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Report for CCDS9718.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9718.1 Public Homo sapiens 14 GMFB 24 110 108 CCDS HistoryNCBI Gene:2764Re-query CCDS DB by CCDS ID:9718.1See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9718.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000358056.8 ENSP00000350757.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000358056.8Link to Ensembl Protein Viewer:ENSP00000350757.3Re-query CCDS DB by Nucleotide ID:ENST00000358056Re-query CCDS DB by Protein ID:ENSP00000350757
Original member Current member NCBI NM_004124.3 NP_004115.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_004124.3Link to Protein Sequence:NP_004115.1Re-query CCDS DB by Nucleotide ID:NM_004124Re-query CCDS DB by Protein ID:NP_004115Link to BLAST:NP_004115.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_004115.1 142 P60983 142 100% 0 0

Chromosomal Locations for CCDS 9718.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 54478088 54478159 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 54479786 54479859 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 54480874 54480956 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 54481409 54481458 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 54482153 54482202 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 54483671 54483767 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 54488925 54488927 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (429 nt):
ATGAGTGAGTCTTTGGTTGTTTGTGATGTTGCCGAAGATTTAGTGGAAAAGCTGAGAAAGTTTCGTTTTC
GCAAAGAAACGAACAACGCTGCTATTATAATGAAGATTGACAAGGATAAACGCCTGGTGGTACTGGATGA
GGAGCTTGAGGGCATTTCACCAGATGAACTTAAAGATGAACTACCTGAACGACAACCTCGCTTCATTGTG
TATAGTTATAAATATCAACATGATGATGGAAGAGTTTCATATCCTCTGTGCTTTATTTTCTCCAGTCCTG
TTGGATGTAAGCCTGAACAACAGATGATGTATGCTGGAAGTAAGAATAAGCTAGTCCAGACAGCTGAACT
AACCAAGGTATTTGAAATAAGAAATACCGAAGACCTAACTGAAGAATGGTTACGTGAGAAACTTGGATTT
TTTCACTAA

Translation (142 aa):
MSESLVVCDVAEDLVEKLRKFRFRKETNNAAIIMKIDKDKRLVVLDEELEGISPDELKDELPERQPRFIV
YSYKYQHDDGRVSYPLCFIFSSPVGCKPEQQMMYAGSKNKLVQTAELTKVFEIRNTEDLTEEWLREKLGF
FH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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