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Report for CCDS15013.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
15013.1 Public Mus musculus 1 Crygb 23 108 98 CCDS HistoryNCBI Gene:12965Re-query CCDS DB by CCDS ID:15013.1Re-query CCDS DB by GeneID:12965See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 15013.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000027090.8 ENSMUSP00000027090.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000027090.8Link to Ensembl Protein Viewer:ENSMUSP00000027090.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000027090Re-query CCDS DB by Protein ID:ENSMUSP00000027090
Original member Current member NCBI NM_144761.2 NP_658906.1 Accepted alive Link to Nucleotide Sequence:NM_144761.2Link to Protein Sequence:NP_658906.1Re-query CCDS DB by Nucleotide ID:NM_144761Re-query CCDS DB by Protein ID:NP_658906Link to BLAST:NP_658906.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_658906.1 175 P04344 175 100% 0 0

Chromosomal Locations for CCDS 15013.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 65080292 65080567 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 65081915 65082157 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 65082247 65082255 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (528 nt):
ATGGGAAAGATCACCTTCTTCGAGGACCGCAGCTTCCAGGGCCGCTGCTATGAGTGCAGCAGCGACTGCC
CCAACCTGCAGACCTACTTCAGCCGCTGCAATTCTGTCCGCGTGGACAGTGGCTGCTGGATGCTCTATGA
GCGCCCCAACTACCAGGGCCACCAGTACTTCCTGAGACGTGGAGAGTACCCTGACTACCAGCAGTGGATG
GGTTTCAGCGACTCCATTCGTTCCTGCTGCCTCATCCCCCAACACTCTGGCACTTACAGAATGAGGATCT
ACGAAAAAGATGACTTCAGAGGACAAATGTCAGAGATCACAGACGATTGTCTCTCTCTTCAGGATCGCTT
CCACTTCAGTGAAATCCACTCCCTCAATGTGATGGAGGGCTGCTGGGTTCTCTATGAGATGCCTAGCTAC
AGAGGACGGCAGTACCTGCTAAGGCCGGGGGAGTACAGGAGATATCTTGACTGGGGGGCTGCAAATGCCA
AAGTTGGCTCTTTTAGGCGAGTCATGGATTTTTACTGA

Translation (175 aa):
MGKITFFEDRSFQGRCYECSSDCPNLQTYFSRCNSVRVDSGCWMLYERPNYQGHQYFLRRGEYPDYQQWM
GFSDSIRSCCLIPQHSGTYRMRIYEKDDFRGQMSEITDDCLSLQDRFHFSEIHSLNVMEGCWVLYEMPSY
RGRQYLLRPGEYRRYLDWGAANAKVGSFRRVMDFY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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