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Report for CCDS19759.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
19759.1 Public Mus musculus 5 Plod3 23 108 98 CCDS HistoryNCBI Gene:26433Re-query CCDS DB by CCDS ID:19759.1See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 19759.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000004968.10 ENSMUSP00000004968.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000004968.10Link to Ensembl Protein Viewer:ENSMUSP00000004968.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000004968Re-query CCDS DB by Protein ID:ENSMUSP00000004968
Original member Current member NCBI NM_011962.3 NP_036092.1 Accepted alive Link to Nucleotide Sequence:NM_011962.3Link to Protein Sequence:NP_036092.1Re-query CCDS DB by Nucleotide ID:NM_011962Re-query CCDS DB by Protein ID:NP_036092Link to BLAST:NP_036092.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_036092.1 741 Q9R0E1 741 100% 0 0

Chromosomal Locations for CCDS 19759.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 5 (NC_000071.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 136987686 136987803 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 136988117 136988208 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 136988335 136988471 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 136988572 136988735 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 136988883 136988995 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 136989126 136989189 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 136989598 136989695 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 136989897 136989998 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 136990151 136990276 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 136990418 136990539 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 136990745 136990849 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 136990959 136991084 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 136991300 136991441 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 136991544 136991657 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 136991772 136991840 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 136993209 136993313 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 136994143 136994289 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 136994933 136995058 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 136996106 136996261 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2226 nt):
ATGGCTGCGGCAGGCCCGGAACCCCGGCTTTTGCTCCTGCTCCTGCTGCTGCTGCCGCCGCTGCCCCCCG
TAACTTCTGCCTCCGATCGACCCCGGGGCGCCAATGCTGTCAACCCAGACAAATTGCTGGTGATCACTGT
GGCTACGGCAGAGACAGAGGGGTACCGGCGTTTTCTGCAGTCTGCGGAGTTCTTTAACTACACTGTACGG
ACCCTGGGCCTGGGACAGGAGTGGCGAGGGGGTGATGTGGCTCGAACAGTTGGTGGAGGCCAGAAGGTCA
GGTGGCTCAAGAAGGAAATGGAGAAATATGCAGATCAGAAAGACATGATCATCATGTTTGTGGACAGCTA
CGACGTGATTCTGGCAAGCAGCCCGACAGAGCTGCTGAAGAAGTTTGTTCAGAGTGGCAGTCATCTGCTG
TTCTCTGCTGAGAGCTTCTGCTGGCCTGAGTGGGGGCTGGCAGAGCAGTACCCTGAGGTGGGCATGGGGA
AGCGCTTCCTCAACTCTGGTGGATTCATCGGCTTTGCTCCCACCATCCATCAGATTGTCCGCCAGTGGAA
CTACAAAGACGACGATGATGATCAATTGTTCTACACTCAACTGTACCTGGACCCAGGGCTGCGGGAGAAA
CTCAAACTGAGTCTGGACCATAAATCCCGGATCTTTCAGAACCTCAATGGAGCCTTAGATGAAGTGATCT
TAAAGTTTGACCAGAATCGTGTGCGCATCCGGAATGTGGCCTACGACACACTTCCTGTTGTGGTCCATGG
AAATGGTCCCACTAAGCTCCAGCTCAACTACCTGGGGAACTATGTCCCCAATGGCTGGACTCCCCAGGGA
GGCTGTGGATTCTGCAACCAGACCCTGAGGACACTCCCGGGGGGGCAGCCTCCCCCCCGGGTGCTTCTGG
CCGTGTTTGTGGAGCAGCCTACTCCCTTCCTGCCTCGGTTCCTGCAGCGCCTACTGCTCCTGGATTACCC
CCCGGACAGGATCTCTCTCTTCCTTCACAACAGCGAGGTGTACCACGAGCCTCATATTGCAGATGCCTGG
CCACAGCTCCAGGACCATTTTTCAGCTGTAAAGCTGGTGGGGCCAGAGGAGGCCCTGAGCGCAGGGGAGG
CCAGGGACATGGCCATGGACAGCTGTCGGCAGAACCCTGAGTGTGAGTTCTACTTTAGCCTGGATGCTGA
TGCCGTCCTTACGAACCCGGAGACCTTGCGTGTCTTGATTGAACAAAACAGGAAGGTAATAGCTCCCATG
CTTTCCCGCCATGGCAAGCTCTGGTCCAACTTCTGGGGTGCCCTGAGCCCCAATGAGTACTACGCCCGCT
CCGAAGACTACGTGGAACTGGTGCAGCGGAAGCGAGTGGGCGTGTGGAATGTACCCTACATATCTCAGGC
ATATGTGATCCGCGGGGAGACCCTGAGGACTGAACTGCCCCAAAAGGAGGTATTCTCCAGCAGCGACACA
GACCCAGATATGGCTTTCTGCAAGAGCGTCCGGGACAAGGGCATCTTCCTCCACCTCAGCAACCAGCACG
AGTTTGGCCGGCTGCTGGCTACTTCTCGCTATGACACAGACCACCTACACCCAGACCTCTGGCAGATCTT
TGACAACCCTGTGGACTGGAGAGAACAGTACATTCACGAGAATTACAGCCGGGCCCTGGATGGGGAAGGG
CTAGTGGAACAGCCATGCCCAGATGTGTACTGGTTCCCACTGCTGACCGAGCAGATGTGTGATGAGCTGG
TGGAGGAAATGGAACACTATGGCCAGTGGTCTGGAGGCCGGCACGAGGATTCCAGGTTGGCTGGAGGATA
CGAGAATGTTCCCACCGTTGATATCCACATGAAACAGGTGGGATACGAGGACCAGTGGCTTCAGCTGCTG
CGGACATATGTGGGGCCCATGACGGAGTACCTGTTCCCTGGCTACCACACCAAGACACGGGCAGTGATGA
ACTTCGTGGTCCGCTACCGGCCAGATGAGCAGCCCTCGCTTCGGCCACACCATGACTCGTCCACCTTCAC
TCTCAATGTCGCCCTCAACCACAAGGGTGTAGATTATGAGGGAGGCGGCTGCCGCTTCCTGCGTTACGAC
TGCAGAATCTCCTCTCCGAGGAAAGGCTGGGCCCTCCTGCACCCTGGCCGCCTCACACACTACCATGAGG
GGCTGCCCACCACCCGGGGTACTCGATACATCATGGTGTCCTTTGTTGACCCCTGA

Translation (741 aa):
MAAAGPEPRLLLLLLLLLPPLPPVTSASDRPRGANAVNPDKLLVITVATAETEGYRRFLQSAEFFNYTVR
TLGLGQEWRGGDVARTVGGGQKVRWLKKEMEKYADQKDMIIMFVDSYDVILASSPTELLKKFVQSGSHLL
FSAESFCWPEWGLAEQYPEVGMGKRFLNSGGFIGFAPTIHQIVRQWNYKDDDDDQLFYTQLYLDPGLREK
LKLSLDHKSRIFQNLNGALDEVILKFDQNRVRIRNVAYDTLPVVVHGNGPTKLQLNYLGNYVPNGWTPQG
GCGFCNQTLRTLPGGQPPPRVLLAVFVEQPTPFLPRFLQRLLLLDYPPDRISLFLHNSEVYHEPHIADAW
PQLQDHFSAVKLVGPEEALSAGEARDMAMDSCRQNPECEFYFSLDADAVLTNPETLRVLIEQNRKVIAPM
LSRHGKLWSNFWGALSPNEYYARSEDYVELVQRKRVGVWNVPYISQAYVIRGETLRTELPQKEVFSSSDT
DPDMAFCKSVRDKGIFLHLSNQHEFGRLLATSRYDTDHLHPDLWQIFDNPVDWREQYIHENYSRALDGEG
LVEQPCPDVYWFPLLTEQMCDELVEEMEHYGQWSGGRHEDSRLAGGYENVPTVDIHMKQVGYEDQWLQLL
RTYVGPMTEYLFPGYHTKTRAVMNFVVRYRPDEQPSLRPHHDSSTFTLNVALNHKGVDYEGGGCRFLRYD
CRISSPRKGWALLHPGRLTHYHEGLPTTRGTRYIMVSFVDP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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