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Report for CCDS24274.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
24274.1 Public Mus musculus 10 Ankrd52 23 108 98 CCDS HistoryNCBI Gene:237615Re-query CCDS DB by CCDS ID:24274.1See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 24274.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000014642.9 ENSMUSP00000014642.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000014642.9Link to Ensembl Protein Viewer:ENSMUSP00000014642.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000014642Re-query CCDS DB by Protein ID:ENSMUSP00000014642
Original member Current member NCBI NM_172790.2 NP_766378.1 Accepted alive Link to Nucleotide Sequence:NM_172790.2Link to Protein Sequence:NP_766378.1Re-query CCDS DB by Nucleotide ID:NM_172790Re-query CCDS DB by Protein ID:NP_766378Link to BLAST:NP_766378.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_766378.1 1076 Q8BTI7 1076 100% 0 0

Chromosomal Locations for CCDS 24274.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 128377223 128377249 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128377569 128377652 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128378088 128378166 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128378353 128378423 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128379381 128379581 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128380581 128380668 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128380928 128381070 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128381846 128382058 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128382335 128382413 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128382632 128382746 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128382901 128382983 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128383060 128383177 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128383355 128383423 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128383569 128383709 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128383792 128383872 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128386101 128386212 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128386409 128386480 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128386959 128387160 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128387370 128387457 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128387587 128387704 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128388539 128388758 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128388901 128388988 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128389087 128389170 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128389248 128389393 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128389481 128389563 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128389770 128389852 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128390033 128390124 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 128390471 128390721 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3231 nt):
ATGGGGATCCTCAGCATCACGGACCAGCCGCCCCTGGTCCAGGCCATCTTTAGCCGAGATGTGGAGGAAG
TGCGTTCCCTCCTCTCGCAGAAGGAGAACATCAATGTACTGGACCAAGAGAGGCGAACCCCATTGCATGC
TGCTGCCTACGTAGGCGATGTCCCCATCCTCCAGTTGCTACTGATGTCAGGTGCTAACGTCAACGCTAAG
GACACACTGTGGCTGACCCCTCTTCATCGTGCCGCTGCCTCCCGAAACGAGAAGGTGCTGGGGCTGCTGT
TGGCACACTCAGCGGATGTGAATGCCCGGGACAAGCTGTGGCAGACACCACTGCATGTGGCTGCTGCCAA
CCGGGCCACCAAGTGTGCAGAGGCTCTGGCACCCCTGTTGAGCAGTCTCAATGTGGCTGACAGGAGCGGG
CGCAGCGCTCTACACCATGCAGTACACAGTGGGCATCTTGAGACAGTGAACCTGCTCCTGAATAAGGGAG
CCAGCCTGAATGTCTGCGATAAAAAGGAACGGCAGCCGCTGCACTGGGCAGCTTTTCTAGGGCATTTAGA
GGTCCTGAAACTGCTGGTGGCACGTGGAGCAGACCTCAGCTGTAAAGATCGAAAGGGCTACGGGCTGCTC
CACACAGCTGCAGCCAGTGGCCAGATTGAAGTGGTGAAGCACTTGCTTCGGATGGGGGCCGAGATCGATG
AGCCCAATGCTTTTGGAAACACAGCTTTGCACATCGCTTGCTACCTGGGCCAGGATGCTGTGGCTATCGA
GCTTGTGAACGCAGGAGCCAATGTGAACCAGCCGAATGACAAGGGCTTCACTCCACTGCATGTGGCGGCT
GTCTCTACCAACGGCGCTCTGTGTCTGGAACTGTTAGTTAATAATGGGGCTGACGTCAACTACCAGAGTA
AAGAAGGGAAAAGTCCCCTGCACATGGCTGCCATCCATGGGCGTTTCACGCGTTCCCAGATCCTCATCCA
GAATGGTAGCGAGATTGACTGTGCTGACAAGTTTGGAAACACGCCCCTACATGTGGCTGCTCGCTATGGA
CACGAGCTACTCATCAGCACTCTCATGACCAATGGCGCAGATACTGCCCGGCGCGGTATCCACGACATGT
TCCCCCTGCACTTAGCTGTTCTCTTTGGATTCTCTGACTGTTGCCGGAAGCTTCTCTCCTCAGGTCAGCT
GTATAGCATCGTGTCTTCGCTCAGCAACGAGCATGTGCTTTCCGCTGGGTTTGACATCAACACACCGGAC
AGCCTTGGCCGCACCTGTCTTCATGCTGCTGCTTCAGGAGGAAATGTTGAGTGTCTTAATTTGCTGTTGA
GCAGTGGAGCTGACCTGAGAAGGAGAGACAAATTTGGAAGGACCCCACTGCACTATGCAGCTGCTAATGG
TAGCTACCAGTGCGCAGTGACACTGGTGACAGCCGGGGCCGGTGTCAATGAGGCCGACTGTAAGGGCTGT
TCGCCACTTCACTATGCTGCTGCCTCTGACACCTACCGGAGAGCGGAACCCCACACTGCTTCCAGCCATG
ATGCTGAAGAGGATGAGCTACTGAAGGAGTCTCGTAGGAAGGAGGCCTTCTTCTGTCTGGAGTTCTTATT
GGATAATGGTGCAGACCCTTCCCTGCGGGACAGGCAGGGCTACACAGCCGTGCACTATGCAGCCGCCTAC
GGCAACAGACAGAACCTCGAACTGCTCTTAGAAATGTCCTTTAACTGCCTAGAGGATGTGGAGAGTACAG
TTCCAGTCAGCCCTTTGCACTTAGCTGCCTACAACGGTCACTGTGAAGCCCTGAAGACACTGGCTGAGAC
GCTGGTGAACCTGGATGTAAGGGACCACAAGGGCCGGACCGCGCTCTTTCTGGCCACTGAGCGAGGCTCC
ACTGAGTGTGTGGAGGTACTGACGGCCCATGGTGCCTCTGCCCTCATCAAGGAGCGAAAACGCAAGTGGA
CACCCTTACATGCTGCTGCTGCCTCTGGCCACACCGATTCCCTGCACTTGCTGATTGACAGTGGGGAGCG
AGCTGACATCACAGATGTCATGGATGCCTATGGACAAACCCCACTGATGCTGGCCATTATGAATGGCCAT
GTGGACTGTGTACATCTGCTGCTAGAGAAGGGATCCACGGCTGATGCTGCTGACCTCCGGGGCCGCACTG
CCCTCCACCGTGGGGCAGTGACTGGCTGTGAGGACTGCCTGGCTGCCCTGCTGGACCACGATGCATTTGT
ACTGTGCCGAGACTTTAAGGGCCGCACACCCATTCACCTGGCCTCAGCCTGTGGCCACACTGCAGTGCTG
CGGACTCTGCTGCAGGCTGCCCTTTCCACAGACCCCCTAGATGCTGGTGTCGATTACAGCGGATACTCGC
CCATGCACTGGGCCTCCTACACTGGACATGAAGATTGTCTGGAGTTGTTACTTGAACACAGCCCGTTCTC
ATACTTGGAGGGAAACCCCTTCACTCCTTTGCACTGTGCAGTAATTAATAACCAGGACAGCACCACAGAG
ATGCTGCTGGGGGCTCTGGGTGCCAAGATTGTGAACAGCCGAGACGCCAAAGGACGGACTCCCCTTCACG
CCGCTGCCTTCGCGGACAACGTCTCTGGGCTCCGGATGCTGTTGCAGCACCAAGCCGAAGTGAATGCCAC
CGACCACACTGGCCGCACTGCGCTCATGACGGCCGCTGAGAGTGGACAGACTGCTGCTGTGGAATTTCTG
CTGTACCGAGGGAAGGCAGACCTGACTGTGCTGGATGAGAACAAGAACACTGCCCTTCACTTGGCTTGTA
GCAAGGGCCATGAGAAATGTGCCCTCATGATCCTGGCAGAAACCCAAGACCTTGGCCTTATCAATGCTAC
CAACAGTGCACTGCAGATGCCTCTCCACATTGCTGCCCGCAACGGTCTGGCTTCTGTGGTGCAGGCCCTG
CTGAGTCGTGGGGCCACAGTGCTGGCTGTGGATGAAGAAGGTCACACCCCAGCACTGGCCTGCGCTCCTA
ACAAAGATGTGGCAGACTGCCTGGCCTTGATCCTTTCCACCATGAAGCCTTTCCCACCCAAGGACGCCGT
CAGTCCTTTCAGCTTCAGCCTGCTCAAGAACTGCGGCATCGCAGCTGCCAAGACGGTGGGTGGCTGTGGC
GCCCTGCCTCACGGGGCCTCTTGTCCCTACAGCCAGGAGCGGCACGGCGCCATTGGGTTAGATGGCTGCT
ACTCAGAGTAG

Translation (1076 aa):
MGILSITDQPPLVQAIFSRDVEEVRSLLSQKENINVLDQERRTPLHAAAYVGDVPILQLLLMSGANVNAK
DTLWLTPLHRAAASRNEKVLGLLLAHSADVNARDKLWQTPLHVAAANRATKCAEALAPLLSSLNVADRSG
RSALHHAVHSGHLETVNLLLNKGASLNVCDKKERQPLHWAAFLGHLEVLKLLVARGADLSCKDRKGYGLL
HTAAASGQIEVVKHLLRMGAEIDEPNAFGNTALHIACYLGQDAVAIELVNAGANVNQPNDKGFTPLHVAA
VSTNGALCLELLVNNGADVNYQSKEGKSPLHMAAIHGRFTRSQILIQNGSEIDCADKFGNTPLHVAARYG
HELLISTLMTNGADTARRGIHDMFPLHLAVLFGFSDCCRKLLSSGQLYSIVSSLSNEHVLSAGFDINTPD
SLGRTCLHAAASGGNVECLNLLLSSGADLRRRDKFGRTPLHYAAANGSYQCAVTLVTAGAGVNEADCKGC
SPLHYAAASDTYRRAEPHTASSHDAEEDELLKESRRKEAFFCLEFLLDNGADPSLRDRQGYTAVHYAAAY
GNRQNLELLLEMSFNCLEDVESTVPVSPLHLAAYNGHCEALKTLAETLVNLDVRDHKGRTALFLATERGS
TECVEVLTAHGASALIKERKRKWTPLHAAAASGHTDSLHLLIDSGERADITDVMDAYGQTPLMLAIMNGH
VDCVHLLLEKGSTADAADLRGRTALHRGAVTGCEDCLAALLDHDAFVLCRDFKGRTPIHLASACGHTAVL
RTLLQAALSTDPLDAGVDYSGYSPMHWASYTGHEDCLELLLEHSPFSYLEGNPFTPLHCAVINNQDSTTE
MLLGALGAKIVNSRDAKGRTPLHAAAFADNVSGLRMLLQHQAEVNATDHTGRTALMTAAESGQTAAVEFL
LYRGKADLTVLDENKNTALHLACSKGHEKCALMILAETQDLGLINATNSALQMPLHIAARNGLASVVQAL
LSRGATVLAVDEEGHTPALACAPNKDVADCLALILSTMKPFPPKDAVSPFSFSLLKNCGIAAAKTVGGCG
ALPHGASCPYSQERHGAIGLDGCYSE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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