NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS56631.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
56631.1 Public Mus musculus 1 Aamp 23 108 98 CCDS HistoryNCBI Gene:227290Re-query CCDS DB by CCDS ID:56631.1Re-query CCDS DB by GeneID:227290See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 10, NCBI annotation release 38.1, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 56631.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000178235.7 ENSMUSP00000136644.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000178235.7Link to Ensembl Protein Viewer:ENSMUSP00000136644.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000178235Re-query CCDS DB by Protein ID:ENSMUSP00000136644
Original member Current member NCBI NM_001190444.1 NP_001177373.1 Accepted alive Link to Nucleotide Sequence:NM_001190444.1Link to Protein Sequence:NP_001177373.1Re-query CCDS DB by Nucleotide ID:NM_001190444Re-query CCDS DB by Protein ID:NP_001177373Link to BLAST:NP_001177373.1

Chromosomal Locations for CCDS 56631.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 74280234 74280309 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 74280783 74280937 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 74281089 74281179 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 74281329 74281432 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 74281527 74281642 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 74281736 74281819 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 74282027 74282171 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 74282411 74282550 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 74283094 74283213 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 74283886 74284044 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 74284503 74284623 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1311 nt):
ATGGAGTCCGAATCGGAGAGCGGAGCGGCCGCTGACACCCCGCCTCTGGAGACTCTGAGCTTTCACGGAG
ATGAAGAGATCATTGAGGTGGTAGAGCTGGATCCAGGCCCGCCGGACCCGGCAGATGATCTGGCCCAGGA
GATGGAAGACGTGGACTTTGAGGAAGAGGAAGAAGAAGAAGAGGGCAATGACGAGGGCTGGGTCTTGGAA
CCCCAGGAAGGGGTGGTCGGTAGCATGGAGGGCCCGGATGATAGTGAGGTCACCTTTGCATTGCACTCAG
CGTCTGTGTTCTGTGTGAGCCTGGACCCCAAAACCAACACCTTGGCAGTGACAGGGGGCGAAGACGACAA
GGCCTTCGTGTGGAGGCTCGGTGATGGAGAGCTGCTCTTTGAGTGTGCAGGCCACAAAGACTCTGTGACA
TGCGCTGGTTTCAGTCACGATTCCACCCTAGTGGCCACAGGGGACATGAGTGGTCTTTTGAAAGTATGGC
AGGTAGACACCAAGGAAGAAGTCTGGTCCTTTGAAGCAGGAGACCTGGAGTGGATGGAGTGGCACCCTCG
GGCTCCTGTCCTGTTGGCGGGCACAGCCGATGGCAACACTTGGATGTGGAAGGTCCCGAATGGTGACTGT
AAGACCTTTCAGGGCCCCAACTGCCCTGCAACCTGTGGCCGCGTCCTCCCTGATGGGAAGAGAGCTGTGG
TAGGGTATGAAGATGGTACCATCAGGATCTGGGACCTCAAGCAAGGAAACCCCATCCATGTACTAAAAGG
GACTGAGGGTCATCAGGGCCCTCTGACCTGTGTAGCCACCAACCAGGATGGCAGTCTGATCCTGACTGGC
TCTGTAGACTGCCAGGCCAAGCTGGTCAGTGCCACCACTGGCAAGGTGGTGGGTGTGTTCAGACCTGAGA
CAGTCGCCTCCCAGCCCAGCCTGGGAGAGGGGGAGGAGAGTGAGTCTAACTCCGTGGAGTCCTTGGGCTT
CTGCAGTGTCATGCCTCTGGCCGCTGTTGGCTATCTGGACGGAACCTTGGCCATCTATGACCTGTCTACG
CAGACACTCCGGCACCAATGTCAGCACCAGTCGGGCATTGTTCAGCTGCTGTGGGAGGCTGGCACTGCTG
TGGTGTACACCTGTAGCCTGGATGGTGTTGTACGTCTCTGGGATGCCCGGACTGGCCGCCTGCTTACTGA
CTACCGGGGCCACACTGCTGAGATCCTGGACTTTGCCCTCAGCAAAGATGCTTCCCTGGTGGTGACCACA
TCAGGAGACCACAAAGCAAAAGTATTTTGTGTCCAGAGACCTGACCGTTAA

Translation (436 aa):
MESESESGAAADTPPLETLSFHGDEEIIEVVELDPGPPDPADDLAQEMEDVDFEEEEEEEEGNDEGWVLE
PQEGVVGSMEGPDDSEVTFALHSASVFCVSLDPKTNTLAVTGGEDDKAFVWRLGDGELLFECAGHKDSVT
CAGFSHDSTLVATGDMSGLLKVWQVDTKEEVWSFEAGDLEWMEWHPRAPVLLAGTADGNTWMWKVPNGDC
KTFQGPNCPATCGRVLPDGKRAVVGYEDGTIRIWDLKQGNPIHVLKGTEGHQGPLTCVATNQDGSLILTG
SVDCQAKLVSATTGKVVGVFRPETVASQPSLGEGEESESNSVESLGFCSVMPLAAVGYLDGTLAIYDLST
QTLRHQCQHQSGIVQLLWEAGTAVVYTCSLDGVVRLWDARTGRLLTDYRGHTAEILDFALSKDASLVVTT
SGDHKAKVFCVQRPDR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH