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Report for CCDS40419.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
40419.1 Public Mus musculus 8 Zfp791 23 108 98 CCDS HistoryNCBI Gene:244556Re-query CCDS DB by CCDS ID:40419.1See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 40419.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000098550.3 ENSMUSP00000096150.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000098550.3Link to Ensembl Protein Viewer:ENSMUSP00000096150.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000098550Re-query CCDS DB by Protein ID:ENSMUSP00000096150
Original member Current member EBI ENSMUST00000211109.1 ENSMUSP00000147335.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000211109.1Link to Ensembl Protein Viewer:ENSMUSP00000147335.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000211109Re-query CCDS DB by Protein ID:ENSMUSP00000147335
Original member Current member NCBI NM_001037745.2 NP_001032834.1 Accepted alive Link to Nucleotide Sequence:NM_001037745.2Link to Protein Sequence:NP_001032834.1Re-query CCDS DB by Nucleotide ID:NM_001037745Re-query CCDS DB by Protein ID:NP_001032834Link to BLAST:NP_001032834.1

Chromosomal Locations for CCDS 40419.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 85109647 85111042 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 85112210 85112270 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 85113507 85113633 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 85119635 85119637 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1587 nt):
ATGGATTCAGTGACCTTTGAGGACGTGTGTGTGACTTTCACTCAGGAAGAGTGGGATCTACTGCGTCCTG
TACAGAAGAAACTCTACAAAGATGTGATGTGGGAAACTGTGAGGAACCTGGCCTCTGTGGCGAGTGAATT
GGAAGACCAGGATGTTTCAAATCAGTACAGAATCCAAGAGGAAAATGTAAGAAGTTATGTGATACAAAGA
CTCTATGAAAGTAAAGAAGTTATTGAGCATGGAGAAAGCTTCAGCCAGATTCCAAACACTGGTGCGGCCA
AGATAACTTCTGGAGGAAAGCCGTATAGTTGTAGCGTGTGTGGAAAAGGCTTCATGCTTTGTTCATCCCT
CACTAGGCATGTCAGAGCTCACCCTGGCCATGAACTTGCTGGGTTTAAGTGTGGAGAGAAGCGATTTAAA
TGTAAGGAATGTAGGGCCACTTTCAGTTACCTCAAATCCTTTCAGAGACATGAAAGGACCCACGCTGGAG
AAAGCCCCTACAGGTGTAAACACTGCGGGAAGACCTTCATCTATTTCCAGCCCTTTCAAACACATGAACG
GACACACATTGGAGAGCAACTCTATCAGTGTAAGCATTGTGGTAAAGGGCTTAGTTCTCCAGGTTCTCTT
CGAATTCATCAAAGAATTCACACCGGGGAGAAGCCCTATGTGTGTGAGAAGTGTGGCAAAGCCTTCAGTT
GTCCCAGTTCCATCCAAATCCACGAAAGAACCCACACCGGGGAGAAGCCCTATAAATGTAAAGAATGCGG
GAAAGCCTTCATATCCCGCACAAGTGTCAAAACGCACATGGTGACACACAGCGGCGATGCAAACAAGCCT
CATAAATGCGAGCATTGCGGGAAGGCGTTCCTTCGGCCATGTTTTCTGCGAGTGCATACGCGGATTCACA
CTGGAGAGAAGCCGTATGTCTGCAAGCAGTGTGGTAAGGCCTTCAGATGTTCCACTTCGATGCAGATCCA
TAAAAGGACTCACACCGGGGAGAAACCCTACAAGTGTAAGGAGTGCGGTAAAGCTTTCAGTGCCCATTCG
GCGTTTCGAGTCCACAGGCGGGTGCACACTGGAGAGAAGCCTTATAAATGCCGAGACTGTGGGAAAGCCT
TCATCTGCCTCACGTACTGCCGCGCGCATGAGCGGAAACACAGCGGAGAGAAGTCCTACGAATGCGATCA
GTGCGGGAAAGCCTTCGTCTCTCTGGAAAACTTTCGACGACATGTCAAAACTCACGCTGAAGATACACCT
TATAAATGTAAGGAGTGTGGAAAAGCTTTCGTTTTCCTCAGCGCCCTTCAAGCGCATGAGAGGATCCACA
CTGGGGAGAAGCCTTACGAATGTGAACAATGTGGCAAAACCTTTAGATGTTCAAGCTATGTTCAGGTACA
CAGGAGAATCCACACCGGGGAGAAGCCCTATGAATGTAAGGAGTGTGGGAAAACCTTCATTTATTCTACG
AGCTTTCGAGGGCACATGAGAATGCACACGGGAGAGAAACCCTACAAATGTAAGGGGTGTGAGAAAGCCT
TCAGGCTCGGCAGTTCCCTTAAAAGACATGAGAGAACTCACAGCTGA

Translation (528 aa):
MDSVTFEDVCVTFTQEEWDLLRPVQKKLYKDVMWETVRNLASVASELEDQDVSNQYRIQEENVRSYVIQR
LYESKEVIEHGESFSQIPNTGAAKITSGGKPYSCSVCGKGFMLCSSLTRHVRAHPGHELAGFKCGEKRFK
CKECRATFSYLKSFQRHERTHAGESPYRCKHCGKTFIYFQPFQTHERTHIGEQLYQCKHCGKGLSSPGSL
RIHQRIHTGEKPYVCEKCGKAFSCPSSIQIHERTHTGEKPYKCKECGKAFISRTSVKTHMVTHSGDANKP
HKCEHCGKAFLRPCFLRVHTRIHTGEKPYVCKQCGKAFRCSTSMQIHKRTHTGEKPYKCKECGKAFSAHS
AFRVHRRVHTGEKPYKCRDCGKAFICLTYCRAHERKHSGEKSYECDQCGKAFVSLENFRRHVKTHAEDTP
YKCKECGKAFVFLSALQAHERIHTGEKPYECEQCGKTFRCSSYVQVHRRIHTGEKPYECKECGKTFIYST
SFRGHMRMHTGEKPYKCKGCEKAFRLGSSLKRHERTHS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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