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Report for CCDS4808.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
4808.1 Public Homo sapiens 6 FKBP5 24 110 108 CCDS HistoryNCBI Gene:2289Re-query CCDS DB by CCDS ID:4808.1Re-query CCDS DB by GeneID:2289See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 4808.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000357266.9 ENSP00000349811.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000357266.9Link to Ensembl Protein Viewer:ENSP00000349811.3Re-query CCDS DB by Nucleotide ID:ENST00000357266Re-query CCDS DB by Protein ID:ENSP00000349811
Original member Current member EBI ENST00000539068.5 ENSP00000441205.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000539068.5Link to Ensembl Protein Viewer:ENSP00000441205.1Re-query CCDS DB by Nucleotide ID:ENST00000539068Re-query CCDS DB by Protein ID:ENSP00000441205
Original member Current member EBI ENST00000536438.5 ENSP00000444810.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000536438.5Link to Ensembl Protein Viewer:ENSP00000444810.1Re-query CCDS DB by Nucleotide ID:ENST00000536438Re-query CCDS DB by Protein ID:ENSP00000444810
Original member Current member NCBI NM_001145775.3 NP_001139247.1 Accepted alive Link to Nucleotide Sequence:NM_001145775.3Link to Protein Sequence:NP_001139247.1Re-query CCDS DB by Nucleotide ID:NM_001145775Re-query CCDS DB by Protein ID:NP_001139247Link to BLAST:NP_001139247.1
Original member Current member NCBI NM_001145776.2 NP_001139248.1 Accepted alive Link to Nucleotide Sequence:NM_001145776.2Link to Protein Sequence:NP_001139248.1Re-query CCDS DB by Nucleotide ID:NM_001145776Re-query CCDS DB by Protein ID:NP_001139248Link to BLAST:NP_001139248.1
Original member Current member NCBI NM_004117.4 NP_004108.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_004117.4Link to Protein Sequence:NP_004108.1Re-query CCDS DB by Nucleotide ID:NM_004117Re-query CCDS DB by Protein ID:NP_004108Link to BLAST:NP_004108.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001139247.1 457 Q13451-1 457 100% 0 0
NP_001139248.1 457 Q13451-1 457 100% 0 0
NP_004108.1 457 Q13451-1 457 100% 0 0

Chromosomal Locations for CCDS 4808.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 35575835 35575942 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 35576994 35577233 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 35580036 35580221 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 35587034 35587117 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 35591130 35591220 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 35597248 35597404 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 35619096 35619210 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 35620132 35620274 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 35637014 35637158 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 35642720 35642824 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1374 nt):
ATGACTACTGATGAAGGTGCCAAGAACAATGAAGAAAGCCCCACAGCCACTGTTGCTGAGCAGGGAGAGG
ATATTACCTCCAAAAAAGACAGGGGAGTATTAAAGATTGTCAAAAGAGTGGGGAATGGTGAGGAAACGCC
GATGATTGGAGACAAAGTTTATGTCCATTACAAAGGAAAATTGTCAAATGGAAAGAAGTTTGATTCCAGT
CATGATAGAAATGAACCATTTGTCTTTAGTCTTGGCAAAGGCCAAGTCATCAAGGCATGGGACATTGGGG
TGGCTACCATGAAGAAAGGAGAGATATGCCATTTACTGTGCAAACCAGAATATGCATATGGCTCGGCTGG
CAGTCTCCCTAAAATTCCCTCGAATGCAACTCTCTTTTTTGAGATTGAGCTCCTTGATTTCAAAGGAGAG
GATTTATTTGAAGATGGAGGCATTATCCGGAGAACCAAACGGAAAGGAGAGGGATATTCAAATCCAAACG
AAGGAGCAACAGTAGAAATCCACCTGGAAGGCCGCTGTGGTGGAAGGATGTTTGACTGCAGAGATGTGGC
ATTCACTGTGGGCGAAGGAGAAGACCACGACATTCCAATTGGAATTGACAAAGCTCTGGAGAAAATGCAG
CGGGAAGAACAATGTATTTTATATCTTGGACCAAGATATGGTTTTGGAGAGGCAGGGAAGCCTAAATTTG
GCATTGAACCTAATGCTGAGCTTATATATGAAGTTACACTTAAGAGCTTCGAAAAGGCCAAAGAATCCTG
GGAGATGGATACCAAAGAAAAATTGGAGCAGGCTGCCATTGTCAAAGAGAAGGGAACCGTATACTTCAAG
GGAGGCAAATACATGCAGGCGGTGATTCAGTATGGGAAGATAGTGTCCTGGTTAGAGATGGAATATGGTT
TATCAGAAAAGGAATCGAAAGCTTCTGAATCATTTCTCCTTGCTGCCTTTCTGAACCTGGCCATGTGCTA
CCTGAAGCTTAGAGAATACACCAAAGCTGTTGAATGCTGTGACAAGGCCCTTGGACTGGACAGTGCCAAT
GAGAAAGGCTTGTATAGGAGGGGTGAAGCCCAGCTGCTCATGAACGAGTTTGAGTCAGCCAAGGGTGACT
TTGAGAAAGTGCTGGAAGTAAACCCCCAGAATAAGGCTGCAAGACTGCAGATCTCCATGTGCCAGAAAAA
GGCCAAGGAGCACAACGAGCGGGACCGCAGGATATACGCCAACATGTTCAAGAAGTTTGCAGAGCAGGAT
GCCAAGGAAGAGGCCAATAAAGCAATGGGCAAGAAGACTTCAGAAGGGGTCACTAATGAAAAAGGAACAG
ACAGTCAAGCAATGGAAGAAGAGAAACCTGAGGGCCACGTATGA

Translation (457 aa):
MTTDEGAKNNEESPTATVAEQGEDITSKKDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNGKKFDSS
HDRNEPFVFSLGKGQVIKAWDIGVATMKKGEICHLLCKPEYAYGSAGSLPKIPSNATLFFEIELLDFKGE
DLFEDGGIIRRTKRKGEGYSNPNEGATVEIHLEGRCGGRMFDCRDVAFTVGEGEDHDIPIGIDKALEKMQ
REEQCILYLGPRYGFGEAGKPKFGIEPNAELIYEVTLKSFEKAKESWEMDTKEKLEQAAIVKEKGTVYFK
GGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDKALGLDSAN
EKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQNKAARLQISMCQKKAKEHNERDRRIYANMFKKFAEQD
AKEEANKAMGKKTSEGVTNEKGTDSQAMEEEKPEGHV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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