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Report for CCDS26949.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
26949.1 Public Mus musculus 14 Rgr 23 108 98 CCDS HistoryNCBI Gene:57811Re-query CCDS DB by CCDS ID:26949.1See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 26949.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000022338.6 ENSMUSP00000022338.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000022338.6Link to Ensembl Protein Viewer:ENSMUSP00000022338.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000022338Re-query CCDS DB by Protein ID:ENSMUSP00000022338
Original member Current member NCBI NM_021340.4 NP_067315.1 Accepted alive Link to Nucleotide Sequence:NM_021340.4Link to Protein Sequence:NP_067315.1Re-query CCDS DB by Nucleotide ID:NM_021340Re-query CCDS DB by Protein ID:NP_067315Link to BLAST:NP_067315.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_067315.1 291 Q9Z2B3 291 100% 0 0

Chromosomal Locations for CCDS 26949.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 37038236 37038367 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 37038855 37038968 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 37042573 37042690 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 37044576 37044729 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 37045705 37045826 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 37046841 37046997 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 37048849 37048927 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (876 nt):
ATGGCAGCAACCAGGGCCCTGCCTGCTGGTTTGGGGGAACTTGAGGTGCTGGCTGTAGGAACAGTCCTGC
TGATGGAAGCGCTCTCTGGCATCAGCCTCAATGGCCTGACCATCTTCTCTTTCTGCAAGACTCCAGATCT
GCGGACTCCCAGCAACCTGCTGGTACTGAGCCTGGCCCTGGCAGACACTGGGATCAGCCTGAATGCCCTT
GTTGCAGCGGTATCCAGCCTCCTCCGGCGCTGGCCACATGGTTCAGAGGGCTGCCAGGTTCATGGTTTCC
AGGGATTTGCAACAGCACTGGCCAGCATCTGTGGCAGTGCAGCCGTTGCCTGGGGACGTTATCACCACTA
CTGCACCCGCAGACAGTTGGCATGGGACACGGCCATCCCTCTGGTGCTGTTTGTGTGGATGTCATCTGCC
TTCTGGGCATCCCTGCCCCTGATGGGCTGGGGCCACTATGACTATGAGCCTGTGGGGACATGCTGTACAC
TGGACTATTCGAGGGGTGACAGAAACTTCATCAGTTTTCTCTTCACCATGGCTTTTTTCAACTTCCTCGT
ACCCCTGTTCATCACACACACTTCATACCGGTTCATGGAGCAGAAATTCTCCAGGAGTGGCCATCTCCCG
GTGAATACTACTCTTCCAGGCAGAATGCTGCTGCTTGGCTGGGGCCCCTATGCCCTCCTGTACCTATACG
CAGCCATCGCAGATGTGAGCTTCATCTCTCCTAAACTACAGATGGTGCCTGCTCTCATCGCCAAAACCAT
GCCCACAATCAACGCCATCAACTATGCGTTGCACAGGGAGATGGTCTGTAGAGGAACCTGGCAGTGTCTG
TCTCCACAAAAAAGCAAGAAGGACCGAACCCAGTGA

Translation (291 aa):
MAATRALPAGLGELEVLAVGTVLLMEALSGISLNGLTIFSFCKTPDLRTPSNLLVLSLALADTGISLNAL
VAAVSSLLRRWPHGSEGCQVHGFQGFATALASICGSAAVAWGRYHHYCTRRQLAWDTAIPLVLFVWMSSA
FWASLPLMGWGHYDYEPVGTCCTLDYSRGDRNFISFLFTMAFFNFLVPLFITHTSYRFMEQKFSRSGHLP
VNTTLPGRMLLLGWGPYALLYLYAAIADVSFISPKLQMVPALIAKTMPTINAINYALHREMVCRGTWQCL
SPQKSKKDRTQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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