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Report for CCDS4536.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
4536.1 Public Homo sapiens 6 MYLIP 24 110 108 CCDS HistoryNCBI Gene:29116Re-query CCDS DB by CCDS ID:4536.1See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 4536.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000356840.8 ENSP00000349298.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000356840.8Link to Ensembl Protein Viewer:ENSP00000349298.3Re-query CCDS DB by Nucleotide ID:ENST00000356840Re-query CCDS DB by Protein ID:ENSP00000349298
Original member Current member NCBI NM_013262.4 NP_037394.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_013262.4Link to Protein Sequence:NP_037394.2Re-query CCDS DB by Nucleotide ID:NM_013262Re-query CCDS DB by Protein ID:NP_037394Link to BLAST:NP_037394.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_037394.2 445 Q8WY64-1 445 100% 0 0

Chromosomal Locations for CCDS 4536.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 16129323 16129409 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 16130557 16130747 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 16141625 16141810 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 16143020 16143217 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 16143699 16143863 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 16144897 16145317 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 16146662 16146751 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1338 nt):
ATGCTGTGTTATGTGACGAGGCCGGACGCGGTGCTGATGGAGGTGGAGGTGGAGGCGAAAGCCAACGGCG
AGGACTGCCTCAACCAGGTGTGCAGGCGACTGGGAATCATAGAAGTTGACTATTTTGGACTGCAGTTTAC
GGGTAGCAAAGGTGAAAGTTTATGGCTAAACCTGAGAAACCGGATCTCCCAGCAGATGGATGGGCTAGCC
CCTTACAGGCTTAAACTTAGAGTCAAGTTCTTCGTGGAGCCTCATCTCATCTTACAGGAGCAGACTAGGC
ATATCTTTTTCTTGCACATCAAGGAGGCCCTCTTGGCAGGCCACCTCTTGTGTTCCCCAGAGCAGGCAGT
GGAACTCAGTGCCCTCCTGGCCCAGACCAAGTTTGGAGACTACAACCAGAACACTGCCAAGTATAACTAT
GAGGAGCTCTGTGCCAAGGAGCTCTCCTCTGCCACCTTGAACAGCATTGTTGCAAAACATAAGGAGTTGG
AGGGGACCAGCCAGGCTTCAGCTGAATACCAAGTTTTGCAGATTGTGTCGGCAATGGAAAACTATGGCAT
AGAATGGCATTCTGTGCGGGATAGCGAAGGGCAGAAACTGCTCATTGGGGTTGGACCTGAAGGAATCTCA
ATTTGTAAAGATGACTTTAGCCCAATTAATAGGATAGCTTATCCTGTGGTGCAGATGGCCACCCAGTCAG
GAAAGAATGTATATTTGACGGTCACCAAGGAATCTGGGAACAGCATCGTGCTCTTGTTTAAAATGATCAG
CACCAGGGCGGCCAGCGGGCTCTACCGAGCGATAACAGAGACGCACGCATTCTACAGGTGTGACACAGTG
ACCAGCGCCGTGATGATGCAGTATAGCCGTGACTTGAAGGGCCACTTGGCATCTCTGTTTCTGAATGAAA
ACATTAACCTTGGCAAGAAATATGTCTTTGATATTAAAAGAACATCAAAGGAGGTGTATGACCATGCCAG
GAGGGCTCTGTACAATGCTGGCGTTGTGGACCTCGTTTCAAGAAACAACCAGAGCCCTTCACACTCGCCT
CTGAAGTCCTCAGAAAGCAGCATGAACTGCAGCAGCTGCGAGGGCCTCAGCTGCCAGCAGACCCGGGTGC
TGCAGGAGAAGCTACGCAAGCTGAAGGAAGCCATGCTGTGCATGGTGTGCTGCGAGGAGGAGATCAACTC
CACCTTCTGTCCCTGTGGCCACACTGTGTGCTGTGAGAGCTGCGCCGCCCAGCTACAGTCATGTCCCGTC
TGCAGGTCGCGTGTGGAGCATGTCCAGCACGTCTATCTGCCAACGCACACCAGTCTTCTCAATCTGACTG
TAATCTAA

Translation (445 aa):
MLCYVTRPDAVLMEVEVEAKANGEDCLNQVCRRLGIIEVDYFGLQFTGSKGESLWLNLRNRISQQMDGLA
PYRLKLRVKFFVEPHLILQEQTRHIFFLHIKEALLAGHLLCSPEQAVELSALLAQTKFGDYNQNTAKYNY
EELCAKELSSATLNSIVAKHKELEGTSQASAEYQVLQIVSAMENYGIEWHSVRDSEGQKLLIGVGPEGIS
ICKDDFSPINRIAYPVVQMATQSGKNVYLTVTKESGNSIVLLFKMISTRAASGLYRAITETHAFYRCDTV
TSAVMMQYSRDLKGHLASLFLNENINLGKKYVFDIKRTSKEVYDHARRALYNAGVVDLVSRNNQSPSHSP
LKSSESSMNCSSCEGLSCQQTRVLQEKLRKLKEAMLCMVCCEEEINSTFCPCGHTVCCESCAAQLQSCPV
CRSRVEHVQHVYLPTHTSLLNLTVI


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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