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Report for CCDS22508.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
22508.1 Public Mus musculus 8 Heatr3 23 108 98 CCDS HistoryNCBI Gene:234549Re-query CCDS DB by CCDS ID:22508.1See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 22508.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000034079.13 ENSMUSP00000034079.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000034079.13Link to Ensembl Protein Viewer:ENSMUSP00000034079.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000034079Re-query CCDS DB by Protein ID:ENSMUSP00000034079
Original member Current member NCBI NM_172757.3 NP_766345.3 Accepted alive Link to Nucleotide Sequence:NM_172757.3Link to Protein Sequence:NP_766345.3Re-query CCDS DB by Nucleotide ID:NM_172757Re-query CCDS DB by Protein ID:NP_766345Link to BLAST:NP_766345.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_766345.3 679 Q8BQM4 679 100% 0 0

Chromosomal Locations for CCDS 22508.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 88138020 88138157 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 88138275 88138447 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 88139892 88139979 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 88141672 88141781 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 88144529 88144638 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 88147547 88147687 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 88150092 88150369 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 88156462 88156552 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 88156670 88156827 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 88157053 88157135 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 88158129 88158265 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 88161878 88161966 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 88164888 88165031 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 88166996 88167172 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 88170859 88170981 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2040 nt):
ATGGGTAAGAGTCGGACGAAGCGCTTCAAGCGACCTCAGTTCTCCCCTATCGAGAGCTGTCAGGCCGAGG
CG
GCGGCCGCGTCGAACGGGACTGGGGACGAGGAGGACGATGGGCCCGCGGCGGAGCTTCTGGAGAAGCT
C
CAGCACCCGAGCGCCGAGGTCCGCGAGTGCGCCTGCGCGGGACTGGCCCGGCTAGTGCAGCAGCGGCCC
GCA
CTACCAGACTTAGCCCGTCGGGATGCTGTGCGCCGGCTCGGGCCGCTGCTGCTGGACTCGAGTCTGG
CG
GTAAGGGAGACGGCGGCCGGAGCTCTGAGAAACCTCAGTGCTTGTGGAGGTTTTGACGTTTGTGATGA
C
ATGGTGGCAAAGGACATCATGACGCCCCTGGTGGCACTACTGAGAGAGTGTCTCTCTGGACTGGATTCA
AAT
GAGATGTCTCCACAGGAGAAAGCTGATAAGAGAAATCCTGTAGAGAGCATAGCCAATGAGGCTGTGA
AT
GTGCTGTGGAATGTGTGTGAATGCAGTGGCAGAGCAGTGTCTATATTCAACAAAGAAGGGTGTTTGGA
G
ATTGTGTTACAGTACTTACGTAGGTTCCCCACCAGTATTGACCTGGCTGTCTCCGTAGCGTATTGTTTA
CAG
ACAGTGACGGAAGATAACCCAGAGCTCCTGAAATCTTTTGATGGCACAGCACTACGTGTGCTGGAGT
CT
GCTTTGCTTTGTCCTGTCGCCTCTATGGAATACATTCTTTTAAAGACACTGGTGGCAGGCACCATCTG
G
AACCTAAAGGACATTATTCCATCTAAGAGTCAGGCAGAAATCATTAATGCCATCCTAGGTGCCTTGTCT
GAA
GTTCTGGGTATGAATACTGGCAACATGGTCATTCAGATGAAGGAAGCTGAAACCCAGCGGCTAAAGA
CT
GCCGCAGAGAGTGAGGACATCCTAGCAAATGCTAACGGTGATGACTTGGTTGAAGATGATGAAATGGA
A
GAAATCCCTCATAAAAGAAAACTCAGAAGGAAAACATTTATTTCCGATTTACTTCCACCTACTGACAAG
GAG
CTGCGAGAGGCCATGGCGTTGCTGACAGCTCAGCAGACTGCTCTGGAAGTTATTGTCAACATGTGCT
GC
AGTGAAGATCCCTCGGATGATGAGTGGGAAGAACTGTCTAGTAGTGATGAAAGTGAAGCCTTTATGGA
A
AACTCCTTCAGTGAGTGCAGTGGGCACCTGATGTCCCCATTGTGCCTGTCCCACGAGATTCACTCTGCC
CTT
ACCAACTGCCTCATTCCAGAGAAGGTTTTTGAGAAAACATCTTCACCAAACAGTGTTGCAGTTGACA
TA
TGTTCTAAGAACCCTACTTGGAAACCTTTGATTAGGAAAATGAACACTATTCAGTGTAGAGCCCTTAT
G
TGTCTCCAGAGTCTTGTGTCTCTCCTGGACATAGACCATCTCGGTGGAGCCCCTGCTCTCCAGACTCTT
GCT
CAGCACCTGTCACAGATTCTTTTTTCTCAGCCAGATTTTGCTAAACATGATGATTTTCTAGAAGCCA
TA
AGTAGTGCTTTGAGGGCCCTTTTGCAAACAATGGCCTCCAAGAACATTCCACAGTGTATGACCCCTGA
G
CAGCTGATGACGCTGTGCAGAGAAGGCATTCATAGCAGTAGCATTGGGGTTCGAGTGAATGTGGTCAGT
ATT
TTGGGGATCACTGGGAGCGTCCTAGCCAAAGACGACGGCACACTTGACACTCTGAAGACCATTGGGT
GC
TTTCTGCTGGAAGTCGCCACCAAAGACCCTTCCCTTGTGGTAACAGGCGAGGCTCTGGATGCCCTCTT
C
GATGTTTTTGCAGATGGCGAAGCAGCTGAAAAGGCTTCAGTTCAAATTAAATTGTTAGCGGCTTTGAAA
GAA
TTCCAACCAGTCTTCAAAATGAAGATACGGAAAGAAGGGAGGGGCAAGTACAGTCCAGACCAGCTGT
GT
GTTCTCGACAATGTGAAGATGAATTTGAGACGGTTTATTGCTTACCAGGAAACTGTTGAGAAAAGACT
G
ACTTCTTAA


Translation (679 aa):
MGKSRTKRFKRPQFSPIESCQAEAAAASNGTGDEEDDGPAAELLEKLQHPSAEVRECACAGLARLVQQRP
A
LPDLARRDAVRRLGPLLLDSSLAVRETAAGAL
RNLSACGGFDVCDDMVAKDIMTPLVALLRECLSGLDS
N
EMSPQEKADKRNPVESIANEAVNVLWNV
CECSGRAVSIFNKEGCLEIVLQYLRRFPTSIDLAVSVAYCL
Q
TVTEDNPELLKSFDGTALRVLESALLCPVASMEYILLKTLVA
GTIWNLKDIIPSKSQAEIINAILGALS
E
VLGMNTGNMVIQMKEAETQRLKTAAESEDILANANGDDLVEDDEMEEIPHKRKLRRKTFISDLLP
PTDK
E
LREAMALLTAQQTALEVIVNMCCSE
DPSDDEWEELSSSDESEAFMENSFSECSGHLMSPLCLSHEIHSA
L
TNCLIPEK
VFEKTSSPNSVAVDICSKNPTWKPLIRKMNTIQCRALMCLQSLVSLLDIDHLGGAPALQTL
A
QHLSQILFSQP
DFAKHDDFLEAISSALRALLQTMASKNIPQCMTPEQLMTLCREGIHSSSIGVRVNVVS
I
LGITGSVLAKDDGTLDTLK
TIGCFLLEVATKDPSLVVTGEALDALFDVFADGEAAEKASVQIKLLAALK
E
FQPVFKMK
IRKEGRGKYSPDQLCVLDNVKMNLRRFIAYQETVEKRLTS



Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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