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Report for CCDS42036.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
42036.1 Public Homo sapiens 15 MYO5C 24 110 108 CCDS HistoryNCBI Gene:55930Re-query CCDS DB by CCDS ID:42036.1See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 42036.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000261839.12 ENSP00000261839.7 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000261839.12Link to Ensembl Protein Viewer:ENSP00000261839.7Re-query CCDS DB by Nucleotide ID:ENST00000261839Re-query CCDS DB by Protein ID:ENSP00000261839
Original member Current member NCBI NM_018728.4 NP_061198.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_018728.4Link to Protein Sequence:NP_061198.2Re-query CCDS DB by Nucleotide ID:NM_018728Re-query CCDS DB by Protein ID:NP_061198Link to BLAST:NP_061198.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_061198.2 1742 Q9NQX4-1 1742 100% 0 0

Chromosomal Locations for CCDS 42036.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 52193902 52194054 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 52195377 52195457 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 52196309 52196483 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 52204865 52205147 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 52205816 52205966 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 52208554 52208643 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 52211730 52211884 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 52213188 52213286 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 52214603 52214690 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 52218519 52218687 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 52219759 52219822 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 52221162 52221255 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 52223544 52223724 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 52224901 52224981 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 52225075 52225138 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 52225439 52225532 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 52229133 52229313 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 52232622 52232685 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 52235670 52235763 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 52237482 52237646 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 52239733 52239879 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 52242048 52242213 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 52244356 52244567 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 52245354 52245465 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 52245956 52246042 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 52246917 52247014 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 52247458 52247592 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 52248700 52248783 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 52251390 52251515 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 52253317 52253457 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 52256639 52256720 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 52260862 52261127 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 52264190 52264296 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 52269753 52269860 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 52271763 52271844 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 52272580 52272723 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 52275562 52275718 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 52278873 52279017 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 52279509 52279674 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 52282782 52282892 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 52295610 52295636 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (5229 nt):
ATGGCGGTGGCCGAGCTGTACACGCAGTACAACAGGGTCTGGATTCCCGATCCTGAAGAAGTTTGGAAGT
CTGCTGAAATAGCCAAGGACTACAGAGTTGGTGACAAGGTCCTGCGACTCCTGCTGGAGGATGGAACGGA
GCTGGATTATTCTGTCAATCCAGAATCTCTGCCTCCACTTCGGAATCCTGACATCCTCGTGGGCGAGAAT
GACCTCACGGCTCTCAGCTATCTTCACGAGCCCGCGGTGCTCCACAACCTCAGAATCCGCTTTGCAGAAT
CCAAACTCATTTACACCTACAGTGGAATCATTTTGGTGGCCATGAATCCTTACAAGCAGTTGCCAATATA
CGGAGATGCCATCATCCACGCCTACAGCGGGCAGAACATGGGCGATATGGACCCACACATATTTGCCGTG
GCAGAAGAGGCATACAAGCAGATGGCCAGAAACAACAGAAACCAGTCCATAATTGTAAGTGGGGAGTCAG
GTGCTGGAAAGACAGTGTCGGCTCGCTATGCCATGAGGTACTTTGCCACCGTCAGCAAATCGGGCAGCAA
CGCTCACGTGGAAGACAAGGTCCTGGCATCCAATCCCATCACCGAGGCCGTTGGAAATGCCAAGACCACC
CGCAATGACAATAGTAGTCGGTTTGGGAAATACACAGAAATCAGTTTTGATGAACAAAATCAAATTATAG
GAGCCAACATGAGCACTTACCTCCTGGAGAAATCCAGAGTTGTCTTTCAATCGGAAAATGAACGAAATTA
CCACATTTTCTATCAGCTTTGTGCATCTGCACAGCAGTCGGAATTTAAACATCTTAAATTGGGGAGTGCC
GAAGAATTTAATTATACAAGAATGGGAGGCAATACTGTCATTGAGGGTGTGAATGATCGAGCTGAAATGG
TAGAGACTCAAAAGACCTTCACGCTTCTGGGTTTCAAGGAGGATTTTCAGATGGACGTTTTTAAAATCCT
GGCAGCCATCCTACATCTGGGCAATGTGCAGATCACCGCGGTGGGCAACGAGAGGTCCTCAGTTAGTGAG
GATGACAGTCACCTGAAGGTGTTCTGTGAGCTCCTGGGCCTGGAGAGTGGCAGAGTTGCTCAGTGGCTGT
GCAATCGCAAAATCGTCACAAGCTCTGAGACGGTGGTAAAACCCATGACCAGGCCTCAGGCTGTCAACGC
CAGGGATGCACTGGCCAAAAAGATCTATGCTCACCTGTTCGACTTCATTGTGGAGAGAATTAACCAAGCG
TTGCAGTTTTCAGGCAAGCAGCACACTTTTATTGGTGTTTTGGACATTTATGGTTTTGAAACCTTTGATG
TGAACAGCTTTGAACAATTTTGCATCAATTACGCTAATGAAAAACTGCAACAACAGTTTAACATGCATGT
CTTCAAACTGGAACAAGAAGAATACATGAAGGAAGATATACCTTGGACGCTGATAGATTTTTATGACAAT
CAACCAGTTATTGACCTGATTGAAGCAAAAATGGGAATTCTGGAGTTACTGGATGAAGAATGTTTGTTAC
CACATGGAACTGATGAAAACTGGCTTCAAAAGCTGTATAATAATTTTGTCAACAGGAACCCTTTGTTTGA
AAAGCCTAGAATGTCAAACACATCCTTTGTCATCCAGCACTTTGCTGATAAGGTAGAGTATAAATGTGAA
GGTTTCCTGGAGAAAAACAGAGACACCGTCTATGACATGCTGGTTGAAATCCTGAGAGCAAGCAAGTTTC
ATCTCTGTGCCAACTTTTTTCAAGAAAATCCAACTCCTCCTTCTCCTTTTGGTTCAATGATTACAGTTAA
ATCTGCAAAGCAAGTCATCAAGCCAAACAGCAAGCATTTCCGGACCACAGTTGGGAGCAAGTTCCGCAGC
TCTCTGTACTTGCTCATGGAGACCCTCAATGCGACGACGCCCCACTACGTTCGATGCATCAAGCCAAATG
ATGAGAAGTTACCCTTTGAATTTGACTCCAAAAGAATTGTTCAGCAGCTGCGAGCCTGCGGCGTTTTAGA
AACGATTCGCATTAGTGCACAGAGCTACCCTTCCAGGTGGACATACATCGAGTTCTACAGTCGCTACGGC
ATTCTCATGACCAAGCAAGAGCTTTCCTTCAGCGATAAAAAGGAGGTGTGCAAGGTGGTTTTACACAGAC
TCATCCAGGATTCTAATCAGTACCAGTTTGGTAAAACCAAAATTTTCTTCAGAGCAGGACAAGTGGCTTA
TTTAGAGAAACTTCGATTGGATAAACTGAGGCAGAGTTGTGTTATGGTACAAAAGCACATGCGTGGCTGG
CTCCAGAGGAAAAAATTCCTCCGAGAGAGACGAGCCGCCCTGATAATCCAGCAGTACTTCCGGGGTCAGC
AAACTGTGAGGAAAGCTATTACTGCAGTGGCCTTAAAAGAAGCTTGGGCAGCCATAATCATTCAGAAGCA
CTGCCGCGGGTATCTTGTTCGCAGCCTGTATCAGTTGATTCGCATGGCCACCATCACAATGCAGGCCTAC
AGCCGAGGATTCCTGGCAAGGAGGAGGTATCGAAAGATGCTGGAGGAACATAAGGCTGTGATCCTACAGA
AATACGCACGGGCGTGGCTGGCCAGACGCAGATTCCAGAGTATCCGACGATTCGTGCTTAATATTCAGCT
TACTTACAGGGTCCAGCGTTTGCAGAAAAAGTTGGAAGATCAGAACAAAGAAAACCATGGGCTGGTGGAG
AAGCTGACTAGCCTGGCTGCTCTTCGAGCTGGGGATGTGGAAAAGATTCAGAAGCTGGAAGCAGAACTAG
AAAAAGCAGCCACTCACAGGCGAAATTACGAGGAGAAGGGGAAGAGATACAGGGATGCTGTGGAAGAGAA
ATTGGCAAAGCTTCAGAAGCATAATTCAGAACTGGAAACACAGAAAGAACAAATACAGCTGAAGCTTCAA
GAGAAGACTGAAGAGTTAAAAGAAAAAATGGACAACCTCACCAAGCAGCTCTTTGATGATGTACAAAAGG
AAGAACGGCAAAGAATGCTTCTTGAAAAAAGTTTTGAACTGAAAACACAAGACTATGAGAAGCAGATTCA
GTCTTTGAAAGAAGAAATTAAAGCTCTCAAGGATGAGAAGATGCAACTCCAACACCTGGTGGAGGGGGAG
CACGTCACTTCTGATGGCTTGAAGGCGGAAGTGGCCCGCCTGAGCAAGCAGGTCAAGACAATCTCTGAGT
TCGAAAAAGAGATAGAACTACTTCAGGCACAGAAGATAGATGTGGAGAAACATGTGCAGTCACAAAAACG
GGAAATGAGAGAAAAGATGTCAGAGATCACCAAACAACTTCTCGAAAGCTATGACATTGAAGATGTAAGA
AGCAGGCTCTCTGTGGAAGATCTGGAACATTTAAATGAGGATGGAGAACTTTGGTTTGCTTATGAAGGAC
TAAAGAAAGCAACACGTGTTTTGGAGAGCCATTTCCAGTCTCAGAAGGATTGCTATGAAAAGGAGATTGA
AGCTTTGAACTTCAAAGTGGTGCATCTCAGTCAAGAAATCAACCACCTGCAGAAGTTATTCAGAGAAGAA
AATGACATCAATGAAAGCATCCGTCATGAAGTTACCAGGCTAACATCAGAGAACATGATGATCCCAGACT
TTAAACAGCAAATTTCAGAATTGGAGAAACAGAAGCAAGATCTTGAAATCCGCCTGAATGAACAAGCTGA
GAAAATGAAAGGAAAACTAGAAGAATTGTCTAATCAGTTACATCGCAGTCAAGAGGAGGAAGGAACACAA
AGAAAGGCCTTGGAAGCCCAAAATGAAATACATACCAAAGAGAAGGAGAAGCTGATTGATAAGATTCAAG
AAATGCAGGAGGCCAGTGACCACTTGAAGAAACAATTTGAAACTGAAAGTGAAGTCAAGTGTAACTTCCG
GCAGGAAGCATCCCGGCTCACTTTGGAAAACAGGGATCTTGAAGAAGAATTAGACATGAAAGACAGAGTG
ATTAAAAAGCTACAAGATCAAGTCAAGACACTAAGCAAGACAATTGGAAAAGCCAATGATGTGCACTCGT
CCTCAGGACCCAAGGAGTACCTTGGAATGCTGCAATACAAGAGAGAAGACGAGGCCAAGCTCATTCAGAA
CCTCATTCTTGACTTGAAGCCCCGTGGCGTGGTGGTGAACATGATCCCCGGGCTGCCGGCTCATATCCTG
TTCATGTGTGTGCGCTACGCAGACTCTCTGAATGATGCCAACATGCTGAAGTCCCTCATGAACAGCACCA
TTAATGGCATCAAGCAGGTGGTTAAGGAACATTTAGAAGACTTTGAAATGCTGTCCTTTTGGCTTTCCAA
CACTTGTCATTTTCTCAATTGCCTGAAGCAGTACAGCGGAGAAGAGGAATTCATGAAGCATAATAGTCCA
CAGCAGAATAAGAATTGCTTGAACAATTTTGACCTTTCAGAATACAGACAGATTCTCAGTGATGTGGCTA
TACGAATATATCATCAATTTATTATCATAATGGAAAAGAATATCCAACCGATAATAGTTCCGGGAATGCT
GGAGTATGAGAGCCTGCAGGGCATTTCCGGCCTGAAGCCCACAGGCTTCCGGAAGCGCTCCTCTAGCATA
GACGACACGGACGGCTACACCATGACCTCCGTCCTGCAACAGCTGAGCTACTTTTACACCACCATGTGCC
AGAACGGCCTGGACCCCGAGCTTGTGAGGCAGGCGGTGAAGCAGCTCTTCTTCTTGATCGGGGCGGTCAC
GCTGAACAGCCTCTTCCTGCGCAAGGACATGTGCTCCTGCAGAAAAGGGATGCAGATCAGGTGCAATATC
AGCTACTTAGAAGAATGGCTTAAAGATAAGAACTTGCAGAACAGCTTAGCAAAGGAAACTTTGGAGCCCC
TCTCTCAGGCAGCCTGGTTGCTTCAGGTCAAGAAGACCACAGACAGTGATGCCAAGGAGATCTACGAACG
CTGCACCTCACTGTCTGCTGTGCAGATCATAAAGATCCTTAATTCATACACACCTATAGATGACTTTGAG
AAGAGAGTGACTCCATCCTTTGTTCGCAAAGTACAGGCTCTCCTAAATAGCCGGGAGGATTCATCACAGC
TGATGTTGGATACCAAATATCTCTTTCAAGTCACATTTCCTTTTACCCCCTCTCCACATGCTCTGGAAAT
GATTCAGATCCCCAGCAGTTTCAAGCTAGGCTTTCTGAATAGGTTATAG

Translation (1742 aa):
MAVAELYTQYNRVWIPDPEEVWKSAEIAKDYRVGDKVLRLLLEDGTELDYSVNPESLPPLRNPDILVGEN
DLTALSYLHEPAVLHNLRIRFAESKLIYTYSGIILVAMNPYKQLPIYGDAIIHAYSGQNMGDMDPHIFAV
AEEAYKQMARNNRNQSIIVSGESGAGKTVSARYAMRYFATVSKSGSNAHVEDKVLASNPITEAVGNAKTT
RNDNSSRFGKYTEISFDEQNQIIGANMSTYLLEKSRVVFQSENERNYHIFYQLCASAQQSEFKHLKLGSA
EEFNYTRMGGNTVIEGVNDRAEMVETQKTFTLLGFKEDFQMDVFKILAAILHLGNVQITAVGNERSSVSE
DDSHLKVFCELLGLESGRVAQWLCNRKIVTSSETVVKPMTRPQAVNARDALAKKIYAHLFDFIVERINQA
LQFSGKQHTFIGVLDIYGFETFDVNSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKEDIPWTLIDFYDN
QPVIDLIEAKMGILELLDEECLLPHGTDENWLQKLYNNFVNRNPLFEKPRMSNTSFVIQHFADKVEYKCE
GFLEKNRDTVYDMLVEILRASKFHLCANFFQENPTPPSPFGSMITVKSAKQVIKPNSKHFRTTVGSKFRS
SLYLLMETLNATTPHYVRCIKPNDEKLPFEFDSKRIVQQLRACGVLETIRISAQSYPSRWTYIEFYSRYG
ILMTKQELSFSDKKEVCKVVLHRLIQDSNQYQFGKTKIFFRAGQVAYLEKLRLDKLRQSCVMVQKHMRGW
LQRKKFLRERRAALIIQQYFRGQQTVRKAITAVALKEAWAAIIIQKHCRGYLVRSLYQLIRMATITMQAY
SRGFLARRRYRKMLEEHKAVILQKYARAWLARRRFQSIRRFVLNIQLTYRVQRLQKKLEDQNKENHGLVE
KLTSLAALRAGDVEKIQKLEAELEKAATHRRNYEEKGKRYRDAVEEKLAKLQKHNSELETQKEQIQLKLQ
EKTEELKEKMDNLTKQLFDDVQKEERQRMLLEKSFELKTQDYEKQIQSLKEEIKALKDEKMQLQHLVEGE
HVTSDGLKAEVARLSKQVKTISEFEKEIELLQAQKIDVEKHVQSQKREMREKMSEITKQLLESYDIEDVR
SRLSVEDLEHLNEDGELWFAYEGLKKATRVLESHFQSQKDCYEKEIEALNFKVVHLSQEINHLQKLFREE
NDINESIRHEVTRLTSENMMIPDFKQQISELEKQKQDLEIRLNEQAEKMKGKLEELSNQLHRSQEEEGTQ
RKALEAQNEIHTKEKEKLIDKIQEMQEASDHLKKQFETESEVKCNFRQEASRLTLENRDLEEELDMKDRV
IKKLQDQVKTLSKTIGKANDVHSSSGPKEYLGMLQYKREDEAKLIQNLILDLKPRGVVVNMIPGLPAHIL
FMCVRYADSLNDANMLKSLMNSTINGIKQVVKEHLEDFEMLSFWLSNTCHFLNCLKQYSGEEEFMKHNSP
QQNKNCLNNFDLSEYRQILSDVAIRIYHQFIIIMEKNIQPIIVPGMLEYESLQGISGLKPTGFRKRSSSI
DDTDGYTMTSVLQQLSYFYTTMCQNGLDPELVRQAVKQLFFLIGAVTLNSLFLRKDMCSCRKGMQIRCNI
SYLEEWLKDKNLQNSLAKETLEPLSQAAWLLQVKKTTDSDAKEIYERCTSLSAVQIIKILNSYTPIDDFE
KRVTPSFVRKVQALLNSREDSSQLMLDTKYLFQVTFPFTPSPHALEMIQIPSSFKLGFLNRL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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