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Report for CCDS30322.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
30322.1 |
Public |
Mus musculus |
X |
Cited1 |
23 |
108 |
98 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:12705](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:30322.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:12705](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome X in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 30322.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENSMUST00000050551.9 |
ENSMUSP00000051789.3 |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENSMUST00000050551.9](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSMUSP00000051789.3](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENSMUST00000050551](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSMUSP00000051789](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENSMUST00000101336.9 |
ENSMUSP00000098890.3 |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENSMUST00000101336.9](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSMUSP00000098890.3](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENSMUST00000101336](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSMUSP00000098890](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001276466.1 |
NP_001263395.1 |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001276466.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001263395.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001276466](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001263395](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001263395.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001276473.1 |
NP_001263402.1 |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001276473.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001263402.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001276473](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001263402](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001263402.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_007709.4 |
NP_031735.1 |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_007709.4](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_031735.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_007709](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_031735](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_031735.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 30322.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (612 nt): ATGCCAACTATGTCGAGGCCTGCACTTGATGTCAAGGGTGGCACCACCTCTGGGAAGGAGGATGCCAACC AGGAGATGAACTCTCTGGCCTACTCCAACCTTGGAGTGAAGGATCGCAAGGCAGTGACTGTCCTGCACTA CCCCGGGGTCACCGCAAATGGAGCCAAAGCCAACGGAGTTCCCACTAGCTCCTCTGGATCGACATCTCCA ATAGGCTCTCCTACTGCCACCCCTTCTTCCAAACCCCCATCCTTCAACCTGCATCCTACCCCTCACCTGA TGGCCAGCATGCAGCTTCAGAAGCTTAATAGCCAGTACCAAGGGGCTGCGGCTACTGCTGCTGCTGCCCT CACTGGTGCAGGCCTACCAGGGGAGGAAGAGCCCATGCAAAACTGGGTCACCGCCCCTCTGGTAGTGGGA GGGTCTCCGGGATCTGTCTCTCCTCCTGCTGGTGCCCAGAGCCCTGCTCTCATTGATTCTGACCCGGTGG ATGAGGAGGTGCTGATGTCTCTGGTGGTTGAATTGGGGCTAGACCGAGCCAATGAGCTTCCCGAGCTGTG GCTGGGGCAGAATGAGTTTGATTTCACTGCAGATTTTCCCTCTGGCTGCTGA
Translation (203 aa): MPTMSRPALDVKGGTTSGKEDANQEMNSLAYSNLGVKDRKAVTVLHYPGVTANGAKANGVPTSSSGSTSP IGSPTATPSSKPPSFNLHPTPHLMASMQLQKLNSQYQGAAATAAAALTGAGLPGEEEPMQNWVTAPLVVG GSPGSVSPPAGAQSPALIDSDPVDEEVLMSLVVELGLDRANELPELWLGQNEFDFTADFPSGC
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