGGACACCCAGGGTCTGCTTGGAGCAAAGGGTGTTGGGAAGC TTATCACACTGAAAAGCATGACCACGAAGAAAATACCTGTTGCCAGTCGTATTACTTCCAAACCTCAGGG CACTAACCAAATCCAGAAACCCACTCCAAGTCCTGATGTGACCATTGGGACAAGTCCAGTGCTAGATGAA ATCCAGTTCGCTGCTCTGAAGATTCCTTTGGGGCTGGACCTTAGGACCCTTGGCTTGCCCAGAAGGAAGA TGGGTTTTGATGCCATAGACAAGGCAGATGTGTTCTCAAGGTTTGGCATAGAGATCATCAAGTGGGCAGG ATTCCACACTATCAAGGATGACCTGAAGTTCTCCCAACTCTTCCAGACTCTTTTTGAACTGGAAACTGAG ACCTGTGCCAAGATGCTGGCCTCCTTCAAATGCTCCTTGAAGCCGGAGCATAGAGATTTCTGCTTTTTTA CCATCAAGTTTCTAAAGCACTCTGCTCTGAAAACGCCCCGAGTTGATAATGAGTTTTTAAACATGCTTTT AGACAAAGGTGCTGTGAAGACCAAAAACTGCTTTTTTGAGATCATCAAGCCCTTCGACAAGTCCATCATG CGGCTCCAGGACCGACTGCTGAAGGGCGTCACACCCTTACTCATGGCCTGTAATGCCTATGAACTGAGTG TCAAGATGAAGACCCTCACTAGCCCATTGGACCTGGCTATGGCCCTGGAGACCACCAACTCTCTTTGCAG GAAGTCCCTGGCCCTCTTAGGCCAGACCTTCTCCTTGGCTTCTTCCTTCCGGCAGGAGAAGATCCTAGAG GCTGTGGGCCTCCAAGACATCGCTCCATCCCCGGCCTACTTCCCAAATTTTGAAGATTCCACTTTGTTCG GAAGGGAGTACATAGACCACCTGAAGGCCTGGCTCATGGCCAGTGGCTATCCCCTCCAGCTCAAGAGAGC TGTGCCCCCAGAGTCCCGAGAACAGAAAACCACAGCTCAGACCTGGGCTTCGAGCACTCTGAGCCAAGCA GTTCCCCAGCGGGCGGATCACAGGGTGGTGGACACCATTGACCAGCTTGTCATGCGTGTCATCCAAGGAA GGCTATCGCCCAGAGAGAGAACACTTCTCCTACAGGACCCTGCTTACTGGTTTCTGTCTGATGAGAGTAG CCTGGAGTATAAGTACTACAAGCTGAAGTTGGCAGAGTCACAGCGACTGAACCACAGCTGGCCCATTGTG GAGCGGAGGCCAACGCCCGCACAGTGTGCGGTGCGTGCCATGCTGTATGCACAAGCTGTGCGAAGCCTCA AGCGCAGACTCCTCCCATGGCAGCGCAGGCGGCTGATTCGCTCCCAGGGTCCTCGAGGCCTGAAGGCCAA GAAAGCCACCACTGCCCAGCAGACATCCCTGTCCTCAGGCACTCGGCAGAAACACCATGGCCGCCAGGCT TCTGGCTCCTTGAGGGTGAAGCCACCACCACGGGATTCAAGTGATGCTGCCCAGGACTGCCTATCAGAGC CTGCCAAACCCTGTCCTCAGCCCTCCAGCCCTGGAGCCTTGGGCCCGTCTCCTCGGCCAACTGGAGCGGA TGACTCAGAAGCCCTGCCGGCCTCTTCTCGATGCCCCTCTGCTAATATGGATGCAAAGACCATGGAGACT GCTGAGAAGCTGGCCAGATTTGTGGCTCAGGTCGGCCCTGAGATTGAGCAGTTCAGCATAGAGAACAGCA CTGACAACCCTGACCTGTGGTTCCTGCACGACCAGAGCAGCTCAGCTTTCAAGTTCTACCGAGAGAAGGT GCTGGAACTGTGCCCATCCATCTCCTTCCAGTCCACTGGTGAGGCAGGGGACTCAGTACAGAGCCCCACA GCTGGCAAGGAGGGTAAGGGTGAGCCACAGGAGGGGCACCCTGAGCAGGAGGCTTCACTGGAGGGCACTG AGGTGCTGCCTGAGGAGGAAGAGGAAGATGAGGAGGAGAGCGAGGACGAGGGTGGAGAGGAGACCTCCAC TCTCAGGCCACAGGCAGGAGCTGCCAAGTGTCCAGGCTCTGAGGGCAGTTCCCCTACTGACAGCATCCCT GGAGAGGGGTCCAGGGAGGACCAGGCCAGCACCCCTGGCCTGTCCCAGGCCTCCTCTGGCAGCTGCTTCC CCAGGAAGAGAATCAGCAGCAAGTCGCTGAAAGTTGGCATGATCCCTGCCCCAAAGAGGGTGTGTCTCAT CCAGGAGTCAAAGGTCCACGAACCAGTTCGAATTGCCTACGACAGGCCTAGGGGTCGTCCCATAGCCAAA AAGAAGAAACCCAAGGACATGGAGTTTTCCCAGCAGAAACTGACAGACAAGAACGTGGGCTTCCAGATGC TGCAGAAGATGGGCTGGAAGGAAGGCCATGGCCTGGGCTCCCTTGGGAAGGGCATCCGAGAGCCCGTCAG TGTGGGTGCTCTTTCAGAAGGAGAGGGCCTGGGAGCTGATGGGCCTGAGCAGAAAGAAGACACCTTTGAC GTCTTCCGCCAGCGCATGATGCAAATGTACAGACACAAGCGGGCCAGCAAATAG
Translation (1067 aa): MAARRMAQESLDSVLQEKSKRYGDSEAVGEALHLKAQDLLRTGSRARADVYEDIHGDSRYSASGSGVYSL DMGREGLRGDMFVGPSFRSSNQSVGEDSYLRKECGRDLEPAHTDSRDQSFGHRNLGHFPSQDWKLALRGS WEQDLGHSVSQESSWSQEYGFGPSLLGDLASSRRMEKESRDYDLDHPGEVDSVSRSSGQVLTRGRSLNIA DQEGTLLGKGDTQGLLGAKGVGKLITLKSMTTKKIPVASRITSKPQGTNQIQKPTPSPDVTIGTSPVLDE IQFAALKIPLGLDLRTLGLPRRKMGFDAIDKADVFSRFGIEIIKWAGFHTIKDDLKFSQLFQTLFELETE TCAKMLASFKCSLKPEHRDFCFFTIKFLKHSALKTPRVDNEFLNMLLDKGAVKTKNCFFEIIKPFDKSIM RLQDRLLKGVTPLLMACNAYELSVKMKTLTSPLDLAMALETTNSLCRKSLALLGQTFSLASSFRQEKILE AVGLQDIAPSPAYFPNFEDSTLFGREYIDHLKAWLMASGYPLQLKRAVPPESREQKTTAQTWASSTLSQA VPQRADHRVVDTIDQLVMRVIQGRLSPRERTLLLQDPAYWFLSDESSLEYKYYKLKLAESQRLNHSWPIV ERRPTPAQCAVRAMLYAQAVRSLKRRLLPWQRRRLIRSQGPRGLKAKKATTAQQTSLSSGTRQKHHGRQA SGSLRVKPPPRDSSDAAQDCLSEPAKPCPQPSSPGALGPSPRPTGADDSEALPASSRCPSANMDAKTMET AEKLARFVAQVGPEIEQFSIENSTDNPDLWFLHDQSSSAFKFYREKVLELCPSISFQSTGEAGDSVQSPT AGKEGKGEPQEGHPEQEASLEGTEVLPEEEEEDEEESEDEGGEETSTLRPQAGAAKCPGSEGSSPTDSIP GEGSREDQASTPGLSQASSGSCFPRKRISSKSLKVGMIPAPKRVCLIQESKVHEPVRIAYDRPRGRPIAK KKKPKDMEFSQQKLTDKNVGFQMLQKMGWKEGHGLGSLGKGIREPVSVGALSEGEGLGADGPEQKEDTFD VFRQRMMQMYRHKRASK
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