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Report for CCDS72024.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
72024.1 Public Mus musculus 7 Far1 23 108 98 CCDS HistoryNCBI Gene:67420Re-query CCDS DB by CCDS ID:72024.1Re-query CCDS DB by GeneID:67420See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 16, NCBI annotation release 104, Ensembl annotation release 75

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 72024.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000067929.14 ENSMUSP00000064334.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000067929.14Link to Ensembl Protein Viewer:ENSMUSP00000064334.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000067929Re-query CCDS DB by Protein ID:ENSMUSP00000064334
Original member Current member NCBI NM_001285831.2 NP_001272760.1 Accepted alive Link to Nucleotide Sequence:NM_001285831.2Link to Protein Sequence:NP_001272760.1Re-query CCDS DB by Nucleotide ID:NM_001285831Re-query CCDS DB by Protein ID:NP_001272760Link to BLAST:NP_001272760.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001272760.1 515 Q922J9-3 515 100% 0 0

Chromosomal Locations for CCDS 72024.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 113539278 113539466 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 113540536 113540711 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 113547402 113547581 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 113549966 113550143 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 113551073 113551117 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 113551235 113551353 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 113551935 113552002 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 113554117 113554288 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 113561376 113561505 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 113566385 113566512 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 113568095 113568257 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1548 nt):
ATGGTTTCAATCCCAGAATACTACGAGGGGAAGAATATCCTTCTCACAGGAGCCACTGGTTTCTTAGGCA
AGGTGCTTCTGGAAAAGTTGCTGAGATCTTGTCCCAGGGTGAATTCTGTCTATGTTTTGGTGAGGCAAAA
AGCTGGTCAGACACCCCAAGAGCGAGTGGAGGAAATCCTCAGTAGCAAGCTTTTCGACAGGTTGAGAGAT
GAAAATCCAGATTTTAGAGAGAAAATTATAGCGATCAACAGTGAACTTACCCAACCTAAACTGGCTCTCA
GTGAAGAAGATAAGGAGATCATTATAGATTCTACAAATGTCATATTCCACTGTGCGGCTACTGTAAGATT
TAATGAAAATTTAAGAGATGCTGTCCAGTTAAATGTGATAGCTACACGACAGCTTATTCTCCTTGCACAG
CAAATGAAGAATCTGGAAGTGTTCATGCATGTCTCAACAGCGTATGCCTACTGCAATCGAAAGCATATTG
ATGAAGTAGTTTATCCACCCCCTGTAGATCCCAAGAAGCTGATTGATTCTTTAGAATGGATGGATGATGG
CCTAGTAAATGATATCACACCAAAATTGATAGGCGACAGGCCTAACACGTACATATACACCAAGGCATTG
GCAGAGTATGTTGTGCAGCAGGAAGGAGCAAAGCTAAATGTTGCCATTGTAAGGCCGTCGATCGTCGGCG
CCAGTTGGAAAGAACCTTTTCCAGGATGGATTGATAACTTTAATGGACCAAGTGGTCTCTTCATTGCGGC
AGGGAAAGGAATTCTTCGAACAATGCGTGCCTCCAACAATGCCCTTGCAGATCTCGTTCCTGTAGATGTA
GTGGTCAACACGAGCCTTGCTGCAGCCTGGTATTCTGGAGTTAATAGACCAAGAAACATCATGGTGTATA
ATTGCACAACAGGCAGCACTAATCCTTTCCACTGGGGGGAAGTTGGAGATTATCTAAATCATTCCTTCAA
GATGAATCCTTTAAACCAAGTATTCAGGCACCCCTATGTTAAATTCTGTTCCAACAACCTAATGCTTCAT
TATTGGAAGGGTGTCAAACATACAGTACCTGCATTATTGCTCGATCTTGCTCTCAGGTTGACAGGTCAGA
AACCGTGGATGATGAAAACAATCACTCGTCTTCACAAAGCCATGGTATTCCTTGAGTATTTTACAAGTAA
CTCTTGGGTTTGGAATACTGATAATGTCAATATGTTAATGAACCAACTAAACCCTGAAGATAAAAAGACC
TTTAATATTGATGTACGGCAGTTACATTGGGCAGAATATATAGAAAACTACTGCATGGGGACTAAGAAGT
ACGTGTTGAATGAAGAGATGTCTGGCCTCCCTGCTGCTCGGAAGCATCTCAACAAGTTGCGGAATATCCG
TTATGGTTTCAATACAATCCTTGTGATACTTATCTGGCGCATTTTTATTGCAAGATCACAAATGGCAAGA
AACATCTGGTATTTTGTGGTTAGTCTGTGTTACAAATTTCTGTCATACTTCCGAGCATCCAGCACTATGA
GATACTGA

Translation (515 aa):
MVSIPEYYEGKNILLTGATGFLGKVLLEKLLRSCPRVNSVYVLVRQKAGQTPQERVEEILSSKLFDRLRD
ENPDFREKIIAINSELTQPKLALSEEDKEIIIDSTNVIFHCAATVRFNENLRDAVQLNVIATRQLILLAQ
QMKNLEVFMHVSTAYAYCNRKHIDEVVYPPPVDPKKLIDSLEWMDDGLVNDITPKLIGDRPNTYIYTKAL
AEYVVQQEGAKLNVAIVRPSIVGASWKEPFPGWIDNFNGPSGLFIAAGKGILRTMRASNNALADLVPVDV
VVNTSLAAAWYSGVNRPRNIMVYNCTTGSTNPFHWGEVGDYLNHSFKMNPLNQVFRHPYVKFCSNNLMLH
YWKGVKHTVPALLLDLALRLTGQKPWMMKTITRLHKAMVFLEYFTSNSWVWNTDNVNMLMNQLNPEDKKT
FNIDVRQLHWAEYIENYCMGTKKYVLNEEMSGLPAARKHLNKLRNIRYGFNTILVILIWRIFIARSQMAR
NIWYFVVSLCYKFLSYFRASSTMRY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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