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Genome Displays Related Resources Gene HomoloGene MANE RefSeq
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Report for CCDS40781.2 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
40781.2 |
Public |
Mus musculus |
9 |
Setd2 |
23 |
108 |
98 |
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Public Note for CCDS 40781.2 |
The coding region has been updated to extend the N-terminus to one that is more supported by available conservation data. |
Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47
Review status: Reviewed (by RefSeq, Havana and CCDS collaboration) Sequence IDs included in CCDS 40781.2
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
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EBI |
ENSMUST00000153838.7 |
ENSMUSP00000116313.2 |
Accepted |
alive |
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NCBI |
NM_001081340.2 |
NP_001074809.2 |
Updated |
not alive |
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NCBI |
NM_001081340.3 |
NP_001074809.2 |
Accepted |
alive |
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RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_001074809.2 |
2537 |
E9Q5F9-1 |
2537 |
100% |
0 |
0 |
Chromosomal Locations for CCDS 40781.2
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (7614 nt): ATGAAGCCGCTGCCGTCGCAGCAGCCGCCACCGAAGATGGGGGATTTCTACGATCCCGAGCACCCGACCC CTGAAGAAGAAGAAAATGAGGCAAAGATTGAAAATGTGCAGAAAACAGGTTTCATCAAAGGACCAGTGTT CAAAGGTGTTGCTTCAAGTCGATTTTTGCCCAAAGGCACGAAGACAAAAGTTAATTTGGAGGAACAGGGA CGGCAAAAGGTGTCATTCAGCTTCAGTTTTACAAAGAAAACTTTACAGAATAGATTTCTCACTGCGCTTA GCAATGAAAAGCAAAGTGATTCTCCAAACTCCCCAGCTCCCCCTCTTCAAGTAGACTCAAACCCTAAAGT TAAAATGGACGCTGGAGATACTTTTCCTGCTACAGAAGAATCTTCGCCACCAAAATCGAGAGTGGAATTG GGCAGAATTCATTTTAAGAAACATTTGCTTCATGTGACATCTAGGCCACAGCTGGCTGCAAGTACAACAG CAGCATCTCCCCTTCCTCCTACAACACAGTTACCAGCAGTCTTAGCAGAGTCGATGATAGACTCACCACC TTCATCTCCACCCCCACCTCCTCCACCTCCCCAGGCCTCATCACCCTCACCACCAGCACAGATATCAGAG CCAGTGGCCTTGCCGCAACCCCCAGCAACAGCACTAATGACATCACCACCAGGACCTTTACCAGGAGACG TAGCCGTGAGAGCTCAGAAAGAATCACCAGTTAAAAGTGGACCCGAAGTTTTAGAGGTGGATACAAAGCA AGATATTGTATCTAATAGTTTGGAAGAACACACAGTTCAAACTTTGAAGGAACAAGCAGATCATCTCCTG CAAAAAGAAGATTCCCATATTGGGAAGGAAGAAGAGGTTTCAGATGGCTCTAAGATAAGCCTCAGTTCTA AAAAAGCAAGTTCTAAGAAGAAATCTTCACAATTTGAAGGCACATTTCTTGGTTCAGAGTCTGATGAAGA TTCTGTACGGACTTCTTCCAGTCAAAGATCACATGATTTAAAATCTTCAACAAGCATTGACAAGGAAAGA GATTTTAAGAAGAGCTCAGCACCTTCAAAAAGTGAGGATTTGGGGAAATCATCAAGATCGAAAACAGAGA GAGATGATAGATATTGTAGCTACTCAAAACTTGAACGAGATACTCGGTATGTATCTTCCCGATGTCGGTC CGAAAGAGATCGAAGGCGAAGCCGATCTCGTTCTAGATCTGACAGAGCCTCTAGAACTAGTTTGTCTTAT TCTCGCTCAGAAAGATCTCATTATTATGATTCTGAACGGCGCTACCATAGGAGTTCCCCTTATCGTGAGA GGACACGCTATTCTCGGCCATATACTGATAACAGGGCACGGGAGAGCTCAGACTCTGAAGATGAGTATAA GAAGACATACCCACGGCGTACCTCAGCCCATTCCTACAGAGACCTAAGGACATCATCATCTTACTCTAAA TTTGATCGGGACTGTAAAACTGAGACCTCTTACTTAGAGATGGAGAGAAGAGGAAAGTATACTTCAAAAC TAGAAAGAGAATCCAAACGGACTTCAGAGCATGAAACCATAAAAAGATGTTGTTCTCCCCCAAATGAACT GGGATTCCGACGGGGGTCATCATATTCCAAGCATGATAACAGTACTTCCCGTTATAAATCTGCCCTTTCA AAATCTATATCCAAGAATGATAAATTTAAAAATTCTTTCTGTTGTACAGAATTAAATGAGGAAAACAAAC AATCTCATTCGTTTAGTTTGCAGACTCCTTGTTCAAAAGGTAGTGAATTAAGAACAATTAATAAGATTTC TGAAAGAGAAAAGACTGGGTCTCCAACTCCATCAAATCAATTAAACGATTCACCTACTTTTAAAAAGCTA GATGAATCTCCTGTTCTTAAGCCTGAATTTATAGGACACGATGGCCGTGAAAGTATTAAAGAATTGGAGT TATCAAAAGTGAAAAATGATCAATTAAGAAATTTTTGTTCCATTGAATTAAATGTAAACGGATCTCCAGA GACAGAAGCTGATGTGGCAACATTTTGTACTTCTAAGACAGATGCTATATCAATGACTTCTGATGATAGT GTGACTGGATCAGAGGTATCCCCTTTGATCAAGGCTTGCATGCTTTCATCAAATGGATTTCAGAATGTTG GTAGATGCAGAGAAAGGGACTCAGATGATACTTGTAGGCAGCATAATACGTCAAAAAGTCCATTTAGGGA AATGGAACCTTTGTTGTCACCACACCATGATAAACTCATGTCTTTGCCAGTTAAGACTATAGATTATCCC AAAACATTAATTAAAGAACCAGTTGATAAGAGACATTCTTGCTGCAAAACCAAAGATTCAGATATATACT GTTCTCCAAATGAAAACCCTGAAGCTGAGAACGCTGAACCTTCAGCTATGACGATTTCTTCACATAGCTT TGTGAATGTGCATTTGGAATCCAAGACAGTTATATGTGATAATAGGGAGCCGACAGACCGGCACTCAGAG AATACATGTGATGAATATAAGCAGAGCATTGGTAGCACTAGTTCAGCTTCTCATAACCATTTTGATGGTT TGTATGAGCCTATAGGGAGTTCAGGTATTTCATCTCTCCAGAGTCCTCCGTCAGGAATAAGATGTGAAGA AAACACATCTCCAACTCTAGATGCAGTGGAGAGTAAAAAAGGCATAGATTTTTTAAAGTATGCACGGAAA GAAACAGATGTTGGTAGTGCCCTTCCTGATTCAGGAAAAGGATTTTCTTGGGAAAACAGGCATAATAATG TGTTATCTGGGCAGTCTTTGCAAGAGGCTCAAGAAGAAGGGAATTCCATATTGCATGAGAGAAGAGGAAG ACCAGAAATCCCCTTAGATGAGGAACAAAGAGGCCATACACATATTTCTGATGATTCAGAAGTGGTATTT CCTTATGATTTGAACTTGACCATGGAAGACAGTGATGGTATAACCTACACCTTAAAATGTGATAGTAGTG GAAATGCTCCAGAGATTGTATCTACTGTCCATGAAGACTATTCTGGATCTTCTGCAAGTTCAAGCGATGA AAGTGATTCTGAAGATACAGAGTCTGATGATAGCAGTATTCCAAGAAACCGACTCCAGTCTGTTGTGGTT GTGCCAAAGAATTCTACTTTGCCCATGGAAGAGACAAGTCCCTGTTCTTCTCGGAGCAGTCAGAGCTACA AACATTATTCTGACCGCTGGGAAGATGGATTAGAGACCAGGAGACATGCATATGAGGAAGAGTATGAGAG TAAAGGCTGTTCTCAAACTGAAAAATACTTCCTTCATAAAGGAACAGAGAGAAGTGCAGAAAGTTGTTAT TCACAGTTTGGCAGGAAAGCAGATAATCACCTGCCTGACATTGCTCATGCTCAGAGTGACGGGGTTGATA GTACAAGTCAGACAGACTCGAGATCTGACCATCTAGGTCACCTGAATCCAGAGGACACATTAAGAGCCAA AACATCTAGGCCACAAGAGCTACCAGTTTATTCTGACGATTTTGAAGATCTCCCAAATAAGTCTCGGCAG CAGATGATTTTCTCTAATCGGCCAGATAGTAGTAGACTAGGAAAAACAGAGCTGAGTTTTTCTTCCTCTT GTGACATTTCCCGAATGGATGGCTTGCACTCATCAGAAGAGCTCAGAAACCTAGGGTGGGACTTTTCCCA ACAGGAAAGGCCCACCACCACATACCAGCAGCCTGACAGCAGCTATGGAACCTGTGGTACACATAAGTAT CAACAAAGTACTGAACACTATGGTGGGACCCATAATTACTGGCAAGGCAATGGCTATTGGGATCCAAGAT CAGCAGGTAGACCTCCAGGAACTGGGCTTGCTTATGATCGAATCCAAGGGCAAGTACCAGATTCTCTAAC AGACGATCGTGAAGAAGAGGAACATTGGGATCAACGAAGTGGATCACATTTTTCAAGCCCGTCCAATAAA TTTTTCTTCCATCAGAAGGACAAGGGATCAGTGCAAGCACCGGAAATAAGCAGCAATTCAATTAAAGACG CTTTAGTTATGAACGAAAGGAAAGATTTTTCGAAAAACTTTGAAAAAAATGATATAAAAGAGAGAGGGCC TCCTAAAAAACGAAGGCAAGAGTTGGAGAGTGATTCTGAAAGTGATGGTGAACTACAGGCTAGAAAGAAA GTTAGAGTGGAGATGGAGCAGGGAGAATCATCTGTGCCCCAGCACTCAGAACTGATGGGGCCTTCGTGTG CTATGGATGACTTCAGGGACCCACAGCGGTGGAAAGAATTTGCCAAGCTGGGGAAGATGCCATGTTACTT TGATCTTATTGAAGAAAATGTTTATTTAACAGAAAGGAAGAAGAACAAATCCCACCGGGATATTAAGCGA ATGCAGTGTGAGTGTACACCTCTTTCTAAGGATGAAAGAGCTCAAGGTGAAGTAGCATGTGGAGAAGATT GCCTTAATCGTCTCCTCATGATTGAATGTTCCTCTCGATGTCCAAATGGAGATTACTGTTCAAACAGACG GTTTCAGAGAAAACAGCATGCAGATGTAGAAGTCATACTTACAGAAAAGAAAGGCTGGGGCTTAAGGGCT GCTAAGGATCTTCCTTCGAACACCTTTGTCCTGGAATACTGTGGAGAGGTACTTGATCATAAAGAGTTTA AAGCTCGGGTGAAAGAATATGCACGGAACAAAAACATCCACTACTACTTCATGGCCCTGAAAAATGACGA GATAATAGATGCCACTCAAAAAGGGAATTGCTCTCGTTTCATGAATCATAGCTGTGAACCAAACTGTGAA ACCCAGAAATGGACTGTGAATGGACAGCTGAGGGTTGGATTTTTTACCACCAAACTAGTTCCTTCAGGCT CAGAATTAACTTTTGACTACCAGTTCCAAAGATATGGCAAAGAAGCTCAGAAGTGTTTCTGTGGGTCAGC CAACTGCCGGGGCTACTTGGGAGGAGAAAACAGAGTCAGTATCAGAGCTGCAGGAGGGAAGATGAAAAAG GAACGCTCTCGAAAGAAGGATTCAGTGGATGGAGAACTTGAAGCACTGATGGAAAATGGTGAAGGCCTCT CTGATAAGAACCAGGTTCTTAGTTTATCCCGGCTCATGGTTAGAATTGAAACTTTGGAACAGAAACTTAC CTGTCTTAAGCTCATTCAGAACACACACTCACAGTCCTGCCTCAAGTCATTTCTGGAACGTCATGGGTTG TCACTGTTGTGGATCTGGATGGCAGAGCTTGGCGACGGCCGGGAAAGTAACCAGAAGCTTCAGGAAGAGA TTATAAAGACTTTGGAGCATTTGCCCATTCCTACTAAAAATATGTTGGAAGAAAGCAAAGTACTTCCAAT TATTCAGCGCTGGTCTCAAACTAAGACTGCTGTTCCTCAGTTAAGTGAAGGAGACGGGTATTCTAGTGAG AATACATCACGTGCTCACACACCGCTTAATACACCGGACCCTTCTGCCAAGCCGAGCACGGAAATGGATA CAGATACTCCCAAGAAACTCATATTCCGCAGACTGAAGATTATAAGTGAAAATAGCATGGACAGTGCAGT CTCGGACGTCACTAGTGAGCTAGAATGCAAGGATGGCAAAGAGGACCTTGATCAGTTAGAGACTGTCACT GTGGAAGAGGATGAAGAGCTGCAGTCCCAGCAGCTCCTCCCACAGCAGCTGTGCGAGTCCAAAGTTGAGA GTGAAGCCACTATTGAAGTCAGTAAGTTACCCACATCTGAACCGGAGGCAGACACGGAGACAGAGCCCAA AGACAGCAATGGCACAAAACTAGAAGAAACTATTGCTGAGGAAACACCATCCCAAGATGAAGAAGAGGGA GTGTCTGATGTTGAAAGTGAGAGAAGCCAGGAGCCACCAGATAAAACAGTGGATATAAGTGATTTGGCTA CCAAGTTACTAGACAGTTGGAAAGATCTAAAGGAGGTGTATCGGATTCCAAAGAAAAGTCAAACTGAAAA GGAGAGCACAGTAGCTGAACGAGGAAGAGATGCTGCTGCCTTCAGAGATCAAACAGCTCCAAAGACTCCT AACAGGTCTAGAGAGAGAGACCCAGACAAGCAGTCTCAAAATAAAGAGAAAAGGAAACGACGGGGCTCTC TGTCACCACCCTCTTCTGCATATGAGCGGGGAACAAAAAGGCCAGATGACAGATATGATACACCAACTTC TAAAAAGAAAGTACGAATTAAAGACCGAAACAAACTTTCTACAGAGGAGCGCAGGAAGTTGTTTGAACAA GAGGTGGCACAGAGGGAAGCTCAGAAGCAACAGCAACAGATGCAGAACTTGGGGATGACATCACCACTCC CCTTTGACTCTCTGGGATATAATGCCTCTCATCACCCCTTTGCTGGGTACCCACCAGGTTACCCCATGCA AGCCTATGTGGATCCCAGCAACCCTAATGCTGGAAAGGTGCTTCTGCCCACACCTAGCATGGACCCTGTG TGCTCCCCTGCTCCTTATGATCACGCTCAGCCCTTGGTAGGACATTCTACAGAATCCCTTGCTGCTCCCC CATCTGTGCCAGTGGTGCCGCATGTGGCAGCCTCTGTGGAAGTTTCCAGTTCTCAGTATGTAGCTCAGAA TGAAAGTGTTGTACACCAAGACTCCAATGTTCCTGTAATGCCAGTACAAGCTCCAGGCCCAGTCCAAGGA CAGAATTACAATGTCTGGGAGTCAAACCAACAGTCTGTCAGTGTACAACAGCAGTATTCTCCTGCACAAT CTCAAACAACCATATATTATCAAGGACAGACATGTTCAACTGTCTATAGTGTGACCTCGCCTTATTCACA GACAACTCCTCCAATTGTGCAGAGTTATGCCCAGCCAAGTCTTCAGTATATCCAGGGACAGCAGATTTTC ACAGCTCACCCACAAGGAGTGGTGGTACAGCCAACTGCAGCCGTGACTTCAATAGTTGCACCAGGGCAGC CTCAGTCCTTACAGCCACCTGAAATGGTTGTAACAAATAATCTACTGGACCTGCCACCACCCTCCCCTCC AAAACCAAAAACGATTGTTTTACCTCCCAACTGGAAGACAGCCCGAGACCCTGAGGGGAAGATCTACTAC TACCACGTGATCACAAGACAGACTCAGTGGGATCCTCCTACTTGGGAAAGCCCAGGAGATGATGCCAGCC TTGAGCATGAAGCTGAAATGGACCTGGGAACCCCAACCTATGATGAAAACCCCATGAAGACATCAAAAAA GCCCAAGACAGCAGAAGCAGACACCTCCAGTGAGCTGGCAAAGAAAAGCAAAGAAGTATTCAGAAAAGAG ATGTCTCAGTTCATTGTCCAGTGCCTGAATCCTTACCGGAAACCTGACTGCAAGGTGGGCAGGATCACCA CCACTGAAGATTTCAAGCACCTCGCCCGAAAGCTGACTCATGGAGTTATGAATAAGGAGCTGAAGTACTG TAAGAACCCCGAGGACCTGGAGTGCAATGAGAATGTGAAACACAAAACCAAGGAGTACATCAAGAAGTAC ATGCAGAAGTTTGGGGCTGTTTACAAACCTAAAGAGGACACTGAACTAGAGTGA
Translation (2537 aa): MKPLPSQQPPPKMGDFYDPEHPTPEEEENEAKIENVQKTGFIKGPVFKGVASSRFLPKGTKTKVNLEEQG RQKVSFSFSFTKKTLQNRFLTALSNEKQSDSPNSPAPPLQVDSNPKVKMDAGDTFPATEESSPPKSRVEL GRIHFKKHLLHVTSRPQLAASTTAASPLPPTTQLPAVLAESMIDSPPSSPPPPPPPPQASSPSPPAQISE PVALPQPPATALMTSPPGPLPGDVAVRAQKESPVKSGPEVLEVDTKQDIVSNSLEEHTVQTLKEQADHLL QKEDSHIGKEEEVSDGSKISLSSKKASSKKKSSQFEGTFLGSESDEDSVRTSSSQRSHDLKSSTSIDKER DFKKSSAPSKSEDLGKSSRSKTERDDRYCSYSKLERDTRYVSSRCRSERDRRRSRSRSRSDRASRTSLSY SRSERSHYYDSERRYHRSSPYRERTRYSRPYTDNRARESSDSEDEYKKTYPRRTSAHSYRDLRTSSSYSK FDRDCKTETSYLEMERRGKYTSKLERESKRTSEHETIKRCCSPPNELGFRRGSSYSKHDNSTSRYKSALS KSISKNDKFKNSFCCTELNEENKQSHSFSLQTPCSKGSELRTINKISEREKTGSPTPSNQLNDSPTFKKL DESPVLKPEFIGHDGRESIKELELSKVKNDQLRNFCSIELNVNGSPETEADVATFCTSKTDAISMTSDDS VTGSEVSPLIKACMLSSNGFQNVGRCRERDSDDTCRQHNTSKSPFREMEPLLSPHHDKLMSLPVKTIDYP KTLIKEPVDKRHSCCKTKDSDIYCSPNENPEAENAEPSAMTISSHSFVNVHLESKTVICDNREPTDRHSE NTCDEYKQSIGSTSSASHNHFDGLYEPIGSSGISSLQSPPSGIRCEENTSPTLDAVESKKGIDFLKYARK ETDVGSALPDSGKGFSWENRHNNVLSGQSLQEAQEEGNSILHERRGRPEIPLDEEQRGHTHISDDSEVVF PYDLNLTMEDSDGITYTLKCDSSGNAPEIVSTVHEDYSGSSASSSDESDSEDTESDDSSIPRNRLQSVVV VPKNSTLPMEETSPCSSRSSQSYKHYSDRWEDGLETRRHAYEEEYESKGCSQTEKYFLHKGTERSAESCY SQFGRKADNHLPDIAHAQSDGVDSTSQTDSRSDHLGHLNPEDTLRAKTSRPQELPVYSDDFEDLPNKSRQ QMIFSNRPDSSRLGKTELSFSSSCDISRMDGLHSSEELRNLGWDFSQQERPTTTYQQPDSSYGTCGTHKY QQSTEHYGGTHNYWQGNGYWDPRSAGRPPGTGLAYDRIQGQVPDSLTDDREEEEHWDQRSGSHFSSPSNK FFFHQKDKGSVQAPEISSNSIKDALVMNERKDFSKNFEKNDIKERGPPKKRRQELESDSESDGELQARKK VRVEMEQGESSVPQHSELMGPSCAMDDFRDPQRWKEFAKLGKMPCYFDLIEENVYLTERKKNKSHRDIKR MQCECTPLSKDERAQGEVACGEDCLNRLLMIECSSRCPNGDYCSNRRFQRKQHADVEVILTEKKGWGLRA AKDLPSNTFVLEYCGEVLDHKEFKARVKEYARNKNIHYYFMALKNDEIIDATQKGNCSRFMNHSCEPNCE TQKWTVNGQLRVGFFTTKLVPSGSELTFDYQFQRYGKEAQKCFCGSANCRGYLGGENRVSIRAAGGKMKK ERSRKKDSVDGELEALMENGEGLSDKNQVLSLSRLMVRIETLEQKLTCLKLIQNTHSQSCLKSFLERHGL SLLWIWMAELGDGRESNQKLQEEIIKTLEHLPIPTKNMLEESKVLPIIQRWSQTKTAVPQLSEGDGYSSE NTSRAHTPLNTPDPSAKPSTEMDTDTPKKLIFRRLKIISENSMDSAVSDVTSELECKDGKEDLDQLETVT VEEDEELQSQQLLPQQLCESKVESEATIEVSKLPTSEPEADTETEPKDSNGTKLEETIAEETPSQDEEEG VSDVESERSQEPPDKTVDISDLATKLLDSWKDLKEVYRIPKKSQTEKESTVAERGRDAAAFRDQTAPKTP NRSRERDPDKQSQNKEKRKRRGSLSPPSSAYERGTKRPDDRYDTPTSKKKVRIKDRNKLSTEERRKLFEQ EVAQREAQKQQQQMQNLGMTSPLPFDSLGYNASHHPFAGYPPGYPMQAYVDPSNPNAGKVLLPTPSMDPV CSPAPYDHAQPLVGHSTESLAAPPSVPVVPHVAASVEVSSSQYVAQNESVVHQDSNVPVMPVQAPGPVQG QNYNVWESNQQSVSVQQQYSPAQSQTTIYYQGQTCSTVYSVTSPYSQTTPPIVQSYAQPSLQYIQGQQIF TAHPQGVVVQPTAAVTSIVAPGQPQSLQPPEMVVTNNLLDLPPPSPPKPKTIVLPPNWKTARDPEGKIYY YHVITRQTQWDPPTWESPGDDASLEHEAEMDLGTPTYDENPMKTSKKPKTAEADTSSELAKKSKEVFRKE MSQFIVQCLNPYRKPDCKVGRITTTEDFKHLARKLTHGVMNKELKYCKNPEDLECNENVKHKTKEYIKKY MQKFGAVYKPKEDTELE
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