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Report for CCDS26015.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
26015.1 Public Mus musculus 12 Ccdc177 23 108 98 CCDS HistoryNCBI Gene:380768Re-query CCDS DB by CCDS ID:26015.1See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 26015.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000073251.7 ENSMUSP00000072982.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000073251.7Link to Ensembl Protein Viewer:ENSMUSP00000072982.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000073251Re-query CCDS DB by Protein ID:ENSMUSP00000072982
Original member Current member NCBI NM_001008423.2 NP_001008423.2 Accepted alive Link to Nucleotide Sequence:NM_001008423.2Link to Protein Sequence:NP_001008423.2Re-query CCDS DB by Nucleotide ID:NM_001008423Re-query CCDS DB by Protein ID:NP_001008423Link to BLAST:NP_001008423.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001008423.2 706 Q3UHB8 706 100% 0 0

Chromosomal Locations for CCDS 26015.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 12 (NC_000078.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 80757378 80759498 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2121 nt):
ATGGTGGACCCGGTGCCAGAAGAGGAGAAAGAGGGAGCGGAGCCCGGTGGCTCTGAAGGGGATGAGGCCA
CAGCGTCCGAGCCCCCCGATGCCCAGGGAGCCCAGCAGCCGGCTGCCTCCTCGGCCTCCGCCTCCGCGGC
GGCGCCCCGTAAGGCTGAAGTCCCCTGCGGGGCAGAAGGTGGACGTCGGGAGCAGTCTCCGTTGCTGCAC
CTCGATCTCTTCAATTTCGCCTGCCCCGAGGCAGAGGGCAGCCGCTACGTCCTGACCAGCCCCCGCTCTC
TGGAGGCCTGCGCCCGATGCGCGGTCAAGCCCGTGGAGCTGCTGCCTCGGGCCCTGGCCGACCTGGTGCG
CGAGGCCCCGGGCCGCTCCATGCGCGTGGCCACCGGCCTGTACGAGGCCTACGAGGCGGAGCGCCTGGCC
AAACTGCAGCAGTGCCGCGCCGAGCGCGAGCGCATCATGCGCGAGGAGAAGCGGCGCCTGTTCACACCGA
AGGGTCCGGCGGCAGCCCCGGCCTCGGCCTCAGCCTCAGCCTCAGCCTCGGCCCTGAGCGGGGGCAGCAG
CAGCAGCTGCAGCAGCAGCAGCAGCCTCCCGGCCTCGCCCGCCTCGCGAGTTGCTCGAAGGACTTCTCCC
AGTCCCCCCGCCAGGAGCCGGCCTCCGCCCGCCGGTTCTCGGACAGGTAGAAAGAGCCACTCGCTGGACT
CGCTCTCCCGCCGGAGGGACGGTGCCCTGAGCTCCGAGTCCGGGGCCTCGTCGTCGTCCTACAGCGGGGA
GAGCCTTCGGGAGCTTCGCTGGCCACCTCGAGCTTCCGCCAGGAACAGCTGCCCCGCGGGCTCGGCGTCG
TCTGCACCTAACCCACTGGGCCGCCCTTCGGCCCTTGCTCTGGTTCCGCTCACGGCCCGCAGCTTCAGCC
TCGGAGACCTGAGCCACTCGCCGCAGACAGCCCAGCATGTGGAGCGCATCGTCCGCCAAGTGCGCGCCGA
GCGAGGCCTGCGCGGGGTACCCGAGCGCGACCGCAAGATCGCCGCCCTCATGCTGGCCCGGCACCAGGAA
GAGCGCCTGTTGCTGGAGCAGCGCGCCGCGGCCCACGGCCAGTGGGAGCAGCAGCGCGTGCGCGCCGAAC
AGCGGCGGGAGCGCGAGGAGCGAGAGAAGCAGCGCGCGCTGGAGCGGGGCCGGCGGGCCTGGGCGGCGCA
GGTGGAGGAGCGGCGCGGTCGCCGGGGCCGGGAGGAGCGCGAGGCCGCGCGGAGGCGGCAGCAGCAGTGC
GAGCGCAGCGAGGAGCGGCGGCGGGAGCTGGCGGAGCGTCAGGGACTGCTGCGGCGGGAGCGGGTGGAAC
GCGCCGCGCGGGACGACCGGCTGCGCAAGCTGCAGCAGGAGCAGAACCTGAAGCAGAGGGAGGAGGGCCG
GCAAGAGGGGCGGGAGCGCGCGGAGCTGGTCCGCCGGGAGCGCGCCCAGCGGGCGGCGCGCGCCCGAGAG
CGGCAAGAGGGCCAACTGCAGCGCGAGAAGCGCGAGCTGAGCCGGGCCGAGCGGGCGCGCCACGAGGCGC
TGCTTAGAGGCCGAGTCCGGCAGCAGCAGGAGGAGCGGGAGGGCCTGCGGAGCTCCCTGGAGGCCAGCTT
GGGCCGCGCGCAAGAGAACTACGAGCAGCTGCAGGAACAGCGCGCCCGGGAGCTGCGGGAGCGCGCGCGG
AGAGAGGAGCTCCAGGGTCGGCGGGCGAAGGAAGCGGCCGAGCGCAAAGAGCGGGAGCATCAGGCGCACT
TGGAGGCGCTGGCGCGGGCGGGAGAACGACGGCTGCAGCACGCGGCGCAGGTGGCCGAAGAGGCTGTGCA
GCAGAAGGCCCGGCGCGTGGTTCAGACCCGCCTGGAAAAGGAGAGGGCCCAGCGTGCCAACAAGGAGAAG
GTAGAGAGAGACGAAGACTGCCGCCGCCGCGAGCTGCTGCAGGCCATTGGGCGCAAGCTGGAGCGCAGTG
AGCAGCTCTCTCGAGAACGGCGAAGCGCGCTGGAGAGCGCTCGCTCCACGGCCCGGGCCTCCTTCCATGT
GCGGGAGAAGGTGCGGGAGGAGACCAACACGCGCTCTTTTGACCGCATGGTGCGAGAGGCCCAGCTACAT
GCCAGCCTGGACCGCAAATGA

Translation (706 aa):
MVDPVPEEEKEGAEPGGSEGDEATASEPPDAQGAQQPAASSASASAAAPRKAEVPCGAEGGRREQSPLLH
LDLFNFACPEAEGSRYVLTSPRSLEACARCAVKPVELLPRALADLVREAPGRSMRVATGLYEAYEAERLA
KLQQCRAERERIMREEKRRLFTPKGPAAAPASASASASASALSGGSSSSCSSSSSLPASPASRVARRTSP
SPPARSRPPPAGSRTGRKSHSLDSLSRRRDGALSSESGASSSSYSGESLRELRWPPRASARNSCPAGSAS
SAPNPLGRPSALALVPLTARSFSLGDLSHSPQTAQHVERIVRQVRAERGLRGVPERDRKIAALMLARHQE
ERLLLEQRAAAHGQWEQQRVRAEQRREREEREKQRALERGRRAWAAQVEERRGRRGREEREAARRRQQQC
ERSEERRRELAERQGLLRRERVERAARDDRLRKLQQEQNLKQREEGRQEGRERAELVRRERAQRAARARE
RQEGQLQREKRELSRAERARHEALLRGRVRQQQEEREGLRSSLEASLGRAQENYEQLQEQRARELRERAR
REELQGRRAKEAAERKEREHQAHLEALARAGERRLQHAAQVAEEAVQQKARRVVQTRLEKERAQRANKEK
VERDEDCRRRELLQAIGRKLERSEQLSRERRSALESARSTARASFHVREKVREETNTRSFDRMVREAQLH
ASLDRK


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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