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Report for CCDS17013.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
17013.1 Public Mus musculus 2 Serinc3 23 108 98 CCDS HistoryNCBI Gene:26943Re-query CCDS DB by CCDS ID:17013.1See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 17013.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000017851.3 ENSMUSP00000017851.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000017851.3Link to Ensembl Protein Viewer:ENSMUSP00000017851.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000017851Re-query CCDS DB by Protein ID:ENSMUSP00000017851
Original member NCBI NM_012032.4 NP_036162.3 Updated not alive Link to Nucleotide Sequence:NM_012032.4Link to Protein Sequence:NP_036162.3Re-query CCDS DB by Nucleotide ID:NM_012032Re-query CCDS DB by Protein ID:NP_036162
Current member NCBI NM_012032.5 NP_036162.3 Accepted alive Link to Nucleotide Sequence:NM_012032.5Link to Protein Sequence:NP_036162.3Re-query CCDS DB by Nucleotide ID:NM_012032Re-query CCDS DB by Protein ID:NP_036162Link to BLAST:NP_036162.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_036162.3 472 Q9QZI9 472 100% 0 0

Chromosomal Locations for CCDS 17013.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 163625441 163625579 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 163626253 163626477 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 163627872 163628052 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 163629127 163629217 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 163630926 163631095 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 163632106 163632243 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 163634435 163634514 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 163636811 163637004 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 163639166 163639327 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 163644998 163645036 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1419 nt):
ATGGGGGCCGTCCTCGGCGTCTTCTCCCTCGCCAGCTGGGTCCCGTGCCTCTGTAGTGGTGCATCATGTC
TGCTGTGCAGTTGCTGTCCCATCAGTAAGAATTCCACTGTAACTCGGCTCATCTACGCTTTTATCCTCTT
CCTTGGCACTATTGTGTCTTGCATCATGATGACAGAAGGCATACAAACTCAACTGAAGAAGATTCCTGGA
TTCTGTGAAGGAGGATTTCAAATCAAGATGGTTGATACAAAGGCAGAGAAAGATTGTGACGTGCTGGTCG
GTTTTAAAGCTGTGTATCGGATCAACTTTGCTGTGGCCATCTTTTTCTTTGCCTTCTTTTTGCTCATGTT
AAAAGTTAAAACAAGTAAAGATCCCAGAGCAGCAGTGCACAACGGGTTTTGGTTCTTCAAAATCGCTGCC
ATTATTGGTATCATGATTGGATCTTTCTACATCCCTGGGGGCAGTTTTACTGAAGTCTGGTTTGTTGCTG
GAATGTTGGGGGCCTCTTTCTTCATTATCATCCAGCTGGTGCTCTTGGTAGACATGGCTCACTCTTGGAA
TGAATTATGGGTAAATCGAATGGAGGAAGGAAACCCAAGGCTCTGGTATGCTGCCTTGCTGTCCTTTACA
AGCCTCTTTTACATCCTCTCCATCGTCTTTGCTGCGCTGCTCTACGTCTTCTACACCAAGCCTGACGACT
GCACAGAAAACAAGGTCTTCATCAGCCTCAACCTGATTTTTTGTGTTGCAGTTTCTATTGTGTCCATCCT
CCCTAAAGTTCAGGAACATCAGCCTCGCTCTGGCCTCCTGCAGTCCTCCATCATCACTCTGTACACCCTT
TACCTCACGTGGTCAGCCATGACCAATGAACCTGAGCGGTCCTGCAATCCCTCCCTTATGAGCATCATCA
CACACTTAACTTCACCAACTGTGTCTCCTGCAAATTCAACTACTCTTGCTCCTGCCTATGCTCCGCCGTC
ACAGAGTGGGCACTTTATGAATTTGGATGATATTTGGGGACTGATTATCTTTGTTTTCTGCCTTATATAT
TCTAGCTTCCGTACTTCGAGCAACAGCCAAGTTAACAAGCTGACCCTCTCTGGGAGTGACAGTGTTATCC
TTGGTGATACCACCAATGGAGCCAATGATGAAGAGGATGGACAGCCACGGAGGGCTGTAGACAATGAGAA
GGAGGGGGTGCAGTATAGCTACTCCTTTTTCCACTTGATGCTCTGCTGTGCCTCCTTGTACATCATGATG
ACCATAACCAGCTGGTACAGCCCTGATGCCAAATTCCAGAAGGTATCCAGCAAGTGGCTAGCTGTGTGGT
TCAAAATGGGCTCCAGCTGGTTGTGCCTCCTCCTTTACCTCTGGACTCTTGTGGCTCCCCTGGTCCTCAC
AGGTCGGGACTTCAGCTGA

Translation (472 aa):
MGAVLGVFSLASWVPCLCSGASCLLCSCCPISKNSTVTRLIYAFILFLGTIVSCIMMTEGIQTQLKKIPG
FCEGGFQIKMVDTKAEKDCDVLVGFKAVYRINFAVAIFFFAFFLLMLKVKTSKDPRAAVHNGFWFFKIAA
IIGIMIGSFYIPGGSFTEVWFVAGMLGASFFIIIQLVLLVDMAHSWNELWVNRMEEGNPRLWYAALLSFT
SLFYILSIVFAALLYVFYTKPDDCTENKVFISLNLIFCVAVSIVSILPKVQEHQPRSGLLQSSIITLYTL
YLTWSAMTNEPERSCNPSLMSIITHLTSPTVSPANSTTLAPAYAPPSQSGHFMNLDDIWGLIIFVFCLIY
SSFRTSSNSQVNKLTLSGSDSVILGDTTNGANDEEDGQPRRAVDNEKEGVQYSYSFFHLMLCCASLYIMM
TITSWYSPDAKFQKVSSKWLAVWFKMGSSWLCLLLYLWTLVAPLVLTGRDFS


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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