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Report for CCDS1505.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
1505.1 Public Homo sapiens 1 NENF 24 110 108 CCDS HistoryNCBI Gene:29937Re-query CCDS DB by CCDS ID:1505.1See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 1505.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000366988.5 ENSP00000355955.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000366988.5Link to Ensembl Protein Viewer:ENSP00000355955.3Re-query CCDS DB by Nucleotide ID:ENST00000366988Re-query CCDS DB by Protein ID:ENSP00000355955
Original member Current member NCBI NM_013349.5 NP_037481.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_013349.5Link to Protein Sequence:NP_037481.1Re-query CCDS DB by Nucleotide ID:NM_013349Re-query CCDS DB by Protein ID:NP_037481Link to BLAST:NP_037481.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_037481.1 172 Q9UMX5 172 100% 0 0

Chromosomal Locations for CCDS 1505.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 212432944 212433120 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 212442565 212442625 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 212444339 212444442 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 212445830 212446006 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (519 nt):
ATGGTGGGCCCCGCGCCGCGGCGGCGGCTGCGGCCGCTGGCAGCGCTGGCCCTGGTCCTGGCGCTGGCCC
CGGGGCTGCCCACAGCCCGGGCCGGGCAGACACCGCGCCCTGCCGAGCGGGGGCCCCCAGTGCGGCTTTT
CACCGAGGAGGAGCTGGCCCGCTATGGCGGGGAGGAGGAAGATCAGCCCATCTACTTGGCAGTGAAGGGA
GTGGTGTTTGATGTCACCTCCGGAAAGGAGTTTTATGGACGAGGAGCCCCCTACAATGCCTTGACGGGGA
AGGACTCCACTAGAGGGGTAGCCAAGATGTCCTTGGATCCTGCAGACCTCACCCATGACACTACGGGTCT
CACGGCCAAGGAACTGGAGGCCCTGGATGAGGTCTTCACCAAAGTGTACAAAGCCAAATACCCCATCGTC
GGCTACACTGCCCGGAGAATTCTCAATGAGGATGGCAGCCCTAACCTGGACTTCAAGCCTGAAGACCAGC
CCCATTTTGACATCAAGGATGAGTTCTGA

Translation (172 aa):
MVGPAPRRRLRPLAALALVLALAPGLPTARAGQTPRPAERGPPVRLFTEEELARYGGEEEDQPIYLAVKG
VVFDVTSGKEFYGRGAPYNALTGKDSTRGVAKMSLDPADLTHDTTGLTAKELEALDEVFTKVYKAKYPIV
GYTARRILNEDGSPNLDFKPEDQPHFDIKDEF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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