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Report for CCDS20334.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
20334.1 Public Mus musculus 6 Dnajb8 23 108 98 CCDS HistoryNCBI Gene:56691Re-query CCDS DB by CCDS ID:20334.1See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 20334.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000061866.5 ENSMUSP00000056592.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000061866.5Link to Ensembl Protein Viewer:ENSMUSP00000056592.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000061866Re-query CCDS DB by Protein ID:ENSMUSP00000056592
Original member Current member NCBI NM_019964.1 NP_064348.1 Accepted alive Link to Nucleotide Sequence:NM_019964.1Link to Protein Sequence:NP_064348.1Re-query CCDS DB by Nucleotide ID:NM_019964Re-query CCDS DB by Protein ID:NP_064348Link to BLAST:NP_064348.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_064348.1 227 Q9QYI7 227 100% 0 0

Chromosomal Locations for CCDS 20334.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 6 (NC_000072.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 88222484 88223167 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (684 nt):
ATGGCCAACTACTATGAAGTGCTGGGTGTACAATCAAGCGCCTCCCCTGAGGACATCAAGAAGGCCTATC
GA
AAGCTGGCTTTGCGTTGGCACCCTGACAAGAACCCCGACAACAAAGAAGAAGCTGAGAAGAAGTTTAA
G
CAGGTTTCCGAAGCCTACGAAGTCTTGTCAGACTCTAAGAAGCGTTCTGTGTACGACCGGGCAGGCTGT
GAC
AGATGGAGAGCAGGTGGCGGTGCCAATGTCCCCCATAGCAGTCCCTTCGGTGCTGGCTATCCCTTCC
GA
AATCCTGAGGATATTTTCCGCGAGTTCTTTGGGGGACTGGACCCTTTTTCCTTTGAATTCTGGGACAC
T
CCGTTCAGCGGCCGAGGCCGGCCCCATGGTTTACACAGAGTCTTCCCTTCGGGCTTTGGTGAGTTCCCA
GCC
TTCATGGAAGCCTTGTCATCTTTCAATACTCTGGGCCATGGTGGGGGCAGCCGCTCCACCTTTTCAT
CT
GCTTCGTTTGGTGGCTCTGGCAGCTCAGGGTTCAAGTCAGTGATGTCATCGACTGAGATGGTGAACGG
C
CGTAAGGTGACCACCAAGCGAATCATTGAGAACGGCCAAGAGCGGGTGGAGGTGGAAGAAGATGGACAG
CTC
CGGTCAGTAACTGTCAATGGCAAGGAGAAGCTCATGAGGGTGGACAAGTGA


Translation (227 aa):
MANYYEVLGVQSSASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKQVSEAYEVLSDSKKRSVYDRAGC
D
RWRAGGGANVPHSSPFGAGYPFRNPEDIFREFFGGLDPFSFEFWDTPFSGRGRPHGLHRVFPSGFGEFP
A
FMEALSSFNTLGHGGGSRSTFSSASFGGSGSSGFKSVMSSTEMVNGRKVTTKRIIENGQERVEVEEDGQ
L
RSVTVNGKEKLMRVDK




Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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