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Report for CCDS44983.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
44983.1 Public Homo sapiens 12 CFAP73 24 110 108 CCDS HistoryNCBI Gene:387885Re-query CCDS DB by CCDS ID:44983.1See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 44983.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000335621.11 ENSP00000333915.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000335621.11Link to Ensembl Protein Viewer:ENSP00000333915.6Re-query CCDS DB by Nucleotide ID:ENST00000335621Re-query CCDS DB by Protein ID:ENSP00000333915
Original member Current member NCBI NM_001144872.3 NP_001138344.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001144872.3Link to Protein Sequence:NP_001138344.1Re-query CCDS DB by Nucleotide ID:NM_001144872Re-query CCDS DB by Protein ID:NP_001138344Link to BLAST:NP_001138344.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001138344.1 308 A6NFT4 308 100% 0 0

Chromosomal Locations for CCDS 44983.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 113149858 113149913 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 113151918 113152023 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 113152783 113152887 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 113153208 113153408 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 113154414 113154635 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 113155260 113155418 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 113157602 113157679 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (927 nt):
ATGGCGGTGCCCTGGGAGGAATATTTCCGACTGGCTTTGCAAGAGAAACTGTCTACAAAGCTGCCAGAGC
AG
GCTGAGGATCATGTCCCACCAGTACTGCGTCTCCTGGAGAAGAGGCAAGAGCTGGTAGATGCAGACCA
G
GCCCTGCAGGCCCAGAAGGAGGTGTTCCGCACCAAGACGGCAGCCCTGAAACAGCGTTGGGAACAGCTG
GAA
CAAAAGGAGCGGGAGCTAAAGGGATCGTTCATCCGCTTTGACAAGTTTTTGCAGGACTCCGAGGCCC
GG
CGCAATCGCGCGCTGCGGAGGGCGGCGGAGGAGAGGCACCAGGCGGGCCGTCGGGAGGTGGAGGCGCT
G
CGTCTGTGGACCCAGCTCCAGGAGCTACGGCGGGAACACGCGCGGCTGCAGCGCCGGCTTAAGCGCCTG
GAG
CCCTGCGCGCGCCTGCTGGAGCAAGCGCTGGAGCTGCTGCCCGGGTTCCAAGAGGTTCCGGAGCTGG
TG
GCGCGCTTCGACGGCCTGGCCGAGACGCAGGCGGCGCTGAGGCTCAGGGAGCGCGAGCAGCTCGCGGA
G
CTGGAGGCGGCGCGAGCGCGGCTGCAGCAGCTGCGGGACGCCTGGCCGGACGAGGTGCTCGCACAGGGC
CAG
CGGCGGGCACAGCTGCAGGAGCGCCTGGAGGCTGCCAGGGAGCGTACGCTGCAGTGGGAATCCAAGT
GG
ATTCAGATTCAGAACACAGCAGCGGAGAAGACTCTGCTCCTGGGACGCAGCAGGATGGCTGTGCTCAA
C
CTGTTCCAGCTAGTGTGCCAGCATCAGGGGCAGCCTCCCACCCTGGACATCGAGGACACGGAGGGACAG
CTA
GAGCACGTGAAGCTGTTCATGCAGGACCTCTCTGCCATGCTGGCCGGCCTGGGTCAGGCTGAGCCTG
CA
GCCCCTGCCTCCTAG


Translation (308 aa):
MAVPWEEYFRLALQEKLSTKLPEQAEDHVPPVLRLLEKRQELVDADQALQAQKEVFRTKTAALKQRWEQL
E
QKERELKGSFIRFDKFLQ
DSEARRNRALRRAAEERHQAGRREVEALRLWTQLQELRREHARLQRRLKRL
E
PCARLLEQALELLPG
FQEVPELVARFDGLAETQAALRLREREQLAELEAARARLQQLRDAWPDEVLAQG
Q
RRAQLQERLEAARERTLQW
ESKWIQIQNTAAEKTLLLGRSRMAVLNLFQLVCQHQGQPPTLDIEDTEGQ
L
EH
VKLFMQDLSAMLAGLGQAEPAAPAS



Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser