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Report for CCDS37731.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
37731.1 Public Mus musculus 18 Cetn1 23 108 98 CCDS HistoryNCBI Gene:26369Re-query CCDS DB by CCDS ID:37731.1See the combined annotation on chromosome 18 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 37731.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000062769.6 ENSMUSP00000057392.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000062769.6Link to Ensembl Protein Viewer:ENSMUSP00000057392.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000062769Re-query CCDS DB by Protein ID:ENSMUSP00000057392
Original member Current member EBI ENSMUST00000234590.1 ENSMUSP00000157126.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000234590.1Link to Ensembl Protein Viewer:ENSMUSP00000157126.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000234590Re-query CCDS DB by Protein ID:ENSMUSP00000157126
Original member Current member EBI ENSMUST00000234003.1 ENSMUSP00000157153.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000234003.1Link to Ensembl Protein Viewer:ENSMUSP00000157153.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000234003Re-query CCDS DB by Protein ID:ENSMUSP00000157153
Original member Current member NCBI NM_007593.5 NP_031619.3 Accepted alive Link to Nucleotide Sequence:NM_007593.5Link to Protein Sequence:NP_031619.3Re-query CCDS DB by Nucleotide ID:NM_007593Re-query CCDS DB by Protein ID:NP_031619Link to BLAST:NP_031619.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_031619.3 172 P41209 172 100% 0 0

Chromosomal Locations for CCDS 37731.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 18 (NC_000084.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18See the combined annotation on chromosome 18 in Sequence Viewer

Chromosome Start Stop Links
18 9618901 9619419 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (519 nt):
ATGGCGTCCACCTTCAGGAAGTCAAACGTTGCCTCTACCAGCTACAAGAGAAAGGTGGGTCCTAAGCCTG
AACTCACCGAAGATCAAAAGCAAGAAGTTCGGGAAGCCTTTGACCTCTTCGATTCTGATGGGAGCGGGAC
CATCGATGTGAAGGAGCTGAAGGTGGCCATGAGAGCACTTGGCTTTGAACCCAGGAAGGAAGAGATGAAG
AAAATGATTTCAGAAGTAGACAAAGAGGCCACAGGAAAGATCAGCTTCAATGACTTCTTGGCTGTGATGA
CTCAGAAGATGGCCGAGAAAGATACCAAAGAGGAAATCCTGAAGGCTTTCAGGTTGTTTGATGACGACGA
AACTGGGAAAATTTCATTCAAAAACCTCAAGCGTGTGGCCAATGAGCTGGGGGAAAGCCTCACAGACGAG
GAGCTGCAGGAAATGATTGATGAAGCTGATCGTGATGGCGACGGAGAAGTGAACGAGGAAGAGTTTCTTA
AGATCATGAAAAAGACCAACCTTTATTAA

Translation (172 aa):
MASTFRKSNVASTSYKRKVGPKPELTEDQKQEVREAFDLFDSDGSGTIDVKELKVAMRALGFEPRKEEMK
KMISEVDKEATGKISFNDFLAVMTQKMAEKDTKEEILKAFRLFDDDETGKISFKNLKRVANELGESLTDE
ELQEMIDEADRDGDGEVNEEEFLKIMKKTNLY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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