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Report for CCDS56975.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
56975.1 Public Mus musculus 15 Prlr 23 108 98 CCDS HistoryNCBI Gene:19116Re-query CCDS DB by CCDS ID:56975.1Re-query CCDS DB by GeneID:19116See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 10, NCBI annotation release 38.1, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 56975.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000148257.7 ENSMUSP00000118355.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000148257.7Link to Ensembl Protein Viewer:ENSMUSP00000118355.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000148257Re-query CCDS DB by Protein ID:ENSMUSP00000118355
Original member Current member NCBI NM_001253782.2 NP_001240711.1 Accepted alive Link to Nucleotide Sequence:NM_001253782.2Link to Protein Sequence:NP_001240711.1Re-query CCDS DB by Nucleotide ID:NM_001253782Re-query CCDS DB by Protein ID:NP_001240711Link to BLAST:NP_001240711.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001240711.1 303 Q08501-2 303 100% 0 0

Chromosomal Locations for CCDS 56975.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 10314219 10314273 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 10317503 10317635 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 10319175 10319344 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 10322386 10322555 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 10325271 10325412 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 10325867 10325966 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 10326476 10326545 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 10345658 10345729 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (912 nt):
ATGTCATCTGCACTTGCTTACATGCTGCTTGTCCTCAGCATCAGCCTCCTGAATGGACAGTCACCACCTG
GAAAACCTGAAATCCACAAATGTCGTTCCCCTGACAAGGAAACATTCACCTGCTGGTGGAATCCTGGGTC
AGATGGAGGACTCCCCACCAATTATTCATTGACATACAGCAAAGAAGGAGAGAAAAACACCTATGAATGT
CCAGACTACAAAACCAGTGGCCCCAATTCCTGTTTCTTTAGCAAGCAGTACACTTCCATATGGAAAATAT
ACATCATCACAGTAAATGCCACGAACGAAATGGGAAGCAGTACCTCGGATCCACTTTATGTGGATGTGAC
TTACATTGTTGAACCAGAGCCTCCTCGGAACCTGACTTTAGAAGTGAAACAACTAAAAGACAAAAAAACA
TATCTGTGGGTAAAATGGTTGCCACCTACCATAACTGATGTAAAAACTGGTTGGTTTACAATGGAATATG
AAATTCGATTAAAGTCTGAAGAAGCAGATGAGTGGGAGATCCACTTCACAGGTCATCAAACACAATTTAA
GGTTTTTGACTTATATCCAGGACAAAAGTATCTTGTCCAGACTCGCTGCAAGCCAGACCATGGATACTGG
AGTAGATGGGGCCAGGAGAAATCTATTGAAATACCAAATGACTTCACCTTGAAAGACACAACTGTGTGGA
TCATTGTGGCCGTTCTCTCTGCTGTCATCTGTTTGATTATGGTCTGGGCAGTGGCTTTGAAGGGTTATAG
CATGATGACCTGCATCTTTCCACCAGTTCCGGGGCCAAAAATAAAAGGATTTGATACTCATCTGCTAGAG
CTCTGGTGTTCTATTCTCCAGTTGACTTCCCTGGTGAAGATTCCAACAACTGAGTTTTTATGTGATTTAT
GA

Translation (303 aa):
MSSALAYMLLVLSISLLNGQSPPGKPEIHKCRSPDKETFTCWWNPGSDGGLPTNYSLTYSKEGEKNTYEC
PDYKTSGPNSCFFSKQYTSIWKIYIITVNATNEMGSSTSDPLYVDVTYIVEPEPPRNLTLEVKQLKDKKT
YLWVKWLPPTITDVKTGWFTMEYEIRLKSEEADEWEIHFTGHQTQFKVFDLYPGQKYLVQTRCKPDHGYW
SRWGQEKSIEIPNDFTLKDTTVWIIVAVLSAVICLIMVWAVALKGYSMMTCIFPPVPGPKIKGFDTHLLE
LWCSILQLTSLVKIPTTEFLCDL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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