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Report for CCDS26109.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
26109.1 |
Public |
Mus musculus |
12 |
Gpr68 |
23 |
108 |
98 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:238377](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:26109.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 12 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39
Review status: Reviewed (by RefSeq and Havana)
Attributes |
CDS uses downstream AUG |
Sequence IDs included in CCDS 26109.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENSMUST00000053668.9 |
ENSMUSP00000057510.3 |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENSMUST00000053668.9](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSMUSP00000057510.3](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENSMUST00000053668](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSMUSP00000057510](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENSMUST00000110065.7 |
ENSMUSP00000105692.1 |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENSMUST00000110065.7](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSMUSP00000105692.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENSMUST00000110065](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSMUSP00000105692](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENSMUST00000110066.7 |
ENSMUSP00000105693.1 |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENSMUST00000110066.7](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSMUSP00000105693.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENSMUST00000110066](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSMUSP00000105693](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001177673.1 |
NP_001171144.1 |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001177673.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001171144.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001177673](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001171144](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001171144.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
|
NCBI |
NM_001177674.1 |
NP_001171145.1 |
Updated |
not alive |
![Link to Nucleotide Sequence:NM_001177674.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001171145.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001177674](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001171145](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
|
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001177674.2 |
NP_001171145.1 |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001177674.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001171145.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001177674](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001171145](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001171145.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_175493.4 |
NP_780702.1 |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_175493.4](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_780702.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_175493](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_780702](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_780702.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 26109.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (1098 nt): ATGGGGAACATCACTACAGAAAACTCCTCACTATCTTGCCCCATCGACCACACCATCCACCAGACACTAG CCCCAGTGGTCTATGTGACCGTGCTGGTGGTGGGCTTCCCAGCCAACTGCCTGTCCCTCTACTTCGGGTA CTTGCAGATCAAGGCCCGGAATGAGCTGGGAGTGTACCTGTGTAACCTGACCATTGCAGACCTGTTCTAT ATCTGTTCACTTCCCTTCTGGCTGCAGTACGTGCTTCAGCACGACGACTGGTCCCATGGTGACCTATCCT GCCAGGTGTGTGGCATCCTCCTCTATGAGAACATTTACATCAGCGTGGGCTTCCTCTGCTGCATCTCCAT CGACCGCTACCTGGCTGTGGCCCACCCCTTCCGCTTCCACCAGTTCCGCACCCTGAAGGCAGCCGTGGGT GTCAGTGTGCTCATCTGGGCCAAGGAGCTGCTGACCAGCATCTACTTCCTCAATCACAAGGAGGTCATTG AGGACGAGGACCAGCACCGAGTCTGCTTTGAGCATTACCCTATCCAGGCCTGGCAGCGTAGCATCAACTA CTACCGCTTCCTGGTGGGCTTTCTCTTCCCCATCTGCCTGCTGCTGGCCTCCTACCAGGGCATCCTGCGG GCTGTGCGCCGCAGCCACGGCACACAGAAGAGCCGCAAGGACCAGATTCAGCGGCTGGTGCTCAGCACCG TGGTCATCTTCCTGGCTTGCTTTCTACCCTACCACGTGCTGCTGCTGGTACGCAGCCTCTGGGAGAGAAA CTGTGAGTTTGCCAAGAGCATCTTCAACGTCTATCACTTCTCCCTCCTCCTCACCAGCTTCAACTGTGTA GCTGACCCGGTGCTGTACTGCTTTGTCAGTGAGACCACTCACAGGGACCTAGCCCGCCTCCGAGGAGCCT GCCTAGCTGTCCTTACCTGCTCTAGGACAAGCAGGGCCAGGGAGGCCTACCCTCTGGGTGCCCCTGAGGC CTCTGGGAAAAGTGGGGCCCAGGGCGAGGAACCTGAATTGTTAACCAAGCTCCACTCAGCCTTCCAGACC CCTAGCTCACTGGGAGTGGGAGGGCCCTCCACAGTGGGGTTGGCCTAG
Translation (365 aa): MGNITTENSSLSCPIDHTIHQTLAPVVYVTVLVVGFPANCLSLYFGYLQIKARNELGVYLCNLTIADLFY ICSLPFWLQYVLQHDDWSHGDLSCQVCGILLYENIYISVGFLCCISIDRYLAVAHPFRFHQFRTLKAAVG VSVLIWAKELLTSIYFLNHKEVIEDEDQHRVCFEHYPIQAWQRSINYYRFLVGFLFPICLLLASYQGILR AVRRSHGTQKSRKDQIQRLVLSTVVIFLACFLPYHVLLLVRSLWERNCEFAKSIFNVYHFSLLLTSFNCV ADPVLYCFVSETTHRDLARLRGACLAVLTCSRTSRAREAYPLGAPEASGKSGAQGEEPELLTKLHSAFQT PSSLGVGGPSTVGLA
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