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Report for CCDS38331.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
38331.1 Public Mus musculus 2 Zfp335 23 108 98 CCDS HistoryNCBI Gene:329559Re-query CCDS DB by CCDS ID:38331.1See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 38331.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000041361.13 ENSMUSP00000038298.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000041361.13Link to Ensembl Protein Viewer:ENSMUSP00000038298.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000041361Re-query CCDS DB by Protein ID:ENSMUSP00000038298
Original member Current member NCBI NM_199027.2 NP_950192.2 Accepted alive Link to Nucleotide Sequence:NM_199027.2Link to Protein Sequence:NP_950192.2Re-query CCDS DB by Nucleotide ID:NM_199027Re-query CCDS DB by Protein ID:NP_950192Link to BLAST:NP_950192.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_950192.2 1337 A2A5K6 1337 100% 0 0

Chromosomal Locations for CCDS 38331.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 164892164 164892291 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 164892380 164892461 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 164892541 164892606 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 164892687 164892770 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 164892878 164892952 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 164893246 164893349 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 164893473 164893615 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 164893701 164893843 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 164894525 164894899 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 164894978 164895089 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 164895988 164896247 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 164897989 164898083 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 164898184 164898277 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 164899257 164899486 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 164899871 164900031 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 164900111 164900187 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 164900278 164900394 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 164900501 164900519 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 164901418 164901530 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 164902208 164902385 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 164902496 164902736 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 164904841 164904987 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 164907428 164907574 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 164907653 164907958 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 164908155 164908232 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 164909206 164909443 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 164910622 164910822 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4014 nt):
ATGGAGGAGAACGAGGTGGAGAGCAGTAGCGACGCGGCCCCTCGGCCCGGCCAGCCTGAGGAGCCTTCTG
AGAGCGGCCTGGGTGTGTGCACCTCGGAAGCTGTGTCCGCGGACAGCAGCGACGCTGCGACCGTCCCAGG
ATTAACGGAGGCTGACGACTCTGGCGTCGGGCAGAGCTCGGACGGTGGCAACCACTCTGTGGAGGAGGTA
TCTGAGAGCATCTCAACAGACCCTTTGCCTCATGGCTGCCTCCCTGATTCATCTTCTGTGTCCCGGGGAC
CAGTAGCAGAGATGCCTGGTGGCCCCCCAGCTCTGGTGCATTCCAGTGTTCTCCCAGACCCCAGCATGCT
GGTGTCTGACTGCACAGCCTCCTCTTCAGACCTAGGCTCTGCCATTGACAAGATCATCGAATCTACCATT
GGTCCAGACCTCATCCAGAGCTGCATCACTGTGACCAGTGGTGAAGAGGGAGGAGCTGAGACCACACAGT
ACCTGATCCTGCAAGGCCCGGATGACGGCGCTCCCATGGCATCATCCATGTCTACTTCCACCTTGGCCAA
CAGTCTGGCAGCCATTGAAGCCCTGGCTGACGGCCCCACATCCACATCTGCATGCCTTGAGCCTCCCGAG
GAGCCCCAGGGAGATCCCAGCTCTGTAGCGCAGCAACCCCCAGCTCCTGTCACTGAAGAGCTGGACCTGC
AAAGCTTGGAGGCCATGATGGAGGTGGTGGTTGTGCAACAGTTCAAGTGCAAGATGTGCCAGTACCGGAG
CAGCACCAAGGCAACCCTGCTCCGCCACATGCGGGAACGGCACTTCCGCCCAGCACTAGCAGCAGCAGCA
GCAGCAACTGGTAAAAGGGGCCGTGTACGGAAGTGGGGCACTTCCACCAAGACCACAGAGGAGGACAGGC
CAGAGGAGGAGGAGGAGGACGACGACATCGTGGATGCCGGGGCGATTGACGATCTGGAGGAGGACAGTGA
CTACAATCCAGCTGAGGATGAGCCCCGGGGCCGGCAGCTAAGGCTCCAGCGCCCCACACCCAGTACCCCG
AGACCTCGACGGAGGCCTGGCCGGCCCCGAAAGCTGCCTCGCCTAGAGACCTCAGACCTTCATGATGGTG
TAGGACAGCCTCTAGTGAGTTCGCAGAGCACACAGAGCCCTCCAGAGTTGCAGGATCTCGAGGCTCCCAG
CTCCTCGGGCCTGAGGGCCCTGGGCAAGGTGGGGAGGGGCCTGGTGGAATCAGGCGTTAGTCAGTCGGAT
GCTGAGAACGCAGCCCCATCGTGCCAGGATGAAGCTGATGCCCCACCCCGCCGCCGCGGAAGACCTTCCA
GGCGGTTCCTAGGGAAGAAATACCGAAAGTACTACTATAAGTCACCCAAGCCACTGCTCAGGCCTTATCT
GTGCCGCATATGTGGCTCACGCTTCCTGTCCCACGAAGACCTTCGCTTCCACGTCAACTCCCATGAGGCT
GGTGACCCACAGCTCTTCAGGTGCCTGCAGTGCAGCTACCGCTCCCGCCGCTGGTCCTCGCTCAAGGAGC
ACATGTTCAACCACGTGGGCAGCAAGCCCTACAAGTGTGACGAGTGCAGCTACACCAGTGTCTACCGCAA
GGATGTTATTCGCCACGCGGCTGTGCACAGCCAGGACCGAAAGAAGAGGCCGGATCCGACCCCAAAGCTG
AGCTCCTTCCCTTGCCCAGTGTGCGGCCGTGTCTACCCCATGCAGAAGAGGCTAACACAGCACATGAAGA
CTCACAGCACCGAGAAGCCACACATGTGCGATAAGTGTGGAAAGTCCTTTAAGAAGCGCTACACCTTCAA
AATGCACCTGCTCACACACATCCAGGCCGTTGCCAACCGCAGATTCAAGTGTGAGTTCTGCGAGTTTGTT
TGTGAGGACAAGAAGGCACTGTTGAACCACCAACTGTCCCACGTGAGCGACAAGCCCTTCAAATGCAGCT
TTTGTCCCTACCGCACCTTCCGCGAGGACTTCCTGCTGTCTCATGTGGCTGTCAAGCACACAGGTGCCAA
GCCCTTCGCCTGTGAGTACTGCCACTTCAGCACTCGCCACAAGAAGAACCTGCGCCTCCACGTAAGATGC
CGCCATGCCAACAGCTTTGAGGAGTGGGGACGGCGCCACCCTGAGGAGCCCCCGTCCCGCCGCCGCCCCT
TCTTCTCTCTACAACAGATAGAAGAGCTGAAGCAGCAACACAGCACGGCCCCTGGCCCTCCCCTCAGCTC
ACCAGGACCCGAGGCCCCCCAAGAACCAGCACCTTTCCAGTCACCTGAGACCCCCCCACTACTCTGTCCT
GATGCACTAGGTGGCACCACAATCATCTACCAGCAAGGAGCCGAGGAGTCCACTGCAGTGGCCACTCAGA
CAGCCTTGGATCTGCTGTTGAATATGAGCGCCCAACGAGAACTGGGGGCCACGGCCTTGCAGGTGGCGGT
GGTAAAGTCAGAGGGCATCGAGGCAGAGTTGACGTCTACTGGTGGGCAACCTTCCCCTGAAGACACCACT
CCACGGGTGGTGACACTTCATATGGCAGAATCAGGGAGTAGTGTGGCAGCTGAGAGCCAGCTAGGCCCAT
CTGATCTACAGCAGATTGCCTTGCCATCTGGGCCATTTGGTGGGGCCAGCTACAGTGTCATCACGGCACC
CCCAGTGGAGGGGAGGACATCAGCCTCAGGCCCACCTTACAGGGAAGAACCTCCCGGGGAGGCAGCCCAG
GCTGTGGTTGTGAGCGACACTCTCAAGGAGGCTGGCACCCACTACATCATGGCAGCTGATGGGACCCAAT
TGCACCACATTGAGTTGACTGCAGATGGCTCCATCTCCTTCCCAAGCCCAGATACTCTGGCCCCTGGAAC
CAAGTGGCCCCTGCTGCAGTGTGGAGGGCCACCCAGAGATGGTTCTGAGGTTCTGTCTCCAACAAAGACC
CACCATATGGGAGGCTCCCAGGGCTCCTCCACCCCACCCCCTGCAGCCAGCCATACCCTAGGCCTGGTAG
TACCCCAATCCCCACCGTCTGCAGCAGCTTCCTCAACAAAGAAGTTTTCCTGCAAGGTGTGCTCAGAGGC
CTTTCCTAGCCGCGCAGAGATGGAGAGTCACAAGCGGGCCCATGCTGGGCCTGCTGCCTTCAAGTGCCCT
GACTGCCCCTTCAGTGCTCGCCAGTGGCCTGAGGTCCGGGCTCACATGGCACAGCACTCAAGCCTGAGGC
CCCACCAGTGCAATCAGTGTAGCTTCGCCTCCAAGAACAAGAAGGATCTGAGGCGGCACATGCTAACGCA
CACCAACGAGAAGCCATTCTCATGCCACGTCTGCGGGCAGCGTTTCAACAGGAACGGGCACCTCAAATTC
CACATCCAGCGGCTACATAGCATTGATGGGAGAAAGACTGGGACTTCTACAGCCCGAGCCCCAGCCCAGA
CCATCATCCTCAATAGTGAAGAGGAGACACTGGCCACACTACACACTGCCTTCCAGTCCAGTCACGGGGT
TCTGGGTACAGAGCGGCTACAGCAGGCACTGAGCCAAGAACACATCATTGTGGCCCAGGAACAGACAGTG
ACCAATCAGGAGGAAGCTACCTACATCCAGGAAATCACAGCAGATGGCCAGACAGTACAGCATCTGGTGA
CCTCAGACAACCAGGTTCAGTATATCATCTCTCAGGATGGTGTCCAGCACTTACTGCCTCAGGAGTACGT
TGTGGTCCCTGATGGCCATCATATCCAGGTCCAGGAAGGCCAGATCACACACATCCAGTATGAGCAAGGT
ACTCCATTCCTGCAGGAGTCCCAGATCCAGTATGTACCTGTCTCCCCCAGCCAGCAGCTTGTCACCCAGG
CTCAGCTGGAAGCTGCCGCACACTCCGCTGTCACAGCGGTGGCTGATGCTGCCATGGCCCAAGCCCAGGG
CCTGTTTGGCACTGAGGAGGCAGTGCCGGAGCAGATCCACCAGCTGCAGCATCAGGGCATCGAGTACGAC
GTCATTACCCTCTCGGATGACTGA

Translation (1337 aa):
MEENEVESSSDAAPRPGQPEEPSESGLGVCTSEAVSADSSDAATVPGLTEADDSGVGQSSDGGNHSVEEV
SESISTDPLPHGCLPDSSSVSRGPVAEMPGGPPALVHSSVLPDPSMLVSDCTASSSDLGSAIDKIIESTI
GPDLIQSCITVTSGEEGGAETTQYLILQGPDDGAPMASSMSTSTLANSLAAIEALADGPTSTSACLEPPE
EPQGDPSSVAQQPPAPVTEELDLQSLEAMMEVVVVQQFKCKMCQYRSSTKATLLRHMRERHFRPALAAAA
AATGKRGRVRKWGTSTKTTEEDRPEEEEEDDDIVDAGAIDDLEEDSDYNPAEDEPRGRQLRLQRPTPSTP
RPRRRPGRPRKLPRLETSDLHDGVGQPLVSSQSTQSPPELQDLEAPSSSGLRALGKVGRGLVESGVSQSD
AENAAPSCQDEADAPPRRRGRPSRRFLGKKYRKYYYKSPKPLLRPYLCRICGSRFLSHEDLRFHVNSHEA
GDPQLFRCLQCSYRSRRWSSLKEHMFNHVGSKPYKCDECSYTSVYRKDVIRHAAVHSQDRKKRPDPTPKL
SSFPCPVCGRVYPMQKRLTQHMKTHSTEKPHMCDKCGKSFKKRYTFKMHLLTHIQAVANRRFKCEFCEFV
CEDKKALLNHQLSHVSDKPFKCSFCPYRTFREDFLLSHVAVKHTGAKPFACEYCHFSTRHKKNLRLHVRC
RHANSFEEWGRRHPEEPPSRRRPFFSLQQIEELKQQHSTAPGPPLSSPGPEAPQEPAPFQSPETPPLLCP
DALGGTTIIYQQGAEESTAVATQTALDLLLNMSAQRELGATALQVAVVKSEGIEAELTSTGGQPSPEDTT
PRVVTLHMAESGSSVAAESQLGPSDLQQIALPSGPFGGASYSVITAPPVEGRTSASGPPYREEPPGEAAQ
AVVVSDTLKEAGTHYIMAADGTQLHHIELTADGSISFPSPDTLAPGTKWPLLQCGGPPRDGSEVLSPTKT
HHMGGSQGSSTPPPAASHTLGLVVPQSPPSAAASSTKKFSCKVCSEAFPSRAEMESHKRAHAGPAAFKCP
DCPFSARQWPEVRAHMAQHSSLRPHQCNQCSFASKNKKDLRRHMLTHTNEKPFSCHVCGQRFNRNGHLKF
HIQRLHSIDGRKTGTSTARAPAQTIILNSEEETLATLHTAFQSSHGVLGTERLQQALSQEHIIVAQEQTV
TNQEEATYIQEITADGQTVQHLVTSDNQVQYIISQDGVQHLLPQEYVVVPDGHHIQVQEGQITHIQYEQG
TPFLQESQIQYVPVSPSQQLVTQAQLEAAAHSAVTAVADAAMAQAQGLFGTEEAVPEQIHQLQHQGIEYD
VITLSDD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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