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Report for CCDS21095.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21095.1 Public Mus musculus 7 Arhgap33 23 108 98 CCDS HistoryNCBI Gene:233071Re-query CCDS DB by CCDS ID:21095.1Re-query CCDS DB by GeneID:233071See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21095.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000044338.4 ENSMUSP00000038412.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000044338.4Link to Ensembl Protein Viewer:ENSMUSP00000038412.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000044338Re-query CCDS DB by Protein ID:ENSMUSP00000038412
Original member Current member EBI ENSMUST00000207860.1 ENSMUSP00000146602.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000207860.1Link to Ensembl Protein Viewer:ENSMUSP00000146602.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000207860Re-query CCDS DB by Protein ID:ENSMUSP00000146602
Original member Current member EBI ENSMUST00000208538.1 ENSMUSP00000146767.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000208538.1Link to Ensembl Protein Viewer:ENSMUSP00000146767.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000208538Re-query CCDS DB by Protein ID:ENSMUSP00000146767
Original member Current member NCBI NM_001289682.1 NP_001276611.1 Accepted alive Link to Nucleotide Sequence:NM_001289682.1Link to Protein Sequence:NP_001276611.1Re-query CCDS DB by Nucleotide ID:NM_001289682Re-query CCDS DB by Protein ID:NP_001276611Link to BLAST:NP_001276611.1
Original member Current member NCBI NM_178252.3 NP_839983.1 Accepted alive Link to Nucleotide Sequence:NM_178252.3Link to Protein Sequence:NP_839983.1Re-query CCDS DB by Nucleotide ID:NM_178252Re-query CCDS DB by Protein ID:NP_839983Link to BLAST:NP_839983.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001276611.1 1305 Q80YF9 1305 100% 0 0
NP_839983.1 1305 Q80YF9 1305 100% 0 0

Chromosomal Locations for CCDS 21095.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 30522588 30523846 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 30523944 30524588 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 30525955 30526029 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 30526114 30526259 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 30526347 30526500 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 30527142 30527287 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 30528280 30528387 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 30528470 30528552 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 30528654 30528798 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 30529716 30529818 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 30529895 30530047 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 30530136 30530195 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 30530276 30530342 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 30530425 30530502 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 30530586 30530708 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 30531524 30531616 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 30532079 30532216 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 30532320 30532400 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 30532760 30532844 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 30532935 30533032 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 30534103 30534180 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3918 nt):
ATGCTCCAGGCACAGAAACAGTCAGATCCCATCCTGCCTTGGGGAGCTTCATGGGCTGGCAGGGGACAGA
CTCTGAGGGCCCGCAGCACTGACAGCCTGGATGGCCCAGGGGAGGGCTCAGTGCAGCCCGTACCCACTAC
TGGGGGGCCGGGTACAAAGGGGAAGCCTGGGAAGAGGCTCTCAGCTCCTCGAGGCCCTTTCCCCCGGCTG
GCTGACTGTGCCCATTTCCACTATGAGAATGTTGACTTTGGCCACATTCAGCTCCTGCTGTCTCCAGAGC
GTGAGGGCCCCAGCCTCTCTGGAGAAAATGAGCTGGTCTTTGGGGTACAGGTGACCTGTCAGGGCCGCTC
CTGGCCAGTCCTCCGGAGCTATGACGATTTCCGTTCTCTGGATGCCCATCTCCACCGGTGCATATTTGAC
CGGAGATTTTCCTGCCTCCCAGAGCTCCCTCCACCTCCAGAGGGTACCAGGGCTGCCCAGATGCTGGTAC
CGCTGCTGCTGCAGTACCTGGAGACCCTGTCAGGACTGGTGGACAGTAACCTCAACTGTGGACCTGTGCT
CACTTGGATGGAGCTGGACAACCATGGCCGGCGCCTGCTCCTCAGTGAGGAAGCCTCCCTCAATATCCCT
GCTGTGGCTGCTGCCCACGTGGTCAAGCGGTACACTGCCCAGGCGCCAGATGAGCTGTCCTTTGAGGTGG
GAGACATTGTCTCAGTGATCGACATGCCACCTACAGAGGATCGGAGCTGGTGGCGGGGCAAACGGGGCTT
CCAGGTTGGTTTCTTCCCCAGTGAGTGTGTGGAACTCTTCACGGAGAGGCCAGGGCCTGGCCTAAAGGCA
GATGCTGACAGTCCCCTGTGTGGCATCCCAGCTCCCCAGGGCATCTCTTCTCTGACCTCAGCTGTGCCCC
GGCCACGTGGGAAGCTGGCAGGACTCCTCCGCACCTTCATGCGCTCTCGTCCTTCTCGCCAGCGGCTGCG
CCAACGGGGAATCCTGCGGCAGAGGGTGTTTGGTTGTGATCTTGGAGAGCACCTCAGCAACTCAGGCCAA
GACGTGCCCCAAGTGCTGCGCTGCTGCTCTGAGTTTATTGAGGCCCATGGTGTGGTGGATGGAATCTACA
GGCTCTCTGGCGTGTCCTCCAACATCCAGAGGCTTCGGCATGAGTTTGATAGTGAGAGGATCCCTGAGCT
GTCTGGCCCCGCCTTCCTACAAGATATCCACAGTGTGTCCTCCCTCTGCAAGCTCTACTTCCGGGAACTG
CCCAACCCCTTGCTCACCTACCAGCTCTATGGGAAGTTCAGTGAGGCTATGTCAGTGCCTGGGGAGGAAG
AACGCCTAGTGCGAGTGCATGACGTCATCCAGCAGCTGCCTCCACCACACTACAGGACCCTGGAGTACCT
GCTGAGGCACCTGGCCCGCATGGCAAGACACAGCGCTAACACCAGCATGCATGCCCGCAACCTGGCCATT
GTCTGGGCACCCAACCTGCTACGGTCTATGGAACTGGAGTCGGTGGGGCTGGGTGGGGCAGCCGCCTTCC
GGGAGGTCCGGGTGCAGTCGGTGGTGGTGGAGTTCCTGCTTACCCACGTGGAGGTTCTGTTCAGCGATAC
GTTCACCTCTGCTGGCCTGGACCCTGCAGGTCGCTGCCTCCTTCCCAGACCCAAGTCCCTTGCGGGGAGC
AGTCCCTCCACTCGCCTGCTAACACTGGAAGAAGCCCAGGCACGAACTCAGGGCCGTCTTGGAACACCTA
CAGAGCCCACGACTCCTAAGACGCCAGCCTCACCAGTGGAAAGGAGGAAAAGAGAGAGGGCGGAGAAACA
AAGGAAGCCAGGAGGTAGCAGCTGGAAGACATTCTTTGCTCTGGGGCGGGGCCCCAGCATACCCCGGAAG
AAGCCGCTGCCATGGCTGGGTGGCAGCCGAGCCCCACCACAGCCTTCAGGCAGCAGACCTGACACTGTCA
CGCTGAGATCTGCCAAAAGTGAGGAGTCTCTGTCATCCCAGGCCAGCGGGGCTGGCCTCCAGAGGCTGCA
CCGGCTGCGACGACCCCACTCCAGCAGCGATGCTTTTCCCGTGGGCCCAGCACCTGCTGGCTCTTGCGAG
AGCTTGTCCTCTTCTTCTTCCTCTTCTTCCTCTTCCTCCTCCTCCTCCTCCTCAGAGTCTTCAGCAGGTG
GCCTGGGGCCACTCTCTGGCTCCCCCTCACACCGCACCTCAGCCTGGCTAGATGATGGCGATGATCTGGA
TTTCAGTCCACCCCGCTGTCTGGAAGGACTTCGGGGACTTGACTTTGATCCCCTTACCTTTCGCTGCAGC
AGCCCCACCCCAGGGGACCCTGCACCTCCTGCCAGCCCAGCACCTCCAGCCTCAGCCTCTGCCTTCCCAC
CTCGGGCAACCCCACAGGCTCTGTCACCCCATGGACCCACTAAGCCTGCTTCACCCACTGCCCTGGACAT
CTCAGAGCCCCTGGCTGTATCAGTACCACCTGCTGTCCTGGAACTACTGGGAGCTGGAGGAACGCCTGCC
TCAGCCACCCCAACACCGGCTCTCAGCCCTCATCTCATCCCCCTGCTGCTGCGTGGAGCTGAGGCCCAGC
TAAGTGACACCTGTCAGCAGGAGATCAGCAGCAAGCTAGCACCAACCCGGGGAGCTCCAGGCCAGCAAAG
TCCTGGCGGCATGGATTCACCGTTATTGCCCCCACCCTTGCCTCTGCTGCGCCCTGGTGGGGCTCCGCCC
CCTCCCCCCAAGAACCCAGCTCGTCTCATGGCCCTGGCCTTGGCTGAGCGAGCTCAGCAGGTAGCAGAGC
AACAGAGCCAACAAGAGCAGGGGGGCACCCCACCTGCTCCCCACTCCCCCTTTCGACGCTCTCTGTCCCT
AGAGGTGGGTGGGGAGCCTGTGGGGACTTCAGGGAGTGGGATACACCCTCCCTCCTTAGCTCACCCAGGT
GCCTGGGCTCCAGGTCCCCCACCTTACCTCCCAAGGCAACAGAGTGATGGGAGCCTGGTAAGAAGCCAGC
GGCCCTTGGGGACCTCAAGGAGAAGTCCCAGAGGGCCTTCCCAGGTCAGTGCCCATCTCAGGGCAAGCGG
GGCTTACAGGGATGCTCCAGAGATGGCAGCCCAGTCACCATGTTCTGTCCCCTCACAGGGTTCTAACCCC
AGCTTCTTCTCAACCCCCCGAGAGTGTTTGCCACCTTTCCTTGGCGTCCCCAAACAAGGCTTGTACTCTC
TGGGACCCCCATCCTTCCCACCTAGCTCTCCAGCCCCAGTCTGGAGGAACTCTCTGGGTGCCCCCTCAGC
ATTGGACAGGGGAGAGAATCTGTACTATGAAATTGGGGTAGGGGAGGGGACCTCCTACTCAGGCCCCAGC
CGGTCCTGGAGTCCGTTTCGCTCCATGCCTCCCGACAGGCATAATGCCTCCTATGGTATGCTTGGCCAGT
CACCACCGCTCCACAGGTCCCCTGATTTCCTGCTCAGCTACCCGCCTCCCCCCTCCTGCTTTCCCCCAGA
GCACCTTACCCACTCAGTTTCACAGCGCCTTGCCCGGCGCCCTACCCGTCCTGAGCCCCTCTATGTCAAC
CTAGCCCTAGGGCCCAGGGGCCCTTCACCTGCCTCTTCTTCCTCTTCCTCTCCTCCTGCCCACCCCAGGA
GCCGGTCAGATCCTGGGCCTCCTGTTCCCCGCCTCCCTCAGAAACAGCGGGCTCCTTGGGGTCCACATAC
TCCCCATCGGGTGCCTGGACCTTGGGGTTCCCCCGAACCTTTTCTGCTCTATAGGCCAGCTCCACCATCC
TATGGGAGGGGAGGGGAGGTCCGAGGATCCTTGTACAGAAATGGAGGACATAGAGGAGAGGGGGCTGGTC
CCCCTCCTCCTTACCCCACACCCAGCTGGTCCTTACATTCAGAAGGACAGACCAGAAGTTACTGCTGA

Translation (1305 aa):
MLQAQKQSDPILPWGASWAGRGQTLRARSTDSLDGPGEGSVQPVPTTGGPGTKGKPGKRLSAPRGPFPRL
ADCAHFHYENVDFGHIQLLLSPEREGPSLSGENELVFGVQVTCQGRSWPVLRSYDDFRSLDAHLHRCIFD
RRFSCLPELPPPPEGTRAAQMLVPLLLQYLETLSGLVDSNLNCGPVLTWMELDNHGRRLLLSEEASLNIP
AVAAAHVVKRYTAQAPDELSFEVGDIVSVIDMPPTEDRSWWRGKRGFQVGFFPSECVELFTERPGPGLKA
DADSPLCGIPAPQGISSLTSAVPRPRGKLAGLLRTFMRSRPSRQRLRQRGILRQRVFGCDLGEHLSNSGQ
DVPQVLRCCSEFIEAHGVVDGIYRLSGVSSNIQRLRHEFDSERIPELSGPAFLQDIHSVSSLCKLYFREL
PNPLLTYQLYGKFSEAMSVPGEEERLVRVHDVIQQLPPPHYRTLEYLLRHLARMARHSANTSMHARNLAI
VWAPNLLRSMELESVGLGGAAAFREVRVQSVVVEFLLTHVEVLFSDTFTSAGLDPAGRCLLPRPKSLAGS
SPSTRLLTLEEAQARTQGRLGTPTEPTTPKTPASPVERRKRERAEKQRKPGGSSWKTFFALGRGPSIPRK
KPLPWLGGSRAPPQPSGSRPDTVTLRSAKSEESLSSQASGAGLQRLHRLRRPHSSSDAFPVGPAPAGSCE
SLSSSSSSSSSSSSSSSSESSAGGLGPLSGSPSHRTSAWLDDGDDLDFSPPRCLEGLRGLDFDPLTFRCS
SPTPGDPAPPASPAPPASASAFPPRATPQALSPHGPTKPASPTALDISEPLAVSVPPAVLELLGAGGTPA
SATPTPALSPHLIPLLLRGAEAQLSDTCQQEISSKLAPTRGAPGQQSPGGMDSPLLPPPLPLLRPGGAPP
PPPKNPARLMALALAERAQQVAEQQSQQEQGGTPPAPHSPFRRSLSLEVGGEPVGTSGSGIHPPSLAHPG
AWAPGPPPYLPRQQSDGSLVRSQRPLGTSRRSPRGPSQVSAHLRASGAYRDAPEMAAQSPCSVPSQGSNP
SFFSTPRECLPPFLGVPKQGLYSLGPPSFPPSSPAPVWRNSLGAPSALDRGENLYYEIGVGEGTSYSGPS
RSWSPFRSMPPDRHNASYGMLGQSPPLHRSPDFLLSYPPPPSCFPPEHLTHSVSQRLARRPTRPEPLYVN
LALGPRGPSPASSSSSSPPAHPRSRSDPGPPVPRLPQKQRAPWGPHTPHRVPGPWGSPEPFLLYRPAPPS
YGRGGEVRGSLYRNGGHRGEGAGPPPPYPTPSWSLHSEGQTRSYC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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