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Report for CCDS12771.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12771.1 Public Homo sapiens 19 RCN3 24 110 108 CCDS HistoryNCBI Gene:57333Re-query CCDS DB by CCDS ID:12771.1See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12771.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000270645.8 ENSP00000270645.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000270645.8Link to Ensembl Protein Viewer:ENSP00000270645.2Re-query CCDS DB by Nucleotide ID:ENST00000270645Re-query CCDS DB by Protein ID:ENSP00000270645
Original member Current member NCBI NM_020650.3 NP_065701.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_020650.3Link to Protein Sequence:NP_065701.2Re-query CCDS DB by Nucleotide ID:NM_020650Re-query CCDS DB by Protein ID:NP_065701Link to BLAST:NP_065701.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_065701.2 328 Q96D15 328 100% 0 0

Chromosomal Locations for CCDS 12771.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 49528473 49528714 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 49534193 49534395 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 49537033 49537205 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 49539119 49539179 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 49542553 49542752 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 49543106 49543213 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (987 nt):
ATGATGTGGCGACCATCAGTTCTGCTGCTTCTGTTGCTACTGAGGCACGGGGCCCAGGGGAAGCCATCCC
CAGACGCAGGCCCTCATGGCCAGGGGAGGGTGCACCAGGCGGCCCCCCTGAGCGACGCTCCCCATGATGA
CGCCCACGGGAACTTCCAGTACGACCATGAGGCTTTCCTGGGACGGGAAGTGGCCAAGGAATTCGACCAA
CTCACCCCAGAGGAAAGCCAGGCCCGTCTGGGGCGGATCGTGGACCGCATGGACCGCGCGGGGGACGGCG
ACGGCTGGGTGTCGCTGGCCGAGCTTCGCGCGTGGATCGCGCACACGCAGCAGCGGCACATACGGGACTC
GGTGAGCGCGGCCTGGGACACGTACGACACGGACCGCGACGGGCGTGTGGGTTGGGAGGAGCTGCGCAAC
GCCACCTATGGCCACTACGCGCCCGGTGAAGAATTTCATGACGTGGAGGATGCAGAGACCTACAAAAAGA
TGCTGGCTCGGGACGAGCGGCGTTTCCGGGTGGCCGACCAGGATGGGGACTCGATGGCCACTCGAGAGGA
GCTGACAGCCTTCCTGCACCCCGAGGAGTTCCCTCACATGCGGGACATCGTGATTGCTGAAACCCTGGAG
GACCTGGACAGAAACAAAGATGGCTATGTCCAGGTGGAGGAGTACATCGCGGATCTGTACTCAGCCGAGC
CTGGGGAGGAGGAGCCGGCGTGGGTGCAGACGGAGAGGCAGCAGTTCCGGGACTTCCGGGATCTGAACAA
GGATGGGCACCTGGATGGGAGTGAGGTGGGCCACTGGGTGCTGCCCCCTGCCCAGGACCAGCCCCTGGTG
GAAGCCAACCACCTGCTGCACGAGAGCGACACGGACAAGGATGGGCGGCTGAGCAAAGCGGAAATCCTGG
GTAATTGGAACATGTTTGTGGGCAGTCAGGCCACCAACTATGGCGAGGACCTGACCCGGCACCACGATGA
GCTGTGA

Translation (328 aa):
MMWRPSVLLLLLLLRHGAQGKPSPDAGPHGQGRVHQAAPLSDAPHDDAHGNFQYDHEAFLGREVAKEFDQ
LTPEESQARLGRIVDRMDRAGDGDGWVSLAELRAWIAHTQQRHIRDSVSAAWDTYDTDRDGRVGWEELRN
ATYGHYAPGEEFHDVEDAETYKKMLARDERRFRVADQDGDSMATREELTAFLHPEEFPHMRDIVIAETLE
DLDRNKDGYVQVEEYIADLYSAEPGEEEPAWVQTERQQFRDFRDLNKDGHLDGSEVGHWVLPPAQDQPLV
EANHLLHESDTDKDGRLSKAEILGNWNMFVGSQATNYGEDLTRHHDEL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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