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Report for CCDS30360.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
30360.1 Public Mus musculus X 2010106E10Rik 23 108 98 CCDS HistoryNCBI Gene:67715Re-query CCDS DB by CCDS ID:30360.1Re-query CCDS DB by GeneID:67715See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 30360.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000026602.8 ENSMUSP00000026602.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000026602.8Link to Ensembl Protein Viewer:ENSMUSP00000026602.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000026602Re-query CCDS DB by Protein ID:ENSMUSP00000026602
Original member Current member NCBI NM_026333.4 NP_080609.2 Accepted alive Link to Nucleotide Sequence:NM_026333.4Link to Protein Sequence:NP_080609.2Re-query CCDS DB by Nucleotide ID:NM_026333Re-query CCDS DB by Protein ID:NP_080609Link to BLAST:NP_080609.2

Chromosomal Locations for CCDS 30360.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome X (NC_000086.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 112495347 112495419 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 112497873 112497978 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 112512392 112512583 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 112515189 112515282 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 112556250 112556332 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 112556969 112557107 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 112557847 112557969 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (810 nt):
ATGGCAGATTGCACATTTATGCTGACTCAAATGCTGTTCATCTCCTGGTTTTTGATGGCACATTGCTCAC
AACCCAACTGTACATCTGTGAAAGACTTTAACAATTGTCTAGGAAACACAACAGGTTTCTGCCCAGAGTC
TATTGTTTGTGCATGCAAGGATGGCAAGCCTTTCTGCAAATGTCCAAATTTCAGAGGCCAATGGGGAGAC
TACTGGTACATGGGGGAGAAATGTGATCAACTCTGGAACACTCTGGACCTGGTTTTAGTAGCAACATTGC
CTGGAATAGCACTGGCCATAATCGTTGGTGTGGCAATCCAGATTATCCATTACTGTAAAGGGAAGTCAAA
GAAGAATGGAAATCATCACAGAGTGGAGAAGAGTATGTCAGAACTTCGACCTCAACATAATTCTGCATAT
GGTTTGGGTACTGATAGGAATCTTCCTCAACCTAATCAAAGAGAGAATCCATGGAGCTTATCAAACCCAG
AAGCTTTTTCTAGAACTTCTTTTTCTCCATCATCACAATTATCCAGAACAAATTCCAACTTTATTGCTCA
AGAACACAAAGAAGACCATCCTTACAACTATCCATATCTTAAGTGGAATGCCTCTCCAGGACCAAGTAAT
CCCGCAGTAAACTATGGAAACAGTCATTTGTCAGCCACATATGCAAAGCCAAACTTTGATTTTTCCACAT
CCGGGGTCCCACGAGCAGCATATCCTCCAAAAGAAAAGAAATACTCGGTTTATGAAGAGTCAGAAATCAC
TTACAAAATTGGTCGTGCAAACATGATACCCAACTATTAA

Translation (269 aa):
MADCTFMLTQMLFISWFLMAHCSQPNCTSVKDFNNCLGNTTGFCPESIVCACKDGKPFCKCPNFRGQWGD
YWYMGEKCDQLWNTLDLVLVATLPGIALAIIVGVAIQIIHYCKGKSKKNGNHHRVEKSMSELRPQHNSAY
GLGTDRNLPQPNQRENPWSLSNPEAFSRTSFSPSSQLSRTNSNFIAQEHKEDHPYNYPYLKWNASPGPSN
PAVNYGNSHLSATYAKPNFDFSTSGVPRAAYPPKEKKYSVYEESEITYKIGRANMIPNY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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