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Report for CCDS3150.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
3150.1 Public Homo sapiens 3 SERP1 24 110 108 CCDS HistoryNCBI Gene:27230Re-query CCDS DB by CCDS ID:3150.1See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 3150.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000239944.7 ENSP00000239944.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000239944.7Link to Ensembl Protein Viewer:ENSP00000239944.2Re-query CCDS DB by Nucleotide ID:ENST00000239944Re-query CCDS DB by Protein ID:ENSP00000239944
Original member Current member EBI ENST00000479209.1 ENSP00000420076.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000479209.1Link to Ensembl Protein Viewer:ENSP00000420076.1Re-query CCDS DB by Nucleotide ID:ENST00000479209Re-query CCDS DB by Protein ID:ENSP00000420076
Original member Current member NCBI NM_014445.4 NP_055260.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_014445.4Link to Protein Sequence:NP_055260.1Re-query CCDS DB by Nucleotide ID:NM_014445Re-query CCDS DB by Protein ID:NP_055260Link to BLAST:NP_055260.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_055260.1 66 Q9Y6X1 66 100% 0 0

Chromosomal Locations for CCDS 3150.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 150544458 150544498 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 150545703 150545778 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 150546052 150546135 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (201 nt):
ATGGTCGCCAAGCAAAGGATCCGTATGGCCAACGAGAAGCACAGCAAGAACATCACCCAGCGCGGCAACG
TCGCCAAGACCTCGAGAAATGCCCCCGAAGAGAAGGCGTCTGTAGGACCCTGGTTATTGGCTCTCTTCAT
TTTTGTTGTCTGTGGTTCTGCAATTTTCCAGATTATTCAAAGTATCAGGATGGGCATGTGA

Translation (66 aa):
MVAKQRIRMANEKHSKNITQRGNVAKTSRNAPEEKASVGPWLLALFIFVVCGSAIFQIIQSIRMGM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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