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Report for CCDS45090.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
45090.1 Public Homo sapiens 14 NYNRIN 24 110 108 CCDS HistoryNCBI Gene:57523Re-query CCDS DB by CCDS ID:45090.1See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 45090.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000382554.4 ENSP00000371994.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000382554.4Link to Ensembl Protein Viewer:ENSP00000371994.3Re-query CCDS DB by Nucleotide ID:ENST00000382554Re-query CCDS DB by Protein ID:ENSP00000371994
Original member Current member NCBI NM_025081.3 NP_079357.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_025081.3Link to Protein Sequence:NP_079357.2Re-query CCDS DB by Nucleotide ID:NM_025081Re-query CCDS DB by Protein ID:NP_079357Link to BLAST:NP_079357.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_079357.2 1898 Q9P2P1-1 1898 100% 0 0

Chromosomal Locations for CCDS 45090.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 24399247 24399444 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24407869 24408527 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24408652 24410208 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24411076 24411206 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24411354 24411450 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24412997 24413098 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24413316 24413417 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 24414596 24417446 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (5697 nt):
ATGCTCCTGTCTGGGGGCGATCCTCCGGCGCAGGAATGGTTCATGGTGCAGACAAAATCGAAGCCTCGGG
TGCAGCGGCAGCGGCTGCAAGTGCAGCGCATCTTTAGGGTCAAGCTGAACGCCTTCCAGAGCCGCCCGGA
CACCCCCTACTTCTGGCTACAGCTCGAGGGGCCCCGAGAGAACATGGGCAAAGCCAAGGAATACCTGAAG
GGCCTGTGCAGCCCAGAGCTGTGGAAAGAGGTTCGCTACCCACCGATCCTGCACTGTGCCTTCCTTGGGG
CCCAAGGCCTCTTCCTGGACTGCCTCTGCTGGAGCACCCTTGCCTACCTGGTGCCTGGCCCCCCTGGCTC
CCTGATGGTGGGCGGGCTGACTGAGTCTTTCATCATGACACAGAACTGGCTGGAGGAGCTGGTGGGGCGA
CTGCGCTGGGGCCCTGCCCCTCTGCTGACCCCCCGGGGGATCTGGGAGGCTGAGGTGACCCGGGCCTTTG
GGGCCCTGGTCTGGATCCGTGGTGACCAGCATGCAGGGGACCTACTGCAGCTGCCCCCAGCGGTCCAGGA
GCTGCTGCTGAGCCTGGTGCGGGATGCTGCGGGCAAGGAAGACATCATCGAGTGGCTCAGCCGCTTCGGC
ATCTCTGACTCCCACTCCGATCCGGAGGTTCTAATCTGCCCTCCCCAGCAGCAGAAGGAAGCCCCAGCCA
TGGTGTCCGTGGGAGAGAGTCCTGGACCCTTTGTGGACATGGGGACCCTCCAGAACAGGGGCCCAGAAAA
TTCAAAGAGATTATCTAGCCTGGGAGCCACTGGGTCCCTGATCACAGCCCAGAGCACACCGCAGGAGGCA
GCAAACCAGCTGGTACGGGTCGGTTCCAACAACCAAGATGGTATGGACAGTGCTCAAGAGGAAGGGACAG
TGCAAGCCACCAGCAGCCAGGACTCCACGAACCACACACAAGCCTTGTTGAAGCAAAGGCAGGTCCAGAA
GATAGAAGATAAACTCCTCTTCCAACCTCCAGTATCAGCCCTGGGTGTGTGCCCACCCTGGAAGGCCTGG
ACCCCGGGGCCAGCCTTTGGGCCATTGTGGCCGGGGGCTATTGCTGCAACCTTCTGGAGGATCAATGAGC
TGCATTCTCTACATCTGGCCTGGCTCCTGTCCCAGGCGTGCTTCAATTTCCCCTTCTGGCAGAGACCTCT
GGGCCCCATTCAGTTGAAGCTGCCAGGGCAGAATCCTTTGCCCTTAAATCTGGAGTGGAAGCAGAAGGAG
CTGGCTCCTCTGCCTAGTGCAGAAAGCCCAGCTGGTAGACCAGATGGGGGGCTGGGAGGAGAAGCAGCCC
TGCAGAATTGCCCAAGGCCAGAGATTTCCCCAAAAGTTACGAGTTTATTGGTGGTCCCTGGGAGCTCAGA
TGTAAAAGACAAAGTTAGCTCGGATCTCCCACAGATAGGGCCACCCTTGACCTCTACACCCCAACTACAG
GCTGGAGGTGAGCCGGGGGATCAAGGGAGTATGCAGTTAGATTTTAAGGGACTGGAAGAGGGACCCGCTC
CAGTGCTGCCAACAGGGCAAGGGAAGCCCGTGGCTCAAGGGGGGCTGACAGATCAGTCAGTACCTGGAGC
TCAAACAGTGCCTGAAACTCTCAAAGTGCCCATGGCTGCAGCAGTGCCCAAAGCTGAAAATCCCTCCAGA
ACTCAAGTGCCATCTGCAGCTCCCAAACTGCCTACATCTCGAATGATGCTGGCAGTGCACACAGAGCCTG
CAGCTCCCGAAGTGCCTTTGGCTCCAACAAAGCCAACAGCTCAACTGATGGCCACAGCTCAAAAAACAGT
TGTGAATCAACCAGTGTTGGTAGCTCAAGTGGAACCCACAACTCCAAAAACTCCCCAGGCTCAGAAGATG
CCTGTAGCAAAAACATCACCTGCAGGTCCCAAAACACCCAAAGCTCAAGCCGGGCCTGCAGCTACAGTTT
CCAAAGCACCTGCAGCTTCCAAAGCACCTGCAGCTCCCAAAGTACCTGTGACCCCCAGAGTCTCCAGAGC
TCCCAAAACACCTGCAGCTCAGAAGGTGCCCACGGATGCAGGGCCAACCTTGGATGTAGCCAGACTTCTG
AGTGAGGTCCAGCCTACATCAAGGGCTAGTGTCTCCTTACTGAAGGGCCAGGGGCAGGCTGGAAGGCAGG
GTCCCCAGTCCAGTGGCACCTTGGCCCTCAGCAGTAAGCACCAGTTTCAGATGGAGGGGCTCCTGGGGGC
TTGGGAGGGGGCCCCAAGGCAGCCACCTCGCCACCTGCAAGCGAACAGCACAGTGACCAGCTTCCAGAGG
TACCACGAGGCCCTGAATACACCCTTCGAGCTGAACCTGTCAGGGGAACCTGGAAACCAGGGGTTGCGGC
GAGTGGTCATCGATGGCAGCAGTGTGGCCATGGTGCATGGCCTGCAGCACTTCTTCTCCTGCCGAGGAAT
TGCCATGGCAGTGCAGTTTTTCTGGAACCGGGGACACCGAGAGGTCACTGTGTTTGTACCCACCTGGCAG
CTGAAGAAGAACCGGAGGGTGAGAGAGAGCCACTTTCTGACGAAGCTACACTCGCTCAAGATGCTTTCAA
TCACACCCTCCCAGCTTGAGAATGGCAAGAAGATCACCACCTACGATTATAGGTTCATGGTAAAGCTGGC
AGAGGAGACAGATGGCATCATTGTCACCAATGAGCAGATTCACATCCTGATGAATAGTTCCAAGAAACTG
ATGGTCAAAGATCGCTTGCTGCCTTTCACCTTTGCGGGGAATCTCTTCATGGTGCCTGATGACCCCCTGG
GCCGTGATGGCCCCACCTTGGATGAGTTTCTGAAGAAGCCAAACAGGTTGGACACTGACATTGGCAACTT
CCTGAAGGTGTGGAAGACCCTTCCTCCCAGCTCAGCCAGTGTCACTGAGCTGAGTGATGACGCTGACTCT
GGGCCCCTGGAGAGTCTGCCGAATATGGAAGAAGTCAGGGAAGAGAAGGAGGAGAGGCAGGATGAGGAGC
AGAGACAGGGGCAGGGCACACAGAAGGCGGCTGAGGAGGACGACCTTGACTCTTCGCTGGCGTCAGTGTT
CAGGGTGGAGTGCCCGTCCCTTTCGGAGGAGATCCTGCGGTGCCTCAGCCTCCATGATCCCCCTGATGGG
GCCCTGGACATCGACCTCCTGCCAGGGGCAGCTTCTCCCTACCTGGGCATCCCCTGGGATGGAAAGGCTC
CCTGCCAGCAGGTTCTTGCCCACCTGGCCCAGCTCACCATCCCCAGCAACTTCACCGCACTCTCCTTCTT
CATGGGCTTCATGGACTCCCACAGGGATGCCATCCCTGACTATGAAGCCCTAGTGGGCCCCCTGCACAGC
CTCCTCAAGCAGAAGCCTGACTGGCAGTGGGACCAGGAGCATGAGGAGGCCTTCCTGGCCCTGAAGCGAG
CCCTGGTGTCTGCCCTCTGCCTGATGGCCCCCAACTCCCAGCTGCCCTTCCGCCTGGAGGTGACCGTGAG
CCACGTGGCCCTGACGGCCATCCTCCATCAGGAGCACTCAGGGAGGAAGCACCCCATAGCCTATACCTCA
AAACCCCTCCTCCCTGATGAGGAGAGCCAGGGCCCCCAGTCAGGGGGTGACAGCCCCTATGCTGTGGCCT
GGGCCCTCAAGCATTTTTCCCGCTGCATTGGAGACACCCCGGTGGTCCTGGACCTTTCCTATGCCTCCCG
GACCACTGCGGACCCTGAGGTGCGGGAGGGCCGCAGGGTTTCCAAAGCTTGGTTGATCCGATGGTCCCTC
TTGGTTCAGGACAAAGGCAAGAGGGCCCTGGAATTGGCCCTCCTCCAGGGCCTGCTGGGGGAGAACCGCC
TGCTCACCCCCGCGGCCTCCATGCCTCGCTTCTTCCAGGTTCTGCCGCCTTTCTCTGACCTGTCCACGTT
CGTCTGCATCCACATGTCGGGCTACTGCTTCTACCGTGAGGATGAGTGGTGTGCTGGCTTTGGTCTCTAT
GTTCTATCGCCCACCAGCCCCCCTGTCTCCCTTTCCTTCTCCTGCTCCCCTTACACGCCAACCTATGCCC
ACCTGGCAGCCGTGGCCTGCGGCCTGGAGCGCTTTGGCCAGTCCCCACTCCCAGTGGTTTTCCTCACTCA
CTGCAACTGGATCTTCAGCCTCCTGTGGGAGCTCCTGCCCCTCTGGAGGGCTCGGGGCTTCCTCTCCTCT
GATGGGGCTCCACTCCCTCACCCAAGCCTGCTCTCCTACATTATATCCCTCACCTCTGGCCTCTCATCCC
TTCCGTTTATCTACCGAACCTCCTACCGGGGCTCTCTGTTTGCTGTGACAGTGGACACCCTGGCCAAGCA
GGGTGCCCAGGGGGGTGGGCAGTGGTGGAGTTTGCCAAAGGATGTGCCAGCCCCTACAGTGAGTCCCCAT
GCCATGGGCAAGAGGCCCAATTTGCTGGCATTACAGCTGAGTGACAGCACCCTGGCCGACATCATTGCCA
GGCTGCAGGCTGGGCAGAAACTGTCTGGCTCCTCACCGTTTAGTTCTGCCTTTAACTCACTCAGCCTCGA
CAAGGAGAGTGGCCTGCTTATGTTCAAGGGAGATAAGAAGCCCAGGGTCTGGGTAGTCCCGACGCAACTC
CGGAGGGATCTGATTTTCTCTGTGCATGACATTCCCTTGGGGGCCCACCAGAGGCCCGAAGAGACCTACA
AGAAGTTGCGTTTGCTGGGGTGGTGGCCTGGGATGCAGGAGCATGTGAAAGATTACTGCAGGAGCTGCTT
GTTCTGCATCCCCCGAAATCTCATAGGCAGCGAGTTGAAGGTTATTGAGTCCCCATGGCCCCTCAGGTCG
ACCGCCCCCTGGTCGAACCTGCAGATCGAGGTGGTGGGCCCGGTCACCATAAGTGAGGAGGGCCATAAGC
ATGTACTTATTGTGGCTGACCCAAACACCAGGTGGGTGGAGGCATTCCCCCTGAAGCCCTACACACACAC
GGCTGTGGCCCAGGTGCTGCTTCAGCATGTGTTTGCAAGGTGGGGTGTTCCTGTGAGGCTGGAGGCAGCC
CAGGGGCCCCAGTTTGCCCGGCACGTCCTTGTGAGCTGTGGGCTGGCCCTGGGAGCCCAGGTGGCCTCCC
TGAGTCGGGACCTCCAGTTCCCCTGCCTGACGAGCTCAGGGGCCTACTGGGAATTCAAGAGGGCCCTCAA
GGAGTTCATCTTCCTGCATGGGAAGAAGTGGGCGGCCTCCCTGCCTTTGCTGCACCTGGCCTTCAGGGCC
TCCTCCACTGATGCCACACCGTTCAAGGTCCTGACCGGGGGTGAGTCAAGGCTCACGGAGCCCCTGTGGT
GGGAGATGAGCAGCGCAAACATTGAAGGGCTCAAGATGGACGTCTTCCTGCTACAGCTGGTGGGGGAGCT
GCTGGAGCTCCACTGGAGGGTGGCTGACAAGGCGAGTGAAAAGGCCGAGAACAGGCGTTTCAAGCGGGAG
AGCCAGGAGAAGGAGTGGAATGTGGGTGACCAGGTCCTTTTGCTGTCCCTCCCCAGGAATGGCAGCAGTG
CCAAATGGGTGGGTCCCTTCTATATCGGGGACCGGCTGAGCCTGTCACTCTATAGGATATGGGGCTTCCC
AACCCCAGAGAAGCTGGGGTGCATCTATCCCAGCAGTCTGATGAAGGCCTTTGCCAAGAGTGGCACCCCG
CTGTCCTTCAAGGTCTTGGAGCAGTGA

Translation (1898 aa):
MLLSGGDPPAQEWFMVQTKSKPRVQRQRLQVQRIFRVKLNAFQSRPDTPYFWLQLEGPRENMGKAKEYLK
GLCSPELWKEVRYPPILHCAFLGAQGLFLDCLCWSTLAYLVPGPPGSLMVGGLTESFIMTQNWLEELVGR
LRWGPAPLLTPRGIWEAEVTRAFGALVWIRGDQHAGDLLQLPPAVQELLLSLVRDAAGKEDIIEWLSRFG
ISDSHSDPEVLICPPQQQKEAPAMVSVGESPGPFVDMGTLQNRGPENSKRLSSLGATGSLITAQSTPQEA
ANQLVRVGSNNQDGMDSAQEEGTVQATSSQDSTNHTQALLKQRQVQKIEDKLLFQPPVSALGVCPPWKAW
TPGPAFGPLWPGAIAATFWRINELHSLHLAWLLSQACFNFPFWQRPLGPIQLKLPGQNPLPLNLEWKQKE
LAPLPSAESPAGRPDGGLGGEAALQNCPRPEISPKVTSLLVVPGSSDVKDKVSSDLPQIGPPLTSTPQLQ
AGGEPGDQGSMQLDFKGLEEGPAPVLPTGQGKPVAQGGLTDQSVPGAQTVPETLKVPMAAAVPKAENPSR
TQVPSAAPKLPTSRMMLAVHTEPAAPEVPLAPTKPTAQLMATAQKTVVNQPVLVAQVEPTTPKTPQAQKM
PVAKTSPAGPKTPKAQAGPAATVSKAPAASKAPAAPKVPVTPRVSRAPKTPAAQKVPTDAGPTLDVARLL
SEVQPTSRASVSLLKGQGQAGRQGPQSSGTLALSSKHQFQMEGLLGAWEGAPRQPPRHLQANSTVTSFQR
YHEALNTPFELNLSGEPGNQGLRRVVIDGSSVAMVHGLQHFFSCRGIAMAVQFFWNRGHREVTVFVPTWQ
LKKNRRVRESHFLTKLHSLKMLSITPSQLENGKKITTYDYRFMVKLAEETDGIIVTNEQIHILMNSSKKL
MVKDRLLPFTFAGNLFMVPDDPLGRDGPTLDEFLKKPNRLDTDIGNFLKVWKTLPPSSASVTELSDDADS
GPLESLPNMEEVREEKEERQDEEQRQGQGTQKAAEEDDLDSSLASVFRVECPSLSEEILRCLSLHDPPDG
ALDIDLLPGAASPYLGIPWDGKAPCQQVLAHLAQLTIPSNFTALSFFMGFMDSHRDAIPDYEALVGPLHS
LLKQKPDWQWDQEHEEAFLALKRALVSALCLMAPNSQLPFRLEVTVSHVALTAILHQEHSGRKHPIAYTS
KPLLPDEESQGPQSGGDSPYAVAWALKHFSRCIGDTPVVLDLSYASRTTADPEVREGRRVSKAWLIRWSL
LVQDKGKRALELALLQGLLGENRLLTPAASMPRFFQVLPPFSDLSTFVCIHMSGYCFYREDEWCAGFGLY
VLSPTSPPVSLSFSCSPYTPTYAHLAAVACGLERFGQSPLPVVFLTHCNWIFSLLWELLPLWRARGFLSS
DGAPLPHPSLLSYIISLTSGLSSLPFIYRTSYRGSLFAVTVDTLAKQGAQGGGQWWSLPKDVPAPTVSPH
AMGKRPNLLALQLSDSTLADIIARLQAGQKLSGSSPFSSAFNSLSLDKESGLLMFKGDKKPRVWVVPTQL
RRDLIFSVHDIPLGAHQRPEETYKKLRLLGWWPGMQEHVKDYCRSCLFCIPRNLIGSELKVIESPWPLRS
TAPWSNLQIEVVGPVTISEEGHKHVLIVADPNTRWVEAFPLKPYTHTAVAQVLLQHVFARWGVPVRLEAA
QGPQFARHVLVSCGLALGAQVASLSRDLQFPCLTSSGAYWEFKRALKEFIFLHGKKWAASLPLLHLAFRA
SSTDATPFKVLTGGESRLTEPLWWEMSSANIEGLKMDVFLLQLVGELLELHWRVADKASEKAENRRFKRE
SQEKEWNVGDQVLLLSLPRNGSSAKWVGPFYIGDRLSLSLYRIWGFPTPEKLGCIYPSSLMKAFAKSGTP
LSFKVLEQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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