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Report for CCDS13548.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
13548.1 Public Homo sapiens 20 ZNF512B 24 110 108 CCDS HistoryNCBI Gene:57473Re-query CCDS DB by CCDS ID:13548.1See the combined annotation on chromosome 20 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 13548.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000369888.6 ENSP00000358904.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000369888.6Link to Ensembl Protein Viewer:ENSP00000358904.1Re-query CCDS DB by Nucleotide ID:ENST00000369888Re-query CCDS DB by Protein ID:ENSP00000358904
Original member Current member NCBI NM_020713.3 NP_065764.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_020713.3Link to Protein Sequence:NP_065764.1Re-query CCDS DB by Nucleotide ID:NM_020713Re-query CCDS DB by Protein ID:NP_065764Link to BLAST:NP_065764.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_065764.1 892 Q96KM6 892 100% 0 0

Chromosomal Locations for CCDS 13548.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 20 (NC_000020.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20See the combined annotation on chromosome 20 in Sequence Viewer

Chromosome Start Stop Links
20 63959888 63960139 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 63961309 63961407 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 63961942 63962004 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 63962273 63962374 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 63962587 63962781 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 63963095 63963265 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 63963342 63963440 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 63963618 63963710 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 63963789 63963913 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 63964071 63964217 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 63964320 63964391 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 63964490 63964716 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 63966141 63966781 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 63966876 63967004 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 63967381 63967523 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 63967830 63967950 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2679 nt):
ATGACGGATCCTTTCTGCGTTGGAGGCCGTCGGCTCCCGGGGTCCAGCAAGAGTGGTCCCGGGAAGGATG
GCAGCCGAAAGGAGGTCCGACTTCCAATGCTGCATGACCCACCGAAGATGGGGATGCCGGTGGTCCGTGG
TGGACAGACAGTGCCCGGCCAGGCCCCTCTCTGCTTTGACCCGGGAAGTCCAGCCAGTGACAAGACAGAA
GGGAAGAAAAAGGGGCGGCCAAAAGCCGAGAACCAGGCCCTCCGAGACATTCCTCTCTCCCTGATGAACG
ACTGGAAGGATGAGTTCAAGGCACACTCGAGGGTGAAGTGTCCAAACTCAGGGTGCTGGCTGGAGTTCCC
CAGCATCTACGGGCTCAAGTACCATTACCAGCGGTGCCAAGGGGGTGCCATCTCAGATCGCCTGGCCTTC
CCCTGCCCCTTCTGCGAGGCCGCATTCACCTCTAAGACCCAGCTGGAGAAACACCGGATCTGGAACCACA
TGGACCGACCCCTGCCTGCCTCCAAGCCTGGGCCCATCAGCAGGCCGGTCACCATCAGCCGGCCTGTTGG
GGTCAGCAAGCCCATCGGAGTGAGCAAACCTGTCACTATTGGCAAACCTGTGGGTGTCAGCAAACCCATT
GGCATCAGCAAGCCAGTCTCGGTCGGCAGACCCATGCCAGTCACCAAGGCCATCCCGGTCACTAGGCCCG
TGCCAGTCACCAAACCTGTCACAGTCAGCAGGCCCATGCCCGTCACCAAGGCCATGCCGGTCACCAAACC
CATCACAGTCACCAAGTCTGTGCCGGTCACCAAACCCGTACCTGTCACCAAACCCATTACGGTAACAAAG
CTTGTGACAGTTACGAAACCCGTGCCGGTCACCAAGCCAGTGACAGTCAGCAGGCCCATTGTGGTCAGCA
AGCCGGTGACAGTCAGCAGGCCCATTGCTATCAGCAGACACACACCGCCCTGCAAAATGGTGCTGCTGAC
CAGGTCGGAGAACAAAGCACCTCGTGCCACAGGGAGGAACAGTGGTAAGAAAAGGGCTGCGGACAGCCTG
GACACCTGCCCAATTCCACCCAAGCAGGCCAGGCCAGAGAATGGGGAGTACGGCCCCTCCTCCATGGGCC
AGAGCTCGGCCTTCCAGCTGAGTGCAGACACCAGCAGTGGCTCCTTGTCGCCAGGCAGCAGGCCGTCAGG
GGGCATGGAGGCACTGAAGGCTGCAGGCCCTGCGTCCCCGCCTGAGGAGGACCCGGAGCGCACAAAGCAC
AGAAGGAAACAGAAAACACCCAAAAAGTTTACAGGGGAGCAGCCATCCATCTCAGGGACCTTTGGGCTCA
AAGGCCTGGTCAAAGCTGAGGACAAGGCCCGAGTTCACCGCTCCAAGAAGCAGGAGGGGCCAGGCCCTGA
GGACGCCCGGAAGAAGGTGCCAGCTGCCCCCATCACTGTCAGCAAGGAGGCACCGGCCCCTGTGGCCCAC
CCAGCTCCAGGTGGCCCTGAAGAGCAGTGGCAGAGGGCCATCCATGAGCGCGGGGAAGCCGTCTGCCCCA
CCTGCAACGTGGTCACCCGGAAGACTCTCGTGGGGCTTAAGAAGCACATGGAGGTGTGTCAGAAGCTTCA
GGATGCACTCAAGTGCCAGCACTGCCGGAAGCAGTTCAAGTCCAAAGCCGGCCTCAACTACCACACTATG
GCCGAGCACAGTGCCAAGCCCTCTGACGCCGAGGCCTCCGAAGGGGGCGAGCAGGAGGAGCGCGAGAGGC
TGCGCAAGGTGCTGAAGCAGATGGGACGGCTGCGCTGCCCCCAGGAGGGTTGCGGGGCTGCCTTCTCCAG
CCTCATGGGCTACCAGTACCACCAGCGGCGCTGCGGGAAGCCGCCCTGCGAGGTGGACAGCCCCTCCTTC
CCCTGCACCCACTGTGGCAAGACGTACCGATCCAAGGCTGGCCACGACTACCACGTGCGCTCGGAGCACA
CGGCCCCCCCCCCTGAGGAGCCCACAGACAAGTCCCCTGAGGCTGAGGACCCGCTGGGTGTGGAGCGGAC
CCCAAGCGGGCGTGTCCGCCGCACGTCGGCCCAGGTGGCGGTGTTCCACCTGCAGGAGATAGCGGAGGAC
GAGCTGGCCCGCGACTGGACCAAGCGGCGCATGAAGGATGACCTTGTGCCCGAGACCGCACGGCTCAACT
ACACTCGACCAGGGCTCCCCACGCTGAACCCCCAGCTGCTAGAGGCATGGAAGAATGAAGTGAAGGAGAA
AGGCCACGTCAACTGTCCCAACGACTGCTGTGAAGCCATCTACTCCAGCGTGTCCGGACTCAAGGCTCAT
CTCGCCAGCTGCAGTAAGGGGGCCCACCTGGCAGGGAAGTACCGCTGTCTGCTGTGTCCGAAGGAGTTCA
GTTCTGAGAGTGGCGTCAAATACCACATCCTGAAGACCCACGCAGAGAACTGGTTCCGAACATCAGCAGA
CCCACCTCCCAAACACAGGAGCCAGGACTCATTGGTGCCCAAGAAGGAAAAGAAGAAAAATCTGGCAGGT
GGAAAGAAGCGGGGCCGAAAGCCCAAGGAGCGGACCCCAGAGGAGCCTGTGGCCAAGCTGCCCCCGCGCC
GGGACGACTGGCCTCCAGGATGCAGAGACAAGGGGGCCCGGGGCTCCACCGGCCGGAAGGTGGGAGTCAG
CAAGGCGCCTGAAAAGTGA

Translation (892 aa):
MTDPFCVGGRRLPGSSKSGPGKDGSRKEVRLPMLHDPPKMGMPVVRGGQTVPGQAPLCFDPGSPASDKTE
GKKKGRPKAENQALRDIPLSLMNDWKDEFKAHSRVKCPNSGCWLEFPSIYGLKYHYQRCQGGAISDRLAF
PCPFCEAAFTSKTQLEKHRIWNHMDRPLPASKPGPISRPVTISRPVGVSKPIGVSKPVTIGKPVGVSKPI
GISKPVSVGRPMPVTKAIPVTRPVPVTKPVTVSRPMPVTKAMPVTKPITVTKSVPVTKPVPVTKPITVTK
LVTVTKPVPVTKPVTVSRPIVVSKPVTVSRPIAISRHTPPCKMVLLTRSENKAPRATGRNSGKKRAADSL
DTCPIPPKQARPENGEYGPSSMGQSSAFQLSADTSSGSLSPGSRPSGGMEALKAAGPASPPEEDPERTKH
RRKQKTPKKFTGEQPSISGTFGLKGLVKAEDKARVHRSKKQEGPGPEDARKKVPAAPITVSKEAPAPVAH
PAPGGPEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTM
AEHSAKPSDAEASEGGEQEERERLRKVLKQMGRLRCPQEGCGAAFSSLMGYQYHQRRCGKPPCEVDSPSF
PCTHCGKTYRSKAGHDYHVRSEHTAPPPEEPTDKSPEAEDPLGVERTPSGRVRRTSAQVAVFHLQEIAED
ELARDWTKRRMKDDLVPETARLNYTRPGLPTLNPQLLEAWKNEVKEKGHVNCPNDCCEAIYSSVSGLKAH
LASCSKGAHLAGKYRCLLCPKEFSSESGVKYHILKTHAENWFRTSADPPPKHRSQDSLVPKKEKKKNLAG
GKKRGRKPKERTPEEPVAKLPPRRDDWPPGCRDKGARGSTGRKVGVSKAPEK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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