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Report for CCDS24663.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
24663.1 Public Mus musculus 11 Cdkn2aipnl 23 108 98 CCDS HistoryNCBI Gene:52626Re-query CCDS DB by CCDS ID:24663.1See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 24663.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000102763.4 ENSMUSP00000099824.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000102763.4Link to Ensembl Protein Viewer:ENSMUSP00000099824.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000102763Re-query CCDS DB by Protein ID:ENSMUSP00000099824
Original member Current member NCBI NM_029976.3 NP_084252.1 Accepted alive Link to Nucleotide Sequence:NM_029976.3Link to Protein Sequence:NP_084252.1Re-query CCDS DB by Nucleotide ID:NM_029976Re-query CCDS DB by Protein ID:NP_084252Link to BLAST:NP_084252.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_084252.1 116 Q9D211 116 100% 0 0

Chromosomal Locations for CCDS 24663.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 11 (NC_000077.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 51967719 51967957 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 51970144 51970243 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 51975900 51975911 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (351 nt):
ATGGTGGGTGGCGAGGCCAGCGCCGCGGTGGAGAAGCTAGTTTCCGGCGTGCGGCAGGCCGCCGACTTCG
CCGAGCAGTTTCGTTCCTACTCGGAGAGCGAGAAGCAATGGAAAGCGCGCATGGAGTTCATCCTGCGCCA
CCTGCCTGACTACCGAGACCCACCCGACGGCGGCGGCCGCCTGGACCAGCTGCTGTCCTTATCCATGGTC
TGGGCCAACCACCTCTTCCTGGGTTGCAGTTATAATAAAGACCTTCTGGACAAGGTGATGGAAATGGCTG
ATGGGATTGAAGTGGAAGACCTGCCACAGTTTACAACCAGAAGCGAACTAATGAGAAAGCATCAAAGCTA
A

Translation (116 aa):
MVGGEASAAVEKLVSGVRQAADFAEQFRSYSESEKQWKARMEFILRHLPDYRDPPDGGGRLDQLLSLSMV
WANHLFLGCSYNKDLLDKVMEMADGIEVEDLPQFTTRSELMRKHQS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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