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Report for CCDS55529.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
55529.1 Public Homo sapiens X ZNF185 24 110 108 CCDS HistoryNCBI Gene:7739Re-query CCDS DB by CCDS ID:55529.1Re-query CCDS DB by GeneID:7739See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 55529.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000535861.6 ENSP00000440847.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000535861.6Link to Ensembl Protein Viewer:ENSP00000440847.1Re-query CCDS DB by Nucleotide ID:ENST00000535861Re-query CCDS DB by Protein ID:ENSP00000440847
Original member Current member NCBI NM_001178106.1 NP_001171577.1 Accepted alive Link to Nucleotide Sequence:NM_001178106.1Link to Protein Sequence:NP_001171577.1Re-query CCDS DB by Nucleotide ID:NM_001178106Re-query CCDS DB by Protein ID:NP_001171577Link to BLAST:NP_001171577.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001171577.1 721 O15231-6 721 100% 0 0

Chromosomal Locations for CCDS 55529.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 152914490 152914523 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 152914710 152914833 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 152915138 152915203 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 152917131 152917169 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 152917285 152917362 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 152918065 152918154 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 152918983 152919081 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 152920328 152920411 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 152920710 152920748 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 152922173 152922256 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 152922720 152922809 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 152928575 152928661 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 152931672 152931776 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 152932873 152932971 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 152936418 152936513 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 152938074 152938163 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 152945267 152945464 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 152959699 152959896 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 152963839 152963949 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 152965447 152965527 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 152967167 152967238 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 152969382 152969484 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 152970443 152970541 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2166 nt):
ATGAGTATCTCAGCTCTTGGAGGCCGCACCAAAGGGAAGCCTCTGCCACCAGGCGAGGAGGAGCGCAATA
ACGTTCTCAAGCAGATGAAAGTGCGAACCACGCTGAAGGGGGACAAGAGCTGGATTACCAAGCAGGATGA
ATCGGAGGGTCGCACCATAGAGCTGCCCTCAGGCCGGAGTCGCGCCACATCCTTTTCATCAGCTGGGGAG
GTTCCGAAGCCTAGGCCTCCGAGCACAAGGGCTCCCACTGGCTACATCATCCGGGGAGTGTTCACCAAGC
CCATAGACAGCTCTTCCCAGCCCCAGCAGCAGTTCCCCAAGGCCAACGGGACTCCAAAAAGTGCTGCCAG
TCTGGTGAGAACAGCTAACGCTGGTCCTCCCCGCCCCTCCTCCTCTGGCTACAAGATGACCACTGAGGAT
TACAAGAAGCTGGCACCCTACAATATCAGGCGCAGCTCTACATCAGGGGACACCGAGGAGGAGGAGGAGG
AGGAGGTGGTGCCATTCTCCTCAGATGAACAGAAACGGAGGTCAGAGGCTGCAAGCGGTGTTCTGAGGAG
GACAGCTCCCCGGGAGCACTCCTACGTCCTGTCAGCGGCCAAGAAGAGCACTGGTCCTACCCAGGAGACA
CAGGCACCGTTTATCGCGAAGAGGGTGGAGGTGGTGGAAGAGGACGGGCCTTCTGAGAAGAGCCAGGACC
CACCTGCTCTGGCAAGATCCACTCCTGGCTCAAACAGTGCGGATGGAGGCAGGACCAAAGCGTCTCGGGC
AATTTGGATCGAGTGCCTGCCAAGTATGCCTAGCCCCGCTGGGAGCCAGGAGCTCAGCTCAAGAGGTGAG
GAAATTGTCCGCCTGCAGATCCTGACACCCAGGGCAGGACTCCGCCTGGTGGCCCCAGACGTGGAAGGCA
TGAGGTCTTCCCCAGGCAACAAAGACAAGGAGGCCCCCTGCTCCAGAGAGCTCCAGAGGGACTTGGCTGG
TGAGGAGGCTTTCAGGGCCCCCAACACAGATGCTGCAAGGTCAAGTGCACAGTTGAGTGATGGCAATGTG
GGATCCGGAGCCACGGGCTCCCGGCCTGAAGGCTTGGCTGCAGTAGACATCGGCTCCGAGAGAGGAAGGC
TGTGTGCAGCTGCTAGCTTTGCCTCTTTCCTGGAAGACCAGGATGGGCACAGTGCCAACTCTCAGTCCTG
CAAGCCTAGACCAGCAGCCATCAGCTCCAGTGCCACTTCAGTCTCTGCTGTCCCTGCTGATAGGAAGAGC
AACAGCACAGCAGCCCAGGAGGATGCAAAGGCAGACCCAAAGGGGGCCTTGGCTGATTATGAGGGGAAGG
ATGTGGCCACCAGGGTCGGAGAGGCCTGGCAGGAGAGGCCTGGAGCTCCAAGAGGTGGCCAAGGAGACCC
AGCTGTACCCGCTCAGCAACCTGCAGATCCCAGCACCCCAGAGCGGCAGAGCAGCCCCAGCGGATCTGAG
CAACTTGTCAGACGAGAGAGTTGTGGCAGCAGCGTGTTGACTGATTTTGAGGGGAAGGATGTGGCCACCA
AGGTCGGAGAGGCCTGGCAGGACAGGCCTGGAGCCCCAAGAGGTGGCCAAGGAGACCCAGCTGTACCCAC
TCAGCAACCTGCAGATCCCAGTACCCCAGAACAGCAGAACAGCCCCAGCGGATCTGAGCAATTCGTCAGA
CGAGAGAGCTGCACCAGCAGGGTGAGGAGCCCCTCGAGCTGCATGGTCACTGTTACTGTCACTGCCACAT
CTGAGCAGCCTCACATTTATATTCCAGCCCCCGCAAGTGAATTGGACTCCAGCTCTACCACCAAAGGGAT
TCTCTTCGTGAAGGAGTACGTGAATGCTAGTGAAGTGTCTTCTGGGAAGCCAGTATCTGCACGCTATAGC
AACGTCAGCAGCATTGAGGACTCATTCGCCATGGAGAAGAAGCCTCCATGTGGCAGCACTCCATACTCTG
AGAGGACAACTGGAGGGATCTGTACTTACTGCAACCGTGAGATCCGAGACTGTCCAAAGATTACCCTAGA
ACATCTTGGTATCTGCTGCCATGAATATTGCTTTAAGTGTGGGATTTGCAGTAAACCGATGGGCGATCTC
CTGGATCAGATCTTCATTCACCGTGACACCATTCACTGTGGGAAATGCTATGAGAAGCTCTTCTAG

Translation (721 aa):
MSISALGGRTKGKPLPPGEEERNNVLKQMKVRTTLKGDKSWITKQDESEGRTIELPSGRSRATSFSSAGE
VPKPRPPSTRAPTGYIIRGVFTKPIDSSSQPQQQFPKANGTPKSAASLVRTANAGPPRPSSSGYKMTTED
YKKLAPYNIRRSSTSGDTEEEEEEEVVPFSSDEQKRRSEAASGVLRRTAPREHSYVLSAAKKSTGPTQET
QAPFIAKRVEVVEEDGPSEKSQDPPALARSTPGSNSADGGRTKASRAIWIECLPSMPSPAGSQELSSRGE
EIVRLQILTPRAGLRLVAPDVEGMRSSPGNKDKEAPCSRELQRDLAGEEAFRAPNTDAARSSAQLSDGNV
GSGATGSRPEGLAAVDIGSERGRLCAAASFASFLEDQDGHSANSQSCKPRPAAISSSATSVSAVPADRKS
NSTAAQEDAKADPKGALADYEGKDVATRVGEAWQERPGAPRGGQGDPAVPAQQPADPSTPERQSSPSGSE
QLVRRESCGSSVLTDFEGKDVATKVGEAWQDRPGAPRGGQGDPAVPTQQPADPSTPEQQNSPSGSEQFVR
RESCTSRVRSPSSCMVTVTVTATSEQPHIYIPAPASELDSSSTTKGILFVKEYVNASEVSSGKPVSARYS
NVSSIEDSFAMEKKPPCGSTPYSERTTGGICTYCNREIRDCPKITLEHLGICCHEYCFKCGICSKPMGDL
LDQIFIHRDTIHCGKCYEKLF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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