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Report for CCDS34580.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
34580.1 Public Homo sapiens 7 DNAAF5 24 110 108 CCDS HistoryNCBI Gene:54919Re-query CCDS DB by CCDS ID:34580.1See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 34580.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000297440.11 ENSP00000297440.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000297440.11Link to Ensembl Protein Viewer:ENSP00000297440.6Re-query CCDS DB by Nucleotide ID:ENST00000297440Re-query CCDS DB by Protein ID:ENSP00000297440
Original member Current member NCBI NM_017802.4 NP_060272.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_017802.4Link to Protein Sequence:NP_060272.3Re-query CCDS DB by Nucleotide ID:NM_017802Re-query CCDS DB by Protein ID:NP_060272Link to BLAST:NP_060272.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_060272.3 855 Q86Y56-1 855 100% 0 0

Chromosomal Locations for CCDS 34580.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 726721 727315 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 729663 729847 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 740819 740943 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 741347 741465 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 754589 754821 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 756782 756994 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 761753 761896 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 763806 763974 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 770471 770618 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 774048 774198 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 775006 775162 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 779953 780144 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 785517 785653 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2568 nt):
ATGGCGGCGCTGGGGGTGGCGGAGGCCGTGGCGGCCCCACACCCGGCTGAGGGGGCCGAGACGGCTGAGG
CGGTGGAGCTGAGCCGCGCCCTGAGCCGCCTGCTGCCGGGGCTGGAGGCCGACAGCAAGCCGGGCCGGCG
GCGCGCCTTGGAGGCCCTGCGGCGCGCGCTGGAGGAGCCAGGCCCTGCCGCCGACCCCACCGCTTTCCAG
GGCCCCTGGGCGCGCCTACTGCTGCCGCGCTTGCTGCGCTGCCTGAGCGACCCCGCCGAGGGCTGCCGCG
CGCTGGCAGTGCACCTGCTGGATCTGGGCCTGCGCCGCGCCGCGCGGCCCCGCGATGCCCTGCCGCGCCT
GCTGCCCGCGCTCGCCGCGCGCTTGGCCGGCCCCGTGCCCGCGCGCCGCCCGCCCGAGGCCTGTGAGGAG
CTGCGCCTGGCGCTTGTGCAGCTGCTGGGCCTGGCCGTGGACCTGTGCGGCGCCGCGCTCGCGCCCCACC
TGGACGACGCTCTGCGCGCGCTGCGCTGCTCCCTGCTCGACCCCTTCGCCGCCGTGCGCCGCGAGAGCTG
CAGCTGCGCCGCCGCCCTGGCGCAGGCCACGCCCGACCACTTCCACATGCAGTCGGAGTCTCTGATCGGG
CCCCTGATGCAGACCATCTCCCACCAGCACTGGAAGGTCCGTGTGGCCGCCATTGAAGCCACAGGCGCAG
TGATCCATTTTGGCAACGGGAAGTCCGTGGACGACGTGCTTTCCCATTTTGCTCAGCGACTGTTTGATGA
CGTCCCGCAGGTCCGGCGGGCGGTGGCCTCCGTGGTGGGCGGCTGGCTGCTGTGTCTGCGTGACCGTTAC
TCCTTCTTCCACAAGCTCATCCCTCTGCTGCTCAGTAGCCTCAACGACGAGGTGCCTGAGGTCAGGCAGC
TGGCTGCCAGCCTCTGGGAGGACGTTGGCCTGCAGTGGCAGAAGGAGAATGAGGAGGACCTGAAGGACAA
GCTGGACTTTGCCCCTCCCACCCCACCCCATTACCCTCCACATGAGCGCCGCCCTGTGCTGGGCTGCCGG
GAGCTCGTCTTCAGGAACCTCTCCAAGATCCTCCCTGCCCTGTGCCACGACATCACCGACTGGGTGGTGG
GGACCCGAGTGAAGTCGGCACAGCTGCTCCCAGTGCTGCTGCTGCATGCCGAGGACCACGCCACGCAGCA
CCTGGAGGTCGTCCTCCGGACCCTGTTCCAGGCCTGCACCGACGAGGAGGCAGCCGTGGTCCAAAGTTGT
ACCAGATCCGCAGAGCTCGTCGGGACGTTTGTCAGCCCTGAGGTGTTTCTGAAGCTGATCTTATCGACGC
TGAAGAAGACGCCCTCTGCCTCCGGCCTCCTGGTGCTGGCCTCCGCCATGCGGGGTTGCCCCCGAGAAGC
CCTCCAGCCGCACCTGGCAGCCATCGCCACAGAGCTGGCACAGGCCCACATCTGCCAGGCATCTGAAAAC
GACCTCTACCTGGAGCGCCTGCTGCTGTGTGTGCAGGCTCTGGTGTCTGTGTGTCATGAGGACTGTGGCG
TGGCCAGCCTGCAGCTCTTGGACGTGCTGCTGACAATAGTGGCCCTCGCAGGTGCTACCGGCCTGAGGGA
CAAGGCACAGGAGACGATGGACTCACTGGCCATGGTGGAGGGTGTCAGCAGCTGCCAGGACCTCTACCGC
AAGCACATTGGTCCCCTCCTGGAGCGGGTGACCGCGTCGCACCTTGACTGGACCGCACACTCGCCGGAGC
TCCTGCAGTTCAGTGTCATCGTCGCACAGTCAGGCCCTGCCCTGGGAGAAGCCCTGCCACACGTCGTGCC
CACGCTGAGGGCCTGTCTGCAGCCCTCCCAAGACCCGCAGATGCGCCTGAAGCTGTTCTCCATCCTGTCC
ACCGTGCTGCTCAGAGCCACGGACACCATCAACTCCCAGGGGCAGTTTCCCAGCTACCTCGAGACGGTGA
CAAAGGACATCCTGGCCCCCAATCTGCAGTGGCATGCGGGGAGGACAGCCGCGGCCATCCGCACGGCTGC
CGTGTCCTGCCTCTGGGCGCTCACCAGCAGCGAGGTCCTGTCGGCAGAGCAGATACGGGACGTGCAGGAA
ACACTGATGCCCCAGGTCCTGACCACCCTGGAGGAGGATTCGAAGATGACGCGACTGATCTCATGCCGTA
TTATCAACACGTTCTTAAAAACCTCGGGCGGCATGACGGATCCAGAGAAACTCATCAGGATTTATCCTGA
ACTCTTAAAACGCCTAGATGACGTGTCCAACGATGTGAGGATGGCAGCCGCCTCCACCTTGGTCACCTGG
CTGCAGTGTGTCAAGGGTGCCAACGCAAAATCCTACTATCAGAGCAGTGTCCAGTACCTGTACCGAGAGT
TGCTGGTTCACCTTGACGATCCAGAGAGGGCCATCCAGGATGCAATTTTAGAGGTCCTCAAAGAGGGCAG
CGGGCTGTTCCCAGATCTCCTGGTGAGGGAGACGGAGGCCGTCATCCACAAGCACCGCTCGGCCACCTAC
TGCGAGCAGCTCCTGCAGCATGTGCAGGCCGTGCCAGCCACACAGTGA

Translation (855 aa):
MAALGVAEAVAAPHPAEGAETAEAVELSRALSRLLPGLEADSKPGRRRALEALRRALEEPGPAADPTAFQ
GPWARLLLPRLLRCLSDPAEGCRALAVHLLDLGLRRAARPRDALPRLLPALAARLAGPVPARRPPEACEE
LRLALVQLLGLAVDLCGAALAPHLDDALRALRCSLLDPFAAVRRESCSCAAALAQATPDHFHMQSESLIG
PLMQTISHQHWKVRVAAIEATGAVIHFGNGKSVDDVLSHFAQRLFDDVPQVRRAVASVVGGWLLCLRDRY
SFFHKLIPLLLSSLNDEVPEVRQLAASLWEDVGLQWQKENEEDLKDKLDFAPPTPPHYPPHERRPVLGCR
ELVFRNLSKILPALCHDITDWVVGTRVKSAQLLPVLLLHAEDHATQHLEVVLRTLFQACTDEEAAVVQSC
TRSAELVGTFVSPEVFLKLILSTLKKTPSASGLLVLASAMRGCPREALQPHLAAIATELAQAHICQASEN
DLYLERLLLCVQALVSVCHEDCGVASLQLLDVLLTIVALAGATGLRDKAQETMDSLAMVEGVSSCQDLYR
KHIGPLLERVTASHLDWTAHSPELLQFSVIVAQSGPALGEALPHVVPTLRACLQPSQDPQMRLKLFSILS
TVLLRATDTINSQGQFPSYLETVTKDILAPNLQWHAGRTAAAIRTAAVSCLWALTSSEVLSAEQIRDVQE
TLMPQVLTTLEEDSKMTRLISCRIINTFLKTSGGMTDPEKLIRIYPELLKRLDDVSNDVRMAAASTLVTW
LQCVKGANAKSYYQSSVQYLYRELLVHLDDPERAIQDAILEVLKEGSGLFPDLLVRETEAVIHKHRSATY
CEQLLQHVQAVPATQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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